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LOCUS XM_017157433 2342 bp mRNA linear INV 09-DEC-2024 protein Gga (Gga), mRNA. ACCESSION XM_017157433 VERSION XM_017157433.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017157433.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2342 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2342 /gene="Gga" /note="ADP-ribosylation factor-binding protein Gga; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:108068055" CDS 123..2108 /gene="Gga" /codon_start=1 /product="ADP-ribosylation factor-binding protein GGA1" /protein_id="XP_017012922.2" /db_xref="GeneID:108068055" /translation="MTTDESIMEEMLERATNPAKKIDELGVQMFCIVVKSNAQLVHKA QEMIVAKVRSSNITEATRAISLLEECMTQCGDDFQDEAAKFRFLNELIRLVSKKYMGA ETPHEVKQRIMECLLLWTTEFPQRLKIRDAYDMLRKEGDIEHGTTEAAVAKRESVLGT IDEAMFAKLIKSNNPENYKRANILLQYRMAQEARRNDLLAQHRLVLSEVQETMQLLNQ MLDTYDPSNQDVSETLHELYKSCKKHKPIFQHLPQLLDDSDAQLVADTLDANGALLTT MQRYKLLVPSPTRSTAPALTTSTLTSTSSAKSTSTSSSTAAAASSNNALLLNELLGDL LISGSSSSESPPAATTNIPNTASSNSNVTAATSSSGGDPLADLSDIFSSALAESEAKL QPKQPFQNANTLLEPQVLSQNSATEGLANGNEGSKVPGTARKMPQIDMLSEELFQQIL PAQERMPSFKRDPEKLTLNDLARERMQVEAAAPIPITPLPSVPSEPVDDVPLLSEDVD KSEEVAAPVAPLPSKPLSEIHVELDNIQATGEQRIVLDDDDLQLSLNFTSDRPGHRVS VIVISAQNKSRQPVRDFQFEASVKKPCKVRLLPPTDSQMPPHKPFRPATPINQVMLLL NPTGQSVDVTCIVGYKLGDDPDPIKESIVAQGIDYVD" misc_feature 144..554 /gene="Gga" /note="VHS (Vps27/Hrs/STAM) domain of metazoan GGA (Golgi-localized, Gamma-ear-containing, Arf-binding) proteins; Region: VHS_GGA_metazoan; cd03567" /db_xref="CDD:340769" misc_feature order(147..149,159..161,174..176,258..260,270..275, 279..290,429..431) /gene="Gga" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:340769" misc_feature order(192..197,204..206,216..218,336..341) /gene="Gga" /note="putative intraprotein/interprotein binding site [polypeptide binding]; other site" /db_xref="CDD:340769" misc_feature order(372..380,387..389,414..419,504..506,525..527, 537..539) /gene="Gga" /note="acidic-cluster-dileucine motif interaction site [polypeptide binding]; other site" /db_xref="CDD:340769" misc_feature 723..971 /gene="Gga" /note="GAT domain found in eukaryotic GGAs, metazoan Tom1-like proteins, metazoan STAMs, fungal Vps27, and similar proteins; Region: GAT_SF; cl03906" /db_xref="CDD:470905" misc_feature 1788..2057 /gene="Gga" /note="Adaptin C-terminal domain; Region: Alpha_adaptinC2; smart00809" /db_xref="CDD:197886" polyA_site 2342 /gene="Gga" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cggagaaaga gcgatataga tttgtgtgcc atctcaagca acaatggttg ttgttcgaaa 61 tcaccgcaaa tattgtatat cccccagtta atgcaacata acggtattcc cgtccccgca 