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LOCUS XM_017157441 5906 bp mRNA linear INV 09-DEC-2024 subunit beta (LOC108068058), transcript variant X6, mRNA. ACCESSION XM_017157441 VERSION XM_017157441.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017157441.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5906 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..5906 /gene="LOC108068058" /note="ral GTPase-activating protein subunit beta; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108068058" CDS 421..5718 /gene="LOC108068058" /codon_start=1 /product="ral GTPase-activating protein subunit beta isoform X6" /protein_id="XP_017012930.2" /db_xref="GeneID:108068058" /translation="MYSEWASLSAQISANSCGAQCFSVLNKFPASAGREVVVSVVKQL GTNLGITQNAEPSHLVKDEEVKWCMDVICFGLSLPLQEHETIKDCVNVYCEWLTALHP QPRISVPKPICEDANLYARQIINHFHNLFVPRQGEILPFLYQTTLGADTIKRQAVLCH RVLRTLQQTAQISQLMDRQTWDTLLLFLLAINEILLAPPTVKDDVGDQLCERVLSVLF EVWLLACVRSFPSPSMWKTLQESCAMWRHRVALVDQWNRVNLALTARLLEFSYGPAFP QLKNADEDGQLIPVGMSNDCVAQTWYRFLRMIGNPTALCSPHIISKSSHFVQWALTHE KGAETHQHPCLQQLPQIFLNAMKGISSQVDAFLGVYQPPPQQTDGVVTNLLEIRHSLN EATSSTLQQFIHSSSATNIATQQANHSHHHHHHLHYPHLHLHGAGSFLRDNFMSNSAS SALNAIMGHHGGHHHQQNHHQQQQQQLQISASPTSSLAAVGSTSAGGSHSAGVVGSIS FGTTTAAGESSTSATPTPPLQRRLAKSFSVAPTITQQKGLSKTSLIGLTGGSGGGARN AISGSSSTNASSTTTAASGTSGASSSATASASSLSTVTIGGSGGAGISAGGPGIPGST ATGAGGGSAPAPAPTTPTSTSGPPSASSSINSLPLTSMGAGVELAVARPKCNSILHVF HEWLFEAAHIGGDTWRQNRKKQACEASKRPSSMIMEHRKGSISLSQPNSLNDPQSLPP TLTIDKYESGRAEAIGTLCKIFCAKKTGEEILPVYLARFYMALQQCLKITESRECDET LASILLHSSDLFRLDLDGINVLLPGFIAALEIVLPDKDLKLKTQSMVFNRTELRRSAI NILLSIMVLPLHYQTLPIRDLTSETSEKMFTFIQLKSRLMNILMNALQVETDAQNTHM LLGGLLLCVQDAVTFEETELGGNASLSHNSSGVQHHEANLLSSACSERSASLVSAGTA SLGGQTTATMGAGSGSIRDTASAHDYPSLTISDDMSFEFGQELEGVTSYDNAHALFVR ATYLVCHRLISSWKTDLNVSLAALELLSGLARLHIRETDALECKRAVKWICDYICYQC SRPPPAHSKDLHSTIVAAFQCTAAWLMQHPYLLQDKDCLQTVLEVVELGISGTKSQSK GTDIPKFKDEKELKPASMRVRDAAENLLTIILEQVGYFPSECGPESISSLLDELALMK HCNSMVPAAAASSEQAIAKFKYFVTENSTILALLEEPLGNDQDPQPTVTLLIRGPFGR HAWTMQLRHLPRSKSGIKYHAINPGRPIPMNDVTQRPDCEQKNFPDGVDKVQPCVADY SIPTIEQMREQYGTASIRELEAMLENQSIHEKLAWAEADTSADSLSHAQECVPPSVCH EFHAARLFLSHFGFLGFETRNPHNPNEALGQPPQRPLIVLDTKSTAFAADLDRLDKLS ARTHDTVYVFYVKSGQTSAQQIIANMAEEQAASHDPHFASMLQTLGWPVQVADHSGWT GFAHNSWSLKGTPEQEQQQQQQQPATNYNGSQRVLYWADVSSEIAFVVPTTWNLRYNS DTSDGGSISSTDQITAGNVWARSDAGESGPTKSKSRNLSLELDTNRMTKEPVPPTRRK GNVTKPTLLAQAPAKIFLVWLESYEDYLNFPLEDVLAYTRTGEELHTLQLPRANDCHV IFVHSLLSGLLRVKLQGPPGRMSFATPLVDGMVLSRRVVGNLVRQTALNISRRRRLDN DNYQPPHVRRRLKVQDIVQKYKMDLSEAELLAHLFQRAI" misc_feature 874..1239 /gene="LOC108068058" /note="RALGAPB N-terminal domain; Region: RALGAPB_N; pfam20412" /db_xref="CDD:466561" polyA_site 5906 /gene="LOC108068058" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 agctgttcac atcgctccgt ctcgctcgca cgcttttcgc tgtgctgtga atttcctctt 61 cttttttttg tgctaaacaa tttagtttaa acaaattgct gaaaaaaggg ctttaatggc 121 ggtgtaatcg aatagctgaa gtaaacaaag tgcggcataa acattggcga ttccatattt 181 gcaacatgag agcgaccaat cagcgagtga gaagcagcag cagcaacagc aacaacaaca 241 tggcgcacct gcaacaaaaa aaatcttcat gttgacgtca acaaagtgaa atccgatcga 301 aagaaacgca ccgataaagc ggcgaaagaa gagagagaga gagagggaga tagcataaac 361 tacggatagc tgggtgaaga ggaaacgcca aggaggagga gcaacccgat ccccaccagg 421 atgtactccg agtgggcctc gctgtccgcc caaatctcgg ccaacagctg cggcgcccag 481 tgcttcagtg tcctcaacaa gtttcccgcc tccgcgggac gcgaagtggt cgtctcggtg 541 gtcaagcagc tgggcaccaa tctcggcatc acccagaacg cggagcccag ccacctggtc 601 aaggacgagg aggtgaaatg gtgcatggac gtgatctgct ttggcctttc gctgccgctg 661 caggagcacg agacgatcaa ggactgcgtg aacgtctact gcgagtggct gacggcgctg 721 catccgcagc cgaggatcag tgtgccgaag ccgatctgcg aggatgccaa tctgtatgcc 781 cgccagatca tcaatcactt ccacaacctg tttgtgccgc gtcagggcga aatcttgcca 841 tttctatacc aaaccacgct tggtgccgac accattaaaa ggcaggcggt gctctgccat 901 cgggtgctgc gaaccctcca gcaaaccgcc cagatatcgc agctgatgga ccggcagacg 961 tgggacacgc tgctcctctt cctgctggcc atcaacgaga tcctgctggc cccgcccacc 1021 gtcaaggacg atgtgggcga ccagctgtgc gagcgggtgc tctcggtgct cttcgaggtc 1081 tggctgctgg cctgcgtgcg cagctttccc tcgccctcga tgtggaagac gctgcaggag 1141 tcgtgcgcca tgtggcgaca ccgcgtggcc ctcgtcgacc agtggaatcg ggtgaatctc 1201 gctttgaccg ctcgcctgct ggagttcagc tacggtcccg cctttcccca gctcaagaat 1261 gccgacgagg atggccagct gatacccgtg ggcatgtcca acgattgcgt ggcccagacc 1321 tggtaccgct tcctgcggat gatcggcaat cccacggccc tctgctcgcc gcacatcatc 1381 agcaagtcat cgcactttgt gcagtgggcc ttgacccacg agaagggcgc cgagacgcat 1441 cagcatccct gcctgcagca gctgccgcag atcttcctca atgccatgaa aggcatctcc 1501 agtcaggtgg acgcgtttct gggcgtctat cagccgccgc cgcagcaaac ggatggtgtg 1561 gtgacgaatc tgctggaaat acggcactcg ctgaatgagg ccacctcctc gaccctgcag 1621 cagttcatcc actcgagcag cgccacgaat atagcgactc agcaggcgaa ccatagccac 1681 catcaccacc accatctcca ctatcctcat ctgcatttac acggtgccgg cagctttctg 1741 cgcgacaatt tcatgagcaa ctcggccagt tcggcgctca atgccatcat gggtcaccat 1801 ggcggtcatc atcatcagca gaatcatcac cagcagcagc agcagcagct ccagatcagc 1861 gcctcgccca ccagcagttt ggcggccgtg ggcagcacga gtgccggagg cagtcactcc 1921 gccggagtcg tgggcagcat ctcctttggc accaccaccg ccgccgggga atcatccacc 1981 tcggccacgc ccacaccgcc cctgcagcga cgcctggcca agagcttcag cgtggcgccg 2041 accatcacac agcagaaggg cttgagcaag acctcgctta ttggcctcac cggcggcagc 2101 ggcggcggtg cacgcaacgc gatcagcggc agcagcagca ccaacgcctc cagcaccacc 2161 accgccgcca gcggcaccag cggtgcctcc tcctccgcca ccgcctccgc ctcctccctg 2221 tccacggtca ccatcggtgg ctctggcgga gcgggaatct ccgccggcgg cccgggaatc 2281 cccggcagca cggcaacggg cgcggggggc ggatccgctc cagctccggc gcccacaacg 2341 cccacgtcca cgtcgggtcc gccgtcggcg agcagcagca tcaactctct gccgctgact 2401 tcgatgggag cgggcgttga gctggccgtg gccaggccca agtgcaacag cattctccac 2461 gtattccacg agtggctctt cgaggcggcg cacatcggcg gcgacacttg gcgccagaac 2521 cgcaagaagc aagcatgcga ggccagtaag cgaccgtcgt cgatgataat ggagcaccgc 2581 aagggatcga tttcgctgtc gcagccgaac tcgctgaacg atccgcagtc gctgccgccc 2641 acgctgacca tcgacaagta cgagtccggc cgggcggagg ccattgggac gctgtgcaag 2701 atcttctgcg cgaagaagac gggcgaggag atcctgcccg tctacctggc tcgcttctac 2761 atggccctgc agcagtgcct aaagatcacg gagtcgcggg agtgcgacga gacgctggcc 2821 agcattctgc tccactcgag cgacctcttt cgcctggacc tcgatgggat caatgtgctg 2881 ctgccgggct tcattgccgc tttggagatc gtgctgcccg acaaggacct caagctgaag 2941 acccagtcga tggtcttcaa tcgcaccgag ctgcgccgct cggccatcaa catcctgctg 3001 tccatcatgg tgctgccgct gcactaccaa acgctgccta taagggatct caccagcgag 3061 acgagcgaga aaatgttcac cttcattcag ttgaagtcgc ggctgatgaa cattctgatg 3121 aatgccctgc aggtggagac ggatgcccag aacacgcaca tgctcctggg cggcctgctg 3181 ctctgcgtcc aggacgccgt caccttcgag gagacggaac tgggcggcaa cgccagtctt 3241 tcgcacaact ccagtggcgt gcagcaccac gaggccaatc tgctgagttc cgcctgctcg 3301 gagcgttccg cttcgctggt cagcgccggc acggccagct tgggcggcca gacgacggcc 3361 accatgggag cgggctcggg ctccattcgc gacaccgcct ccgcccacga ctatcccagc 3421 ctgaccattt ccgatgacat gtcattcgag ttcggccagg agctggaggg ggtgaccagc 3481 tatgataatg cccatgcctt atttgtgcgc gccacgtact tggtgtgtca tcggctgatc 3541 tcgtcgtgga agacggatct gaatgtctcg ctggccgcct tggagttgct ctctggcctg 3601 gccaggctgc atatccggga aacagacgct ctagagtgca agcgggccgt gaagtggatc 3661 tgcgactaca tctgctacca gtgctcccga ccgccgccgg cgcacagcaa ggatctgcac 3721 agcaccattg tcgcggcatt ccagtgcacc gccgcctggc tgatgcagca tccctatctc 3781 ctgcaggaca aggactgcct gcagacggta ctcgaggtgg tggagctggg catttcgggc 3841 accaagagcc agagcaaggg