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LOCUS XM_017157403 8575 bp mRNA linear INV 09-DEC-2024 variant X1, mRNA. ACCESSION XM_017157403 VERSION XM_017157403.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017157403.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..8575 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..8575 /gene="Cht6" /note="Chitinase 6; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins" /db_xref="GeneID:108068041" CDS 216..7910 /gene="Cht6" /codon_start=1 /product="mucin-2 isoform X1" /protein_id="XP_017012892.2" /db_xref="GeneID:108068041" /translation="MLPFRRGAAWQTLFLLCALAYCINEASSEGRVVCYYTNWSVYRP GTAKFNPQNINPYLCTHLVYAFGGFTKDNQMKPFDKYQDIEQGGYAKFTGLKTYNKQL KTMIAIGGWNEASSRFSPLVASNERRQQFIKNILKFLRQNHFDGIDLDWEYPAHREGG KSRDRDNYAQFVQELRAEFEREAEKTGRTRLLLTMAVPAGIEYIDKGYDVPKLNKYLD WFNVLTYDFHSSHEPSVNHHAPLYSLEEDSEYNYDAELNIDYSIKYYLKAGADRDKLV LGIPTYGRSYTLINEESTELGAPSEGPGEQGDATREKGYLAYYEICQTLKDDPEWTVV QPNANVMGPYAYRRNQWVGYDDEAIVRKKAEYVVAQGLGGIMFWAIDNDDFRGTCNGK PYPLIEAAKEAMVEALGLGINEVAKPSGPQKPSRSRSRDNASTRNRLNGKTEATPSSR RPSATRRPAISSTSTTHAPPPSTTFKLTEAEGSSLYIGGRASTTPPPPTTPDPGSDFK CEEEGFFQHPRDCKKYYWCLDSGPSGLGIVAHMFTCPSGLYFNPAADSCDFARNVPCK TKKSTTAAPAVSSTTPLTTTVRSNRVTAAPTARPVYPRTTSSTSTTSTTTTTTTTTPS SVDEDLEYEEDTDELSPSKSSDAEEDPQVIKELIDLIRKVGGVEQLEKHLLRNKDGSI TLKENSASGAATTPSTISKSLYDRVLSRPGTLSSFTRNRFKISEATETSTEASSSLSS SSSGSSSGSSSGQYSKYSSVLRGNSRQGPQNEGIEKLAEFDGFLKERKQYVTINRHRS ASQGDEEQEEDQQEEEENLAEVQTTTTRRPLSSVTPSYTSLRRTRPTTVAPPAEQQPQ QQEEKEAVEQQTQTQVKSYATLSRTRGRTTAPPEVTEAAPSSTTNRYKYFERTRPTKS ASATEDANDEPTEDQEEEEYEDEQKDIVTVQSKQSTNTRKYASIGRRTTTTTTATPET TTTTTAGTETAKASTTTTTNKNNNHYNSSNNNYNNVKLNNLIPTEENNTATPSTTAQS ETTTTTTTNETTEPNESTSTTTITNNLHTITTTTTTPTPTPIVASTVPTTTTTTSNGI SSDSLLATELSEASPTLPPSNPDIETTTPTTTTSTTTTESELATTTTPRTTTTTGNIE LNDVNNNDVDEDSEVTKTKTQYKYATTNRRRITTTTTTTTNNNAEAANDASPTNGLSS LNSIRTNPGRRKPQSEQQTTQTTTTEPTISSPRPFGYPRRRTRPTSTVSTSTTTIPQT DNTDNNNNTDNNDNETGAVAQVVKKTRLSPGDRPKNRYQLSRTRGSTTNTTPTTQQPP TTTTTARRLAFGGRQRGQVTKLTLVDEQTEEHKEEDDDGEEEEKEAEEDSSTTTTTTT TSRPTPKRIRVLKFRRPLNSNSNSTTVDSTTNSATDTNNPDTTTPTTTTLSQSSNTTT TTNTTGNKRFRKIVRKLRPVVDSSSTASSVDNSEETTRKPFVPSHTRFTDLQDNNNDL VNLRQRIKEQQSRGEPQDGVISNRFKTLGQKDDQDVSDLQRLRDKVKAEQARGEGEQG VINDRLKKLLAEKGTSTNSRQREESSATEDESSASVSSARPFFKRKLVARRPYTPTSG SGGTTKAPLAFSTTRPTAKFVRKKNGRFDPFNSSVRNRGEGFVRSDPRGSRLPGADRF KSQSEDGEEVEERHVQNQFATTLRRPFVPKTRSEVTKPQQVGDEEGSEEEDDEEEEED SEEEGGDEEEDEEEDEAAEKNQPEEEEKKSQNNPYKPKDNRVLPGSRPTFGATGSGPT GSAGNVPFNPRQRPSSSSSIAPPANRFGTTKRPRVVNRPPGVASPNLTLKPVASDYER TTPLTLLKPAPFIPSNNRSYERKYTGPSTEASETASENSLIEELNIDALNARNKKIFD KHSKKHPALKPKVVKVEEVETGTEAVAVEEETTEEQQQEQGFVTTTPSTPLAPPPPST QSDTPATTTTDTTPPETETETETETEIETVTETETATNANEATSINSQDQSSSSNSSS TTQAPPPATTLLHVFTLLEGEGESENEGETTTTTRRPTQKARLHPTVQTEVVPKHKLI EINRIVEINSKQAKAAQRKSKANQDFGTLRVESLPHVEQLGEISVVKYVHLVDGSDIQ INDGHSTVADYTPTEPNFSASSAPVRNSLPETETTDTETDRSGKSLVPEVLTGALETS TISLEGLFDSARKGKQLSSNSIISETEESTTISSSSAAATETTGETTTPAPTYVRPIV PLLRPESNESSPLVISIANLDQVILSKVQKSLAEKSRTPADSSDSNSAFSLRQPLVVQ APEAANTNTLNTEDQTVNGAVQTTTTRPSDDQVAEETTIFSIETATEPQISTQITQDS ETLTARPIGAVIMGQLGLNTQTTTTADNGNQENTQTTSTISSADNNNNNSHQENTQTT ISGAISSEAISNKNNNHLTLDTQTTVTKNSPENTQTTTTTTTIGAISGAIGGSINPST QVTTTTNSNSTTTSSSSTTTTVGSKVSEAVSFSSESHVVHRKKMGRKGRGRRLRNRKT TTTTTTTETPTTVEASLDDTTTVVPE" misc_feature 309..1427 /gene="Cht6" /note="This conserved domain family includes a large number of catalytically inactive chitinase-like lectins (chitolectins) including YKL-39, YKL-40 (HCGP39), YM1, oviductin, and AMCase (acidic mammalian chitinase), as well as catalytically active...; Region: GH18_chitolectin_chitotriosidase; cd02872" /db_xref="CDD:119351" misc_feature order(318..320,330..332,546..551,663..665,669..674, 810..815,882..884,888..893,906..908,1059..1061,1065..1067, 1149..1151,1347..1349) /gene="Cht6" /note="active site" /db_xref="CDD:119351" misc_feature 1740..1910 /gene="Cht6" /note="Chitin binding Peritrophin-A domain; Region: CBM_14; pfam01607" /db_xref="CDD:426342" misc_feature 7029..>7655 /gene="Cht6" /note="MSCRAMM family adhesin clumping factor ClfA; Region: MSCRAMM_ClfA; NF033609" /db_xref="CDD:468110" polyA_site 8575 /gene="Cht6" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 agtgcagcgg cgactctcga acgcattatt ttttcctcct cgtcgttgtc gtcgcgttta 61 actgaaataa taacaacaac aacaacgaga gcagcagcaa catcagcagc agcaacagca 121 acagcaacag cgacagcagc aacaccattg ccagcagcaa catctagccc aaaggagcct 181 tgtattgcca cctcgaccag caaaaagccg ccaaaatgct tccgttccgg cgtggagcgg 241 cctggcaaac gctcttcctg ctctgcgctc tcgcctattg cataaatgaa gccagcagcg 301 agggtcgcgt ggtctgctac tacacaaact ggagtgtcta tcggccgggc accgccaagt 361 tcaatccgca gaacatcaat ccatacctgt gtacacattt ggtgtacgca ttcggtggat 421 tcacgaagga caaccagatg aagccctttg acaagtacca ggacatcgag cagggtggct 481 atgccaagtt cactggactc aaaacgtaca acaaacagct gaagaccatg attgccatcg 541 gcggttggaa cgaggcgagt tccagatttt cgcccctggt ggcgagcaac gagcgccgcc 601 agcagttcat caagaacatc ctgaagttcc tgcgccagaa ccacttcgat ggcatcgatc 661 tcgactggga gtatccggct catcgcgagg gcggcaagtc ccgcgatcgc gacaactatg 721 cccagtttgt ccaggagctg cgggccgagt tcgaaaggga ggcggagaaa acgggacgca 781 cccgactcct gctcaccatg gccgtgcccg ccggcatcga gtacatcgac aagggctacg 841 atgtgcccaa gctgaacaag tatctggatt ggttcaatgt gctcacctac gacttccact 901 cctcccacga gccgtcggtc aaccaccacg ctccgctcta ttcgctggag gaggattccg 961 agtacaacta cgatgccgag ctgaatattg actactccat taaatactac ctgaaagcgg 1021 gtgccgatcg ggacaagctg gtcctgggca ttcccaccta tggacgatcc tacactttga 1081 tcaacgagga gagcaccgaa ctgggggcac cttccgaggg tccgggagag cagggtgatg 1141 ccacgcgcga aaagggatac ctggcctact atgaaatctg tcagaccctc aaggacgatc 1201 ccgagtggac ggtggtgcag ccgaatgcca atgtgatggg tccctacgcc tacaggcgca 1261 accagtgggt gggctacgat gacgaggcca ttgtgcgcaa gaaggccgag tatgtggtgg 1321 cccagggact gggcggcatt atgttctggg ccatcgacaa cgacgatttc cgcggcacct 1381 gcaacggcaa gccctatccg ctcatcgagg cggccaagga ggccatggtg gaggcactgg 1441 gactgggcat caacgaggtg gccaagccaa gtggtcccca gaaaccgtcg cgatctcgca 1501 gtcgcgacaa tgccagcacc aggaatcgtc tgaatggcaa gaccgaagcc acgcccagtt 1561 caaggaggcc cagtgccacc agaaggccag ccataagctc caccagcacc acccacgcac 1621 cgccaccgag caccaccttc aagctaacgg aggccgaggg ctcttcgctg tatattggag 1681 gcagggcctc caccacaccg ccaccgccca cgactcccga tccgggctcg gacttcaagt 1741 gcgaggagga gggcttcttc cagcatccca gggactgcaa gaaatactac tggtgcctgg 1801 acagtggacc ctctggcctg ggcattgtgg ctcacatgtt cacctgtccg tcgggactct 1861 acttcaatcc ggccgccgat tcctgcgact ttgcacgcaa tgtgccctgc aagaccaaaa 1921 aatccaccac agcggcaccg gcagtgagct ccaccacacc gctgaccacc acagtgcgtt 1981 cgaatcgggt gactgcggcg cccacagctc gtcccgttta tccacgaacc accagcagca 2041 ctagcaccac cagcactaca accaccacca caacaaccac cccgtcgtct gttgatgaag 2101 atttggagta cgaggaggac accgatgagc tgtcgcccag caagtcgagc gatgccgagg 2161 aggatccgca ggtgatcaag gagctgatcg atctgattcg caaggtgggc ggtgtggagc 2221 agctggagaa gcatctgctg cgcaacaagg atggctccat tacgttgaag gagaattccg 2281 cgagtggtgc ggccaccaca ccttctacta ttagtaaatc tctgtacgat cgtgtgttga 2341 gtcgacctgg cactttgagt tccttcaccc gcaatcgctt caagatcagc gaagccaccg 2401 agacgagcac ggaggccagc tcttctttga gtagctcttc gagtggctca tcgagtggct 2461 catcgagtgg ccaatactcc aaatactcct ccgtcctgag gggcaacagc cgccagggtc 2521 cacagaacga gggcattgaa aagttggccg agttcgatgg cttcctgaag gagcgcaagc 2581 aatatgtgac catcaatcgc catcgatcgg cgagtcaggg cgatgaggag caggaggagg 2641 atcagcagga ggaggaggag aacctggccg aggttcaaac aacaaccacc cgtcgtccgc 2701 tgagctcagt caccccctct tacacgagtc tcagacgcac caggcccacc acagtggcac 2761 cgccggcaga acaacaacca cagcagcagg aggagaagga ggcggtggag caacagaccc 2821 agactcaggt caaatcctat gccaccttga gtcgcacgcg tggacgcacc actgcaccac 2881 cagaggtcac ggaagcggcg cccagttcga caaccaatcg ttacaaatac tttgagcgta 2941 cgcgacccac caagagtgcc agtgccactg aggatgccaa cgatgagccg acggaggacc 3001 aggaagagga ggagtacgag gacgagcaaa aggacattgt tacggtacag agcaaacaaa 3061 gcacaaacac acgtaaatat gcgagcatcg gccgcagaac aacaaccacc acaacagcaa 3121 caccagaaac tacaacaaca acaaccgccg gcactgagac tgccaaggcc agcaccacca 3181 ccaccaccaa caagaacaac aaccactaca acagcagcaa taacaactac aacaatgtga 3241 aactgaataa cctaatacca acagaagaga acaacacagc aacacccagc accaccgccc 3301 aatccgaaac caccaccacc actacaacta acgaaaccac tgaaccaaat gaaagcacct 3361 caaccacaac cataactaat aacctgcata ccatcaccac caccaccacc acacccacac 3421 ccacaccaat tgtagcctcc actgtcccaa caacaacaac aaccacctcc aatggcatta 3481 gctcagactc tctgctagcc accgagctga gcgaagcctc gcccaccctc cctccttcca 3541 atcccgacat agaaacaacc acaccgacaa caaccacctc aaccacaaca acggaatccg 3601 aactggccac tacaaccaca ccgagaacaa caaccacaac aggcaacatc gaactgaatg 3661 acgtgaacaa caacgacgtg gacgaggaca gcgaggtaac gaaaaccaag acccaataca 3721 agtatgcgac caccaaccgt cgacgtataa ccacaacaac aacaaccacc accaacaaca 3781 atgcagaagc agcgaacgat gctagtccaa caaacggttt gagtagttta aatagcatta 3841 gaaccaaccc gggcagaagg aaaccccaat cagaacaaca gaccacccaa acaacaacca 3901 ccgaaccaac catttctagt ccccgaccct ttggttatcc ccgacgtcgc acacgaccca 3961 ccagcacagt cagcactagc acaaccacaa ttccccaaac cgataatacc gataataata 4021 acaataccga taataacgat aacgaaaccg gagcagttgc gcaagtagtg aagaagacac 4081 gactatctcc aggggatagg cccaagaatc gttatcaatt gagccgcacc agaggcagca 4141 ccaccaacac caccccaaca acacaacaac ccccaacaac aaccaccaca gccagaagac 4201 tggcctttgg gggccgtcag cgtggccagg taactaaact aaccctagtc gatgagcaga 4261 ctgaagaaca caaagaggaa gatgatgatg gagaagaaga ggagaaggag gcggaagaag 4321 actccagcac aacaacaacc accacaacca ccagcagacc aacaccaaag cgcatacgtg 4381 tgctgaaatt ccgcagaccc ttgaatagca atagcaatag taccactgta gatagcacca 4441 ctaatagcgc cactgacact aataacccag acaccaccac accaacaaca accacattga 4501 gccaaagcag caacaccacc accaccacaa acaccactgg caacaagcgt ttccgcaaaa 