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LOCUS XM_017157379 3955 bp mRNA linear INV 09-DEC-2024 (alpha-Man-Ia), transcript variant X5, mRNA. ACCESSION XM_017157379 VERSION XM_017157379.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017157379.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3955 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3955 /gene="alpha-Man-Ia" /note="alpha-Mannosidase class I a; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins" /db_xref="GeneID:108068030" CDS 340..2247 /gene="alpha-Man-Ia" /codon_start=1 /product="mannosyl-oligosaccharide alpha-1,2-mannosidase IA isoform X2" /protein_id="XP_017012868.2" /db_xref="GeneID:108068030" /translation="MCPKTSKTTPLLLIAGICFVIVLVGITGITLINNINLSNIIRLN EKVASDSVSNNENQIKELNYVNNHPRNVYLKLNASKEDEKEEEKMQKEQEPLESPQIS AVIGGSKLKVRDNQLKESSEAISLLPYPSPPSTFPTFPSPMDDSSPPLPFGGVKYNAS SGLIDYEKRNQVVKMMEHAWHNYKLYAWGKNELRPLSQRPHSASIFGSYDLGATIVDG LDTLYIMGLEKEYREGRDWIERKFSLDNISAELSVFETNIRFVGGMLTLYAFTGDPLY KEKAQHIADKLLPAFQTPTGIPYALVNTKTGVAKNYGWASGGSSILSEFGTLHLEFAY LSDITGNPLYRERVQTIRQVLKEIEKPKGLYPNFLNPKTGKWGQLHMSLGALGDSYYE YLLKAWLQSGQTDEEAREMFDEAMLAILDKMVRTSPGGLTYVSDLKFDRLEHKMDHLA CFSGGLFALGAATRQNDYTDKYMEVGKGITNTCHESYIRAPTQLGPEAFRFSEAVEAR ALRSQEKYYILRPETFESYFVLWRLTHDQKYRDWGWEAVLALEKHCRTAHGYCGLRNV YQQEPQKDDVQQSFFLAETLKYLYLLFSDDSVLPLDEWVFNTEAHPLPIKGANAYYRQ APVTLPASNAS" misc_feature 721..2184 /gene="alpha-Man-Ia" /note="Cyclases involved in the biosynthesis of lantibiotics, and similar proteins; Region: LanC_like; cl04955" /db_xref="CDD:471159" polyA_site 3955 /gene="alpha-Man-Ia" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 accgcattcg gttcgttctg ctttcgcctt ctgccgcctc gtgcacgcgc gaaaaattcc 61 gaaaaaaaac aacaacagaa aaaaagaaaa ggaagaaatt tgaagacatc catacacaca 121 ctcgccgcaa gacaacatag aatataaata caaataaaaa caaacagagg acaaactatt 181 agccataacg gagcagaaac aaattcattt agttataaat acaatgtgtc acgaaaacgc 241 caaccctgaa atagtggact ttcgagcgag ccaattgaga tagatgaata gaaatagaaa 301 tagaaatcaa aatcaagcaa ggaaatcaaa taagtgaaaa tgtgcccgaa aacgtcgaaa 361 accacgccgc tgctgctgat cgcgggaatt tgttttgtga tcgtgctagt gggcatcacg 421 ggcataaccc tgatcaacaa cattaaccta tcgaatatca ttcgattgaa cgagaaggtg 481 gccagcgata gtgtcagtaa caacgagaat cagatcaagg agctcaacta tgtgaacaat 541 catccgcgga atgtgtatct caagctgaat gccagcaagg aggacgaaaa ggaggaggag 601 aagatgcaga aggagcagga gccactggaa tcgccccaga tatccgccgt tattggtggc 661 agtaagctga aagtccggga taatcaattg aaggagtcgt cggaagccat ttctttgctt 721 ccatatcctt ctcctccttc gacttttccg acttttccct cgcccatgga cgactcctcg 781 ccacctttgc ccttcggcgg ggtcaagtac aacgcctcca gcggtttgat tgattacgaa 841 aagcgaaacc aagtcgtcaa gatgatggag catgcgtggc acaactacaa gttgtatgcc 901 tggggcaaga acgagctgcg tccgctatcg cagcgcccgc attcggccag tatctttgga 961 tcctacgacc tgggcgccac gatcgtcgac ggcctggaca cgctgtatat catgggactg 1021 gagaaggagt atcgcgaggg tcgcgactgg atcgaacgca agttctcgct ggacaatatt 1081 agcgccgagc tgagtgtctt cgagacgaac attcgatttg tgggcggcat gctgacgctg 1141 tacgccttca cgggcgatcc gctgtacaag gagaaggccc agcatatcgc cgacaagctg 1201 ctgcccgcct tccagacgcc cacgggcatt ccctatgcgc tggtcaacac caagaccggt 1261 gtggccaaga actacggctg ggcgtccggc ggcagctcca