caccgatata cccaagttca aggacgagaa agaactgaag 3901 cccgcctcga tgcgggttcg cgatgcggcc gagaatctgc tgaccatcat cctcgagcag 3961 gtgggctact tccccagcga gtgcggaccc gagtcgatat cctcgctgct ggacgaactg 4021 gccctgatga agcactgcaa ctcgatggtg ccggcggcgg cggccagcag tgagcaggcc 4081 atcgccaagt tcaagtactt cgtcaccgag aactccacca tactggcgct gctcgaggag 4141 ccgctgggca atgaccagga tccccaacca acggtgacat tgctcatccg cggtcccttt 4201 ggccgacatg cctggaccat gcagctgcgc cacctgccac gcagcaaatc gggcatcaag 4261 taccatgcca tcaatccggg acgacccata cccatgaacg atgtgaccca acggccggat 4321 tgcgagcaaa agaactttcc cgacggcgtg gacaaggtgc agccctgcgt ggccgactac 4381 tccataccca caatcgagca gatgcgcgag caatacggca cggcgagtat ccgggagctg 4441 gaggcgatgc tggagaacca gagcatccac gagaagctgg cctgggcgga ggcggacacc 4501 agtgccgaca gcctgtcgca tgcccaggaa tgcgtgccgc cttccgtttg ccacgagttc 4561 catgccgctc gcctctttct ctcgcatttc ggattcctcg gctttgagac gcggaatcca 4621 cacaatccaa acgaggcact gggccagccg ccgcagcgac cgctcatcgt gctggacacc 4681 aagtccacgg ccttcgccgc cgatctggat cggctggaca agctgagtgc gcggacccac 4741 gacaccgtct atgtgttcta cgtgaagagc ggccaaacga gtgcccagca gatcatcgcc 4801 aacatggccg aggagcaggc cgccagccat gatccgcact ttgccagcat gctgcagacg 4861 ctgggctggc cggttcaggt ggcggatcac tccggctgga cgggattcgc gcacaactcg 4921 tggtcgctca agggaacgcc cgagcaggag cagcagcagc agcagcagca gccagctacc 4981 aactacaatg gctcgcagcg ggtgctctac tgggcggatg tctcctcgga gatcgccttc 5041 gtggtgccca cgacgtggaa tctgcgctac aacagcgaca ccagcgatgg tggcagcatc 5101 tcgagcacgg atcaaatcac cgctggtaat gtgtgggcac gcagcgatgc cggagaaagt 5161 ggcccaacca aatccaagtc aaggaatctc agcctcgaac tggacacgaa tcggatgacc 5221 aaggaaccgg tgccgccgac gcggcgaaag ggcaacgtaa cgaagcccac gctgctcgcc 5281 caggcgcccg caaagatctt tctggtttgg ctggagagct acgaggatta cctgaacttc 5341 ccgctggagg atgtgctggc ctacacgcgc accggcgagg agctgcacac gctgcagctg 5401 ccgcgcgcaa acgactgcca cgtgatcttc gtgcactcgc tgctctccgg gctgctccga 5461 gtgaagctgc aggggccgcc gggcaggatg agcttcgcca cgccgctggt cgatggcatg 5521 gtgctcagcc ggcgggtagt cggcaatctg gtgcgccaga cggcgctcaa catatcacgt 5581 cgccggcgtc tggacaatga caactaccaa ccgccgcatg ttagacgacg cctcaaggtg 5641 caggacattg tccagaagta caaaatggat ctgagcgagg ccgagctgct ggcccatctc 5701 ttccagcgtg caatttagcc ggcaatcgat agtattatta acccccagga ggagcagtcg 5761 tactgcatta acgtgtgctt aactaaaacc ccacaagaac tactgattcg ttaaccgaac 5821 ggagatgaac agagatcatc gtatgctaat tattattttt gctaataaat ctaattatac 5881 tttgtaaaag tatttgtaat attata