4561 ttgtccgcaa actgaggcct gtggtggact cttcgagtac cgcgtctagt gtggacaatt 4621 ccgaggaaac cacccgtaaa cctttcgttc ccagccacac cagattcacg gatttgcagg 4681 acaacaacaa cgatctggtg aatcttcgcc agcggatcaa ggagcagcaa tcacggggcg 4741 agccgcagga tggtgtgatc agcaatcgat tcaagaccct cggtcaaaag gacgatcagg 4801 atgtttcgga tttgcagagg ttgcgcgaca aggtgaaggc cgaacaggcg agaggagagg 4861 gtgagcaggg tgtgatcaac gatcgcctga agaagttgct ggccgaaaag ggcacaagta 4921 cgaattctcg ccagagagaa gaatcctcgg ccacagaaga cgagtcttcc gcgtcggttt 4981 cctcggccag acccttcttc aaacgcaaac tggtggcccg tcgaccctat acaccaacct 5041 cgggcagtgg tggcaccacc aaggcaccac tcgccttcag caccacccga cccaccgcga 5101 agtttgtgcg caagaagaac ggccgcttcg atcccttcaa ctcgagtgtt cgcaatcgcg 5161 gcgagggctt cgtgagaagc gatccccgtg gctccagatt gccgggagcc gatcgcttca 5221 agagtcagtc ggaagacggt gaggaggtgg aagaaaggca tgtgcagaat cagtttgcca 5281 ccaccttgcg acgacctttt gtgccgaaga cgcgatcgga ggtgactaaa ccacagcagg 5341 ttggagatga agagggcagt gaggaagaag acgacgagga agaggaggag gattccgagg 5401 aagagggcgg cgacgaagag gaggatgagg aagaagatga ggcggctgag aagaatcagc 5461 cggaagagga ggagaaaaag tcccagaaca acccgtacaa gcccaaggat aaccgcgtgc 5521 tgccgggcag tcgacccacc tttggagcca ccggaagtgg acccactggc tccgcaggca 5581 acgtgccctt caatccccgc cagcgtccat catcttcaag cagcattgca ccaccggcca 5641 accgctttgg caccaccaag cgaccacgcg tcgtcaaccg accacccgga gtggcctcac 5701 ctaacttgac cttgaaaccg gtggccagtg attacgagcg caccacaccg ctgacccttt 5761 tgaagccggc accctttata cccagcaata ataggagcta cgagcgaaaa tacacgggtc 5821 cctccacaga ggcctctgag acggccagcg agaattcgct gatcgaagag ctgaatatcg 5881 atgcgctgaa tgcgaggaac aagaagatct tcgacaagca cagcaagaag catccggcac 5941 tgaagcccaa ggtggtgaag gttgaggagg tggaaaccgg aacggaggcg gtggcggtgg 6001 aggaggaaac caccgaggag cagcagcagg aacagggctt tgtgaccacc acacccagta 6061 caccactagc accaccacca cccagcacac agtcagacac accagccacc accaccacag 6121 acaccacgcc accagaaaca gaaactgaaa ctgaaacaga aactgaaata gaaactgtaa 6181 ccgaaactga aacagcgacc aatgctaatg aagccacttc catcaattca caggatcaat 6241 cgagcagcag caacagcagc agcaccactc aggcaccacc gcctgccacc accctgctgc 6301 atgtgttcac cctgctcgag ggtgagggtg agtccgagaa tgagggtgaa accaccacca 6361 cgacgagaag gccgacgcag aaggcccgtc ttcatcccac tgtgcaaacg gaggtggtgc 6421 ccaagcacaa gttgatcgag atcaatcgca ttgtcgagat caattcgaag caggccaagg 6481 ctgctcagcg gaaatcgaag gctaatcagg actttggaac gctgcgcgtg gaatcgctgc 6541 cccatgtgga gcagctgggc