tcctgtccga attcggcacc 1321 ctgcacttgg agttcgccta cctgagcgac attaccggga atccactgta ccgggagcga 1381 gtccagacca ttcgccaggt gctcaaggag atcgagaagc cgaagggcct gtaccccaac 1441 ttcctcaatc caaagacggg caaatgggga cagctccaca tgtccttggg cgccctgggc 1501 gatagctact acgagtactt gctgaaggcc tggctgcaat ccgggcaaac ggacgaggag 1561 gcccgcgaga tgttcgacga ggcgatgctg gccattctgg acaagatggt gcgcaccagt 1621 cccggcggcc tgacctatgt ctccgacctc aagttcgatc ggctggagca caagatggac 1681 catttggcct gcttctcggg tggcctcttt gctttgggag ctgccacgcg tcagaatgat 1741 tatacagaca agtacatgga ggtgggcaag ggcattacga acacctgcca cgagagctac 1801 attcgagcac ccactcagct gggccccgag gcctttagat tcagtgaagc cgtggaggcg 1861 cgagctctga gatcgcagga gaagtactat atcctccggc cggagacttt cgagagctac 1921 tttgtgctgt ggcgcctcac gcacgaccag aagtaccgcg actggggctg ggaggcggtc 1981 ctcgccctgg aaaagcactg ccgcacggcg cacggttatt gcggcctgcg caatgtctac 2041 cagcaggagc cgcagaagga cgatgtccag cagagcttct ttctggccga aacactcaag 2101 tacctgtact tgctgttctc agacgactcg gtgctgccgc tggacgagtg ggtgttcaac 2161 acggaggccc atccgctgcc gatcaagggg gcgaatgcgt actacagaca ggcgcccgtc 2221 acgctgccgg cctcgaatgc ctcgtaaacg ggcgccctgc tgcgccgctg gctgttcggc 2281 ctgtccctag cactgcacct taattagttc tcgaaaattg catagatata tgtgtacgcg 2341 atcgcaactc tatttttttt ttctttgtcc taagttttta gttagtttac gtgatgatat 2401 gatgatacga tgacaactgc gtacgaaaga tattgtatgt ttacaaaaaa aaccaagtac 2461 atacgagata ctttcaatgt aacatattta taaagcttgc acatatatag gaacttaaac 2521 ttaaacggat atatcgtagt ttagtcctta actgtttgca caagtttctc cgagtctctc 2581 tctctctttt ttatttacct tatgaggtat aaggtatatt ataatccaaa tagttgactg 2641 aggtggaagg ctggtaaaaa ggagacctca atttccattt aaaagcgaat gacgtaggcg 2701 taggcaaaca ctcttgatat taattatgat atgatatacg gatatatgta tgtgtaaatg 2761 taaaactcag gtgttcttat tatgatttac cttgcgctca cacaaggctc tttctcacta 2821 actctctcag ctacgtaact atctctacag aagcattcta tacgcaattc tcgatctgca 2881 tctgccacta tatctcggtg tggattcatg gatcgatagg tctactgata gatctgctga 2941 tttctgattt ccaattcgaa tctttgacca ctttgttttg tatataattt ctattgactt 3001 tcctcgcaaa atgaaggcag aagaaaatcg aattgatatt tatacaagta tattcttaca 3061 cattattgtt taccttgtag cctaaatatt taaatataaa tctaatatag agtctagctt 3121 actttatgtg acgaaacaaa tgtaacgcga attaccttaa atccagaaca tcaagcgaaa 3181 cgaaagcaaa tgaaatatat ataaaaatat acctaaataa atatatattt gtatttaatt 3241 aaatcaaata aaacgtaggc aattgttaaa ataaattaat tttacgatgg cacgagccga 3301 gcgaatggta atttaatttt taacaactgt aaaggttttt tataatatta ataataatta 3361 taataataac aatacccata ataatcatat ttataattct atttataact gtaatccata 3421 gactaagcca caagcatcgc atgataaatg aaatatagaa gttatttaat tgtttttttt 3481 ttgtaaccta cgcagcttgg gctgtgtaaa gtgatttaac aaaagtaaaa ataacataaa 3541 acctaagcta agaccctaat gtaaaaccga aaaattttaa tgaaaaattt taagaaatta 3601 aaataatatc aaacttaatt aaatcgataa atgagaaacc ctaaaaatca ccagctaatg 3661 aatgtaaaac aagccgaggg ctaaagtaaa ttaaaatcga atctaactaa gcgtaaattt 3721 agtccttaga gccaactttt tttgtttaga tcaaattaga attgaggcca atagcgagat 3781 atatatgtaa atgatatatc atccgatggc aatgccccat gcatagattt gaatggcagt 3841 ttgtaaatgc atcagacata atacgttcgt cgactgcagt ccctgagctg cggaagatga 3901 aaattgtatt ttgcctaatc ataagtttaa taaagatcta ataattaact taaaa