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LOCUS XM_017157404 8573 bp mRNA linear INV 09-DEC-2024 variant X3, mRNA. ACCESSION XM_017157404 VERSION XM_017157404.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017157404.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..8573 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..8573 /gene="Cht6" /note="Chitinase 6; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins" /db_xref="GeneID:108068041" CDS 214..7908 /gene="Cht6" /codon_start=1 /product="mucin-2 isoform X1" /protein_id="XP_017012893.2" /db_xref="GeneID:108068041" /translation="MLPFRRGAAWQTLFLLCALAYCINEASSEGRVVCYYTNWSVYRP GTAKFNPQNINPYLCTHLVYAFGGFTKDNQMKPFDKYQDIEQGGYAKFTGLKTYNKQL KTMIAIGGWNEASSRFSPLVASNERRQQFIKNILKFLRQNHFDGIDLDWEYPAHREGG KSRDRDNYAQFVQELRAEFEREAEKTGRTRLLLTMAVPAGIEYIDKGYDVPKLNKYLD WFNVLTYDFHSSHEPSVNHHAPLYSLEEDSEYNYDAELNIDYSIKYYLKAGADRDKLV LGIPTYGRSYTLINEESTELGAPSEGPGEQGDATREKGYLAYYEICQTLKDDPEWTVV QPNANVMGPYAYRRNQWVGYDDEAIVRKKAEYVVAQGLGGIMFWAIDNDDFRGTCNGK PYPLIEAAKEAMVEALGLGINEVAKPSGPQKPSRSRSRDNASTRNRLNGKTEATPSSR RPSATRRPAISSTSTTHAPPPSTTFKLTEAEGSSLYIGGRASTTPPPPTTPDPGSDFK CEEEGFFQHPRDCKKYYWCLDSGPSGLGIVAHMFTCPSGLYFNPAADSCDFARNVPCK TKKSTTAAPAVSSTTPLTTTVRSNRVTAAPTARPVYPRTTSSTSTTSTTTTTTTTTPS SVDEDLEYEEDTDELSPSKSSDAEEDPQVIKELIDLIRKVGGVEQLEKHLLRNKDGSI TLKENSASGAATTPSTISKSLYDRVLSRPGTLSSFTRNRFKISEATETSTEASSSLSS SSSGSSSGSSSGQYSKYSSVLRGNSRQGPQNEGIEKLAEFDGFLKERKQYVTINRHRS ASQGDEEQEEDQQEEEENLAEVQTTTTRRPLSSVTPSYTSLRRTRPTTVAPPAEQQPQ QQEEKEAVEQQTQTQVKSYATLSRTRGRTTAPPEVTEAAPSSTTNRYKYFERTRPTKS ASATEDANDEPTEDQEEEEYEDEQKDIVTVQSKQSTNTRKYASIGRRTTTTTTATPET TTTTTAGTETAKASTTTTTNKNNNHYNSSNNNYNNVKLNNLIPTEENNTATPSTTAQS ETTTTTTTNETTEPNESTSTTTITNNLHTITTTTTTPTPTPIVASTVPTTTTTTSNGI SSDSLLATELSEASPTLPPSNPDIETTTPTTTTSTTTTESELATTTTPRTTTTTGNIE LNDVNNNDVDEDSEVTKTKTQYKYATTNRRRITTTTTTTTNNNAEAANDASPTNGLSS LNSIRTNPGRRKPQSEQQTTQTTTTEPTISSPRPFGYPRRRTRPTSTVSTSTTTIPQT DNTDNNNNTDNNDNETGAVAQVVKKTRLSPGDRPKNRYQLSRTRGSTTNTTPTTQQPP TTTTTARRLAFGGRQRGQVTKLTLVDEQTEEHKEEDDDGEEEEKEAEEDSSTTTTTTT TSRPTPKRIRVLKFRRPLNSNSNSTTVDSTTNSATDTNNPDTTTPTTTTLSQSSNTTT TTNTTGNKRFRKIVRKLRPVVDSSSTASSVDNSEETTRKPFVPSHTRFTDLQDNNNDL VNLRQRIKEQQSRGEPQDGVISNRFKTLGQKDDQDVSDLQRLRDKVKAEQARGEGEQG VINDRLKKLLAEKGTSTNSRQREESSATEDESSASVSSARPFFKRKLVARRPYTPTSG SGGTTKAPLAFSTTRPTAKFVRKKNGRFDPFNSSVRNRGEGFVRSDPRGSRLPGADRF KSQSEDGEEVEERHVQNQFATTLRRPFVPKTRSEVTKPQQVGDEEGSEEEDDEEEEED