121 taatgacaac cgacgagagc ataatggagg agatgctgga gagagcaaca aatccggcta 181 agaaaatcga cgaactgggc gtgcaaatgt tctgcattgt ggtcaaaagc aacgcccagt 241 tggtccacaa ggcgcaggaa atgattgtgg ccaaggtgcg atcctccaat ataacggagg 301 caacgcgagc gatttcgcta ctggaggagt gcatgacgca gtgcggcgac gacttccagg 361 acgaggcggc caagttccgg ttcctgaacg aactgatccg cctggtgtcg aagaagtaca 421 tgggcgccga gacgccgcac gaggtgaagc agcggatcat ggagtgcctc ctgctgtgga 481 ccaccgagtt cccgcagcgc ctgaagatcc gcgacgccta cgacatgctg cgcaaggagg 541 gcgacatcga gcacggcacc acggaggcgg cggtggccaa gcgggagagt gtcctcggca 601 ccatcgacga ggccatgttc gccaagctga tcaagagcaa caatcccgag aactacaagc 661 gagccaacat cctgctgcag tatcggatgg cccaggaggc gcgacgcaac gatctgctgg 721 cccagcaccg tctggtcctc agcgaggtgc aggagacgat gcagctgctc aaccagatgc 781 tggacaccta cgacccctcc aaccaggacg tcagcgagac gctgcacgag ctgtacaaga 841 gctgcaagaa gcacaagccc atcttccagc atctgccgca gctgctggac gactcggatg 901 cccagctcgt agccgacacc ctggatgcca atggcgccct gctgaccacc atgcagcgct 961 acaagctact ggtgccctcg cccacgagga gcactgctcc cgccctgacc accagtactc 1021 taacatcgac atcctcggca aaaagcactt cgaccagcag ttcaactgca gcagctgcta 1081 gttccaataa tgccctgctg ctaaacgaac tgctggggga tttgctgatc agtggaagca 1141 gcagcagcga aagtccgccg gcagcaacca caaacatacc aaataccgcc agcagtaatt 1201 ccaatgttac agcagccaca tcctccagtg gtggagatcc tttggccgac ttgagtgaca 1261 tcttcagcag cgctctggcc gaaagcgaag ccaagctgca gccaaagcag ccattccaga 1321 atgccaacac cttgctggag ccgcaggttc tcagccaaaa ctccgccacc gagggattgg 1381 cgaatggcaa tgagggcagc aaagtaccgg gaacagctag aaagatgccg cagatcgata 1441 tgctcagcga ggagctcttc cagcagattc tgcccgccca ggagcgaatg cccagcttca 1501 agcgggatcc cgagaagcta acgctgaacg atttggcccg cgaacgaatg caggtggagg 1561 cagctgctcc tattcctatc acccctctcc cttctgttcc ttccgaaccg gtagatgatg 1621 ttcccctgct cagcgaggat gtggataaga gcgaagaagt ggcggctcca gtggctcccc 1681 tccccagcaa gcctctcagc gagattcacg tggaactgga caatatccag gccaccgggg 1741 agcagcgcat cgtgctggac gatgacgacc tgcagctcag tctgaacttc accagcgatc 1801 ggcccggcca tcgtgtgtcg gtgattgtga tatcggcgca gaacaagagt cgccagccag 1861 tgcgcgactt tcagttcgag gcgagcgtga aaaagccctg caaggtgcgc ctgctgccgc 1921 cgacggacag ccagatgccg ccccacaagc ccttccgccc ggccacgccc attaaccagg 1981 tgatgctcct cctgaatccc actggccagt ctgtggatgt cacctgcatc gtgggctaca 2041 agctgggcga cgatccggat cccatcaagg aatcaattgt ggcccagggc atcgactatg 2101 tggattagaa actggcctac cgtcctttta acaagacatc cgaaacgata aaagtcaatt 2161 ttcccccgtt ctattttcca gtatctaaaa gataaagatt cttaatttcc gtactgtatg 2221 tatatttatg cccgtaagat ttttattcaa attgtcgtac tataattatg tatcaaaggt 2281 ttatataaat tatgaaaaag tcgctacaaa agccaagcgc tcattttcag aggtattctc 2341 aa