gagatcagtg tggtgaagta cgtccatctg gtggatggaa 6601 gtgatattca aatcaatgat ggccacagca cagtggctga ttatacgccc acggagccca 6661 acttctcagc ttcgtcggca cctgtgagga attccctgcc agaaacggaa acaaccgata 6721 ccgaaaccga tcgtagtggc aaatccttgg ttccagaagt gctgaccggc gccctggaga 6781 cctcgaccat ctcgctggag ggactattcg attccgccag gaagggcaag caactgagca 6841 gcaatagcat tatcagtgaa acagaagaga gcaccaccat tagcagcagc agtgctgcgg 6901 ccaccgaaac caccggggag acaaccacac cggcacccac ttacgtaaga cccattgtac 6961 ccctcctacg acccgagtcc aatgagtcct cgcccctggt catttcgata gccaatctcg 7021 atcaggtgat tctgagcaag gtgcaaaagt cgctggccga gaagagccga acccctgccg 7081 attcttctga ctcaaattcg gccttctcgc tgcgccagcc gctggtggtg caggctccag 7141 aagccgcaaa cacgaacaca ctcaacactg aagatcaaac ggtcaatggt gctgtgcaaa 7201 caacaaccac taggccatca gacgatcagg tggctgaaga gaccacaatc tttagcattg 7261 agaccgccac tgagccacag attagtacac aaataacaca agacagtgaa acactaacag 7321 ccaggccaat tggtgctgtg attatgggtc agcttggtct aaacacacaa acaacaacca 7381 ccgctgacaa cggcaatcag gaaaatactc aaacaacgag cacaattagc agtgctgaca 7441 acaacaacaa caacagccac caagaaaata ctcaaacaac aatcagtggc gctattagtt 7501 ccgaagctat tagtaacaag aacaacaacc acctgacact cgatacacaa acaacagtca 7561 ccaaaaacag tccagaaaat acgcaaacaa caacaaccac aaccacaatt ggcgcaatta 7621 gtggggctat tggtggcagc ataaatccga gcacacaagt aacaacaacc accaatagca 7681 atagcaccac cactagcagc agcagcacca caaccacagt gggcagcaaa gttagcgagg 7741 cagttagctt tagttcggag tcgcatgtgg tgcatcgcaa aaagatgggg cgcaaggggc 7801 gtggccgacg cctgcgcaac cgcaaaacaa cgacaacaac aacaaccaca gagacgccga 7861 ccacggtgga ggcgtcgctt gacgacacca ccacggtggt tccggaatag gtcacaaaaa 7921 gaaccacaaa acaaccagag aaaatcagcg tagttagtta tttctagtct tagcccttat 7981 cttatccaca gaagagagtc ttctgcgaaa ttaacccttt tgttgccaaa accttagata 8041 attggctgcg ttgctttggc ttaacaacaa caaccatggc aagaaaatca aaaatcaaat 8101 taagtaaaca accatttcgg ctgcttttaa actctttcca aatttcccag tgctgctgct 8161 tttaatttga atactctact atatatatct attttttttt ttgctatgta aattatttaa 8221 acaattcgta ttcttcgagc tgccatacct aaacaacaac aacacccaca caacatatac 8281 atccactcac acacattcgt tcacacatgc agatgcgaaa agtctttcct tggttcaaat 8341 atagaataga aatctagaaa tctagacaaa caacgaccct cagtggatgc aaaatcttga 8401 tcaacttgaa gtaactctta atggctttta ccaggcgcag ttctctctca caattctatc 8461 tctttgctaa tcaatttttt tcactctttc cccctctatc cgaaatactt taagtctagc 8521 tttagttgta aaatatttat gcacaacaat aaaataatga acaaaaagaa acaaa