SEEEGGDEEEDEEEDEAAEKNQPEEEEKKSQNNPYKPKDNRVLPGSRPTFGATGSGPT GSAGNVPFNPRQRPSSSSSIAPPANRFGTTKRPRVVNRPPGVASPNLTLKPVASDYER TTPLTLLKPAPFIPSNNRSYERKYTGPSTEASETASENSLIEELNIDALNARNKKIFD KHSKKHPALKPKVVKVEEVETGTEAVAVEEETTEEQQQEQGFVTTTPSTPLAPPPPST QSDTPATTTTDTTPPETETETETETEIETVTETETATNANEATSINSQDQSSSSNSSS TTQAPPPATTLLHVFTLLEGEGESENEGETTTTTRRPTQKARLHPTVQTEVVPKHKLI EINRIVEINSKQAKAAQRKSKANQDFGTLRVESLPHVEQLGEISVVKYVHLVDGSDIQ INDGHSTVADYTPTEPNFSASSAPVRNSLPETETTDTETDRSGKSLVPEVLTGALETS TISLEGLFDSARKGKQLSSNSIISETEESTTISSSSAAATETTGETTTPAPTYVRPIV PLLRPESNESSPLVISIANLDQVILSKVQKSLAEKSRTPADSSDSNSAFSLRQPLVVQ APEAANTNTLNTEDQTVNGAVQTTTTRPSDDQVAEETTIFSIETATEPQISTQITQDS ETLTARPIGAVIMGQLGLNTQTTTTADNGNQENTQTTSTISSADNNNNNSHQENTQTT ISGAISSEAISNKNNNHLTLDTQTTVTKNSPENTQTTTTTTTIGAISGAIGGSINPST QVTTTTNSNSTTTSSSSTTTTVGSKVSEAVSFSSESHVVHRKKMGRKGRGRRLRNRKT TTTTTTTETPTTVEASLDDTTTVVPE" misc_feature 307..1425 /gene="Cht6" /note="This conserved domain family includes a large number of catalytically inactive chitinase-like lectins (chitolectins) including YKL-39, YKL-40 (HCGP39), YM1, oviductin, and AMCase (acidic mammalian chitinase), as well as catalytically active...; Region: GH18_chitolectin_chitotriosidase; cd02872" /db_xref="CDD:119351" misc_feature order(316..318,328..330,544..549,661..663,667..672, 808..813,880..882,886..891,904..906,1057..1059,1063..1065, 1147..1149,1345..1347) /gene="Cht6" /note="active site" /db_xref="CDD:119351" misc_feature 1738..1908 /gene="Cht6" /note="Chitin binding Peritrophin-A domain; Region: CBM_14; pfam01607" /db_xref="CDD:426342" misc_feature 7027..>7653 /gene="Cht6" /note="MSCRAMM family adhesin clumping factor ClfA; Region: MSCRAMM_ClfA; NF033609" /db_xref="CDD:468110" polyA_site 8573 /gene="Cht6" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 acggtattgt tggccttagc gcattatttt ttcctcctcg tcgttgtcgt cgcgtttaac 61 tgaaataata acaacaacaa caacgagagc agcagcaaca tcagcagcag caacagcaac 121 agcaacagcg acagcagcaa caccattgcc agcagcaaca tctagcccaa aggagccttg 181 tattgccacc tcgaccagca aaaagccgcc aaaatgcttc cgttccggcg tggagcggcc 241 tggcaaacgc tcttcctgct ctgcgctctc gcctattgca taaatgaagc cagcagcgag 301 ggtcgcgtgg tctgctacta cacaaactgg agtgtctatc ggccgggcac cgccaagttc 361 aatccgcaga acatcaatcc atacctgtgt acacatttgg tgtacgcatt cggtggattc 421 acgaaggaca accagatgaa gccctttgac aagtaccagg acatcgagca gggtggctat 481 gccaagttca ctggactcaa aacgtacaac aaacagctga agaccatgat tgccatcggc 541 ggttggaacg aggcgagttc cagattttcg cccctggtgg cgagcaacga gcgccgccag 601 cagttcatca agaacatcct gaagttcctg cgccagaacc acttcgatgg catcgatctc 661 gactgggagt atccggctca tcgcgagggc ggcaagtccc gcgatcgcga caactatgcc 721 cagtttgtcc aggagctgcg ggccgagttc gaaagggagg cggagaaaac gggacgcacc 781 cgactcctgc tcaccatggc cgtgcccgcc ggcatcgagt acatcgacaa gggctacgat 841 gtgcccaagc tgaacaagta tctggattgg ttcaatgtgc tcacctacga cttccactcc 901 tcccacgagc cgtcggtcaa ccaccacgct ccgctctatt cgctggagga ggattccgag 961 tacaactacg atgccgagct gaatattgac tactccatta aatactacct gaaagcgggt 1021 gccgatcggg acaagctggt cctgggcatt cccacctatg gacgatccta cactttgatc 1081 aacgaggaga gcaccgaact gggggcacct tccgagggtc cgggagagca gggtgatgcc 1141 acgcgcgaaa agggatacct ggcctactat gaaatctgtc agaccctcaa ggacgatccc 1201 gagtggacgg tggtgcagcc gaatgccaat gtgatgggtc cctacgccta caggcgcaac 1261 cagtgggtgg gctacgatga cgaggccatt gtgcgcaaga aggccgagta tgtggtggcc 1321 cagggactgg gcggcattat gttctgggcc atcgacaacg acgatttccg cggcacctgc 1381 aacggcaagc cctatccgct catcgaggcg gccaaggagg ccatggtgga ggcactggga 1441 ctgggcatca acgaggtggc caagccaagt ggtccccaga aaccgtcgcg atctcgcagt 1501 cgcgacaatg ccagcaccag gaatcgtctg aatggcaaga ccgaagccac gcccagttca 1561 aggaggccca gtgccaccag aaggccagcc ataagctcca ccagcaccac ccacgcaccg 1621 ccaccgagca ccaccttcaa gctaacggag gccgagggct cttcgctgta tattggaggc 1681 agggcctcca ccacaccgcc accgcccacg actcccgatc cgggctcgga cttcaagtgc 1741 gaggaggagg gcttcttcca gcatcccagg gactgcaaga aatactactg gtgcctggac 1801 agtggaccct ctggcctggg cattgtggct cacatgttca cctgtccgtc gggactctac 1861 ttcaatccgg ccgccgattc ctgcgacttt gcacgcaatg tgccctgcaa gaccaaaaaa 1921 tccaccacag cggcaccggc agtgagctcc accacaccgc tgaccaccac agtgcgttcg 1981 aatcgggtga ctgcggcgcc cacagctcgt cccgtttatc cacgaaccac cagcagcact 2041 agcaccacca gcactacaac caccaccaca acaaccaccc cgtcgtctgt tgatgaagat 2101 ttggagtacg aggaggacac cgatgagctg tcgcccagca agtcgagcga tgccgaggag 2161 gatccgcagg tgatcaagga gctgatcgat ctgattcgca aggtgggcgg tgtggagcag 2221 ctggagaagc atctgctgcg caacaaggat ggctccatta cgttgaagga gaattccgcg 2281 agtggtgcgg ccaccacacc ttctactatt agtaaatctc tgtacgatcg tgtgttgagt 2341 cgacctggca ctttgagttc cttcacccgc aatcgcttca agatcagcga agccaccgag 2401 acgagcacgg aggccagctc ttctttgagt agctcttcga gtggctcatc gagtggctca 2461 tcgagtggcc aatactccaa atactcctcc gtcctgaggg gcaacagccg ccagggtcca 2521 cagaacgagg gcattgaaaa gttggccgag ttcgatggct tcctgaagga gcgcaagcaa 2581 tatgtgacca tcaatcgcca tcgatcggcg agtcagggcg atgaggagca ggaggaggat 2641 cagcaggagg aggaggagaa cctggccgag gttcaaacaa caaccacccg tcgtccgctg 2701 agctcagtca ccccctctta cacgagtctc agacgcacca ggcccaccac agtggcaccg 2761 ccggcagaac aacaaccaca gcagcaggag gagaaggagg cggtggagca acagacccag 2821 actcaggtca aatcctatgc caccttgagt cgcacgcgtg gacgcaccac tgcaccacca 2881 gaggtcacgg aagcggcgcc cagttcgaca accaatcgtt acaaatactt tgagcgtacg 2941 cgacccacca agagtgccag tgccactgag gatgccaacg atgagccgac ggaggaccag 3001 gaagaggagg agtacgagga cgagcaaaag gacattgtta cggtacagag caaacaaagc 3061 acaaacacac gtaaatatgc gagcatcggc cgcagaacaa caaccaccac aacagcaaca 3121 ccagaaacta caacaacaac aaccgccggc actgagactg ccaaggccag caccaccacc 3181 accaccaaca agaacaacaa ccactacaac agcagcaata acaactacaa caatgtgaaa 3241 ctgaataacc taataccaac agaagagaac aacacagcaa cacccagcac caccgcccaa 3301 tccgaaacca ccaccaccac tacaactaac gaaaccactg aaccaaatga aagcacctca 3361 accacaacca taactaataa cctgcatacc atcaccacca ccaccaccac acccacaccc 3421 acaccaattg tagcctccac tgtcccaaca acaacaacaa ccacctccaa tggcattagc 3481 tcagactctc tgctagccac cgagctgagc gaagcctcgc ccaccctccc tccttccaat 3541 cccgacatag aaacaaccac accgacaaca accacctcaa ccacaacaac ggaatccgaa 3601 ctggccacta caaccacacc gagaacaaca accacaacag gcaacatcga actgaatgac 3661 gtgaacaaca acgacgtgga cgaggacagc gaggtaacga aaaccaagac ccaatacaag 3721 tatgcgacca ccaaccgtcg acgtataacc acaacaacaa caaccaccac caacaacaat 3781 gcagaagcag cgaacgatgc tagtccaaca aacggtttga gtagtttaaa tagcattaga 3841 accaacccgg gcagaaggaa accccaatca gaacaacaga ccacccaaac aacaaccacc 3901 gaaccaacca tttctagtcc ccgacccttt ggttatcccc gacgtcgcac acgacccacc 3961 agcacagtca gcactagcac aaccacaatt ccccaaaccg ataataccga taataataac 4021 aataccgata ataacgataa cgaaaccgga gcagttgcgc aagtagtgaa gaagacacga 4081 ctatctccag gggataggcc caagaatcgt tatcaattga gccgcaccag aggcagcacc 4141 accaacacca ccccaacaac acaacaaccc ccaacaacaa ccaccacagc cagaagactg 4201 gcctttgggg gccgtcagcg tggccaggta actaaactaa ccctagtcga tgagcagact 4261 gaagaacaca aagaggaaga tgatgatgga gaagaagagg agaaggaggc ggaagaagac 4321 tccagcacaa caacaaccac cacaaccacc agcagaccaa caccaaagcg catacgtgtg 4381 ctgaaattcc gcagaccctt gaatagcaat agcaatagta ccactgtaga tagcaccact 4441 aatagcgcca ctgacactaa taacccagac accaccacac caacaacaac cacattgagc 4501 caaagcagca acaccaccac caccacaaac accactggca acaagcgttt ccgcaaaatt 4561 gtccgcaaac tgaggcctgt ggtggactct tcgagtaccg cgtctagtgt ggacaattcc 4621 gaggaaacca cccgtaaacc tttcgttccc agccacacca gattcacgga tttgcaggac 4681 aacaacaacg atctggtgaa tcttcgccag cggatcaagg agcagcaatc acggggcgag 4741 ccgcaggatg gtgtgatcag caatcgattc aagaccctcg gtcaaaagga cgatcaggat 4801 gtttcggatt tgcagaggtt gcgcgacaag gtgaaggccg aacaggcgag aggagagggt 4861 gagcagggtg tgatcaacga tcgcctgaag aagttgctgg ccgaaaaggg cacaagtacg 4921 aattctcgcc agagagaaga atcctcggcc acagaagacg agtcttccgc gtcggtttcc 4981 tcggccagac ccttcttcaa acgcaaactg gtggcccgtc gaccctatac accaacctcg 5041 ggcagtggtg gcaccaccaa ggcaccactc gccttcagca ccacccgacc caccgcgaag 5101 tttgtgcgca agaagaacgg ccgcttcgat cccttcaact cgagtgttcg caatcgcggc 5161 gagggcttcg tgagaagcga tccccgtggc tccagattgc cgggagccga tcgcttcaag 5221 agtcagtcgg aagacggtga ggaggtggaa gaaaggcatg tgcagaatca gtttgccacc 5281 accttgcgac gaccttttgt gccgaagacg cgatcggagg tgactaaacc acagcaggtt 5341 ggagatgaag agggcagtga ggaagaagac gacgaggaag aggaggagga ttccgaggaa 5401 gagggcggcg acgaagagga ggatgaggaa gaagatgagg cggctgagaa gaatcagccg 5461 gaagaggagg agaaaaagtc ccagaacaac ccgtacaagc ccaaggataa ccgcgtgctg 5521 ccgggcagtc gacccacctt tggagccacc ggaagtggac ccactggctc cgcaggcaac 5581 gtgcccttca atccccgcca gcgtccatca tcttcaagca gcattgcacc accggccaac 5641 cgctttggca ccaccaagcg accacgcgtc gtcaaccgac cacccggagt ggcctcacct 5701 aacttgacct tgaaaccggt ggccagtgat tacgagcgca ccacaccgct gacccttttg 5761 aagccggcac cctttatacc cagcaataat aggagctacg agcgaaaata cacgggtccc 5821 tccacagagg cctctgagac ggccagcgag aattcgctga tcgaagagct gaatatcgat 5881 gcgctgaatg cgaggaacaa gaagatcttc gacaagcaca gcaagaagca tccggcactg 5941 aagcccaagg tggtgaaggt tgaggaggtg gaaaccggaa cggaggcggt ggcggtggag 6001 gaggaaacca ccgaggagca gcagcaggaa cagggctttg tgaccaccac acccagtaca 6061 ccactagcac caccaccacc cagcacacag tcagacacac cagccaccac caccacagac 6121 accacgccac cagaaacaga aactgaaact gaaacagaaa ctgaaataga aactgtaacc 6181 gaaactgaaa cagcgaccaa tgctaatgaa gccacttcca tcaattcaca ggatcaatcg 6241 agcagcagca acagcagcag caccactcag gcaccaccgc ctgccaccac cctgctgcat 6301 gtgttcaccc tgctcgaggg tgagggtgag tccgagaatg agggtgaaac caccaccacg 6361 acgagaaggc cgacgcagaa ggcccgtctt catcccactg tgcaaacgga ggtggtgccc 6421 aagcacaagt tgatcgagat caatcgcatt gtcgagatca attcgaagca ggccaaggct 6481 gctcagcgga aatcgaaggc taatcaggac tttggaacgc tgcgcgtgga atcgctgccc 6541 catgtggagc agctgggcga gatcagtgtg gtgaagtacg tccatctggt ggatggaagt 6601 gatattcaaa tcaatgatgg ccacagcaca gtggctgatt atacgcccac ggagcccaac 6661 ttctcagctt cgtcggcacc tgtgaggaat tccctgccag aaacggaaac aaccgatacc 6721 gaaaccgatc gtagtggcaa atccttggtt ccagaagtgc tgaccggcgc cctggagacc 6781 tcgaccatct cgctggaggg actattcgat tccgccagga agggcaagca actgagcagc 6841 aatagcatta tcagtgaaac agaagagagc accaccatta gcagcagcag tgctgcggcc 6901 accgaaacca ccggggagac aaccacaccg gcacccactt acgtaagacc cattgtaccc 6961 ctcctacgac ccgagtccaa tgagtcctcg cccctggtca tttcgatagc caatctcgat 7021 caggtgattc tgagcaaggt gcaaaagtcg ctggccgaga agagccgaac ccctgccgat 7081 tcttctgact caaattcggc cttctcgctg cgccagccgc tggtggtgca ggctccagaa 7141 gccgcaaaca cgaacacact caacactgaa gatcaaacgg tcaatggtgc tgtgcaaaca 7201 acaaccacta ggccatcaga cgatcaggtg gctgaagaga ccacaatctt tagcattgag 7261 accgccactg agccacagat tagtacacaa ataacacaag acagtgaaac actaacagcc 7321 aggccaattg gtgctgtgat tatgggtcag cttggtctaa acacacaaac aacaaccacc 7381 gctgacaacg gcaatcagga aaatactcaa acaacgagca caattagcag tgctgacaac 7441 aacaacaaca acagccacca agaaaatact caaacaacaa tcagtggcgc tattagttcc 7501 gaagctatta gtaacaagaa caacaaccac ctgacactcg atacacaaac aacagtcacc 7561 aaaaacagtc cagaaaatac gcaaacaaca acaaccacaa ccacaattgg cgcaattagt 7621 ggggctattg gtggcagcat aaatccgagc acacaagtaa caacaaccac caatagcaat 7681 agcaccacca ctagcagcag cagcaccaca accacagtgg gcagcaaagt tagcgaggca 7741 gttagcttta gttcggagtc gcatgtggtg catcgcaaaa agatggggcg caaggggcgt 7801 ggccgacgcc tgcgcaaccg caaaacaacg acaacaacaa caaccacaga gacgccgacc 7861 acggtggagg cgtcgcttga cgacaccacc acggtggttc cggaataggt cacaaaaaga 7921 accacaaaac aaccagagaa aatcagcgta gttagttatt tctagtctta gcccttatct 7981 tatccacaga agagagtctt ctgcgaaatt aacccttttg ttgccaaaac cttagataat 8041 tggctgcgtt gctttggctt aacaacaaca accatggcaa gaaaatcaaa aatcaaatta 8101 agtaaacaac catttcggct gcttttaaac tctttccaaa tttcccagtg ctgctgcttt 8161 taatttgaat actctactat atatatctat tttttttttt gctatgtaaa ttatttaaac 8221 aattcgtatt cttcgagctg ccatacctaa acaacaacaa cacccacaca acatatacat 8281 ccactcacac acattcgttc acacatgcag atgcgaaaag tctttccttg gttcaaatat 8341 agaatagaaa tctagaaatc tagacaaaca acgaccctca gtggatgcaa aatcttgatc 8401 aacttgaagt aactcttaat ggcttttacc aggcgcagtt ctctctcaca attctatctc 8461 tttgctaatc aatttttttc actctttccc cctctatccg aaatacttta agtctagctt 8521 tagttgtaaa atatttatgc acaacaataa aataatgaac aaaaagaaac aaa