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LOCUS XM_017157374 4042 bp mRNA linear INV 09-DEC-2024 (alpha-Man-Ia), transcript variant X2, mRNA. ACCESSION XM_017157374 VERSION XM_017157374.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017157374.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4042 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..4042 /gene="alpha-Man-Ia" /note="alpha-Mannosidase class I a; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins" /db_xref="GeneID:108068030" CDS 313..2334 /gene="alpha-Man-Ia" /codon_start=1 /product="mannosyl-oligosaccharide alpha-1,2-mannosidase IA isoform X1" /protein_id="XP_017012863.2" /db_xref="GeneID:108068030" /translation="MYRISPIGRKSNFHSREKCLIGLVLVTLCFLCFGGIFLLPDNFG SDRVLRVYKHFQKAGPEIFIPAPