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LOCUS XM_017157414 2042 bp mRNA linear INV 09-DEC-2024 (LOC108068044), transcript variant X5, mRNA. ACCESSION XM_017157414 VERSION XM_017157414.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017157414.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2042 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2042 /gene="LOC108068044" /note="YLP motif-containing protein 1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108068044" CDS 541..1917 /gene="LOC108068044" /codon_start=1 /product="uncharacterized protein isoform X5" /protein_id="XP_017012903.2" /db_xref="GeneID:108068044" /translation="MSSTSSSVLTLSSFNLLFFTQVLTVLSSTIKYNEYATDKGGNVS IPCIAQGNIMWVKEHGNNSTIIQTGRVLVLRNVSTTDAGIYVCFASVPRPSTTTSAAA AATTTSKPATSATTSPQNQQEKETQPVVDKNEDGIDEEPQVEEELEYQAQQRTRLIVR TVPGPVSQLYFKASTILGFLIWRFNKTQSGGYPVRSFTAEFRNVSYKTPPANASFEHA WSRMDPINIAFNVRQMEVYRLAPNTTYEFRIWANNELGSGEVVTTNVTTLPETKEEDL IRLIKPDLDNFDPRIWIVAVSIVLGTLVILAIGLCIVLSKECYQSAQMELQDGWDSIE LIPNIILNPGFSESDAQGQGQAGDPNGGEEGQDDDDDEDVAMPFPRTIIFGQHHRTPP PPRLHLPPPHHQQQQHHHHLQHHQYHHHRRQDEDDDDDYEEEHEPTMERFKRKVSVFF TGPTIKRI" misc_feature 655..810 /gene="LOC108068044" /note="Immunoglobulin domain; Region: Ig; cl11960" /db_xref="CDD:472250" misc_feature 667..681 /gene="LOC108068044" /note="Ig strand B [structural motif]; Region: Ig strand B" /db_xref="CDD:409358" misc_feature 694..708 /gene="LOC108068044" /note="Ig strand C [structural motif]; Region: Ig strand C" /db_xref="CDD:409358" misc_feature 790..807 /gene="LOC108068044" /note="Ig strand F [structural motif]; Region: Ig strand F" /db_xref="CDD:409358" ORIGIN 1 gcaactcgaa cgcaacggta catgaacggc ggaaagctaa cgagaatcca caagaatcca 61 gtgtcccgtt aacaacaact ctctccaaac accgaattgc agttaaatta aacaaacact 121 actgcttaaa atgcccgaaa aatcagcagc cgcattttga agttacgtca aaaggagtcg 181 cgaaagagga ggaccaagag gagaggagaa aggagggaag agaaggagca aaaataacaa 241 caaagcgaac gcacgcgata ggagtaacag taaatgtgaa aggataaaat aggagaaagt 301 agtgaaatca gcaagagaac ttttctttat tttcttcagt tttttttttt tggtttttgg 361 cgcgtcgtcg ctgtttgctt ttttgttttt attattttct ctctgtgcct gcgcctttgt 421 tgattgcttt gcagccggct ttggccaaaa gggagggggc gataaagcta ggaggagaag 481 gaggaggagc agagaaagca gaagcttatg taaagcgtgc tttaagcgtg ctatggaagc 541 atgtcgtcca cttccagctc cgtgctaacg ttgtcatcgt ttaatctatt atttttcacc 601 caagtgctca cggtactcag ctcgacgatc aagtacaacg aatacgcgac ggacaagggc 661 ggcaatgtga gcataccctg catagcccag ggcaatatta tgtgggtgaa ggagcacggc 721 aacaacagca cgataatcca gactggtcgt gttttggtgc tgcgcaatgt gagcactacg 781 gatgcgggaa tttacgtgtg cttcgcctca gtgccacgcc catcgacaac aacaagtgca 841 gcagcagcag caacaacgac aagcaaaccc gcaacatcag caactacctc accgcaaaat 901 cagcaggaga aagaaacgca gccagtggtg gataaaaatg aggatggtat cgatgaggaa 961 ccccaagtgg aggaggaact ggagtaccag gcccagcagc gaaccaggct catcgttcgc 1021 accgttccgg gcccagtttc gcagctctac ttcaaggcct ccaccatact gggcttcctc 1081 atctggcgct tcaacaagac ccaatccggg ggctatccgg tgcgcagctt tacggccgag 1141 ttccggaatg tctcctacaa aaccccgccg gcgaatgcca gtttcgagca cgcctggagc 1201 aggatggatc caatcaacat agccttcaat gtgcgccaaa tggaagtcta tcggctggcc 1261 cccaacacca cctatgagtt tcggatatgg gccaacaacg agctgggcag cggcgaggtg 1321 gtcaccacca atgtgaccac gctgccggag accaaggagg aggatctcat acgccttata 1381 aaacccgacc tagacaattt cgatccacgc atttggatag tggccgtcag catagtgctc 1441 ggaacccttg tgatattagc gatcggactc tgcattgtgc tctccaagga gtgctatcag 1501 tcggcgcaaa tggaactgca agatggttgg gacagcattg agcttatacc gaacataata 1561 cttaatcccg gtttcagcga gtcggatgct caaggtcagg gtcaggcggg tgatccgaat 1621 ggcggggagg aggggcagga tgacgacgac gatgaagatg tggccatgcc ctttccgcgc 1681 accatcatct ttggccagca ccatcggacg cctccgccgc cgcgcctcca cctgccaccg 1741 ccgcaccacc agcagcagca gcaccaccac cacctgcagc accaccagta tcaccaccac 1801 cggcggcagg acgaggacga cgacgacgac tacgaggagg agcacgagcc caccatggag 1861 cggttcaagc gcaaagtttc cgtcttcttc accggaccca ccatcaagcg catttgagac 1921 gcatctgagt acaaacactg gtcaccaagg ttgttgcacg gttaagattc ggattcggat 1981 cgggatagtt aggatccata gagcttatcg ttgggaagcc tcgttttcat ttcggtttct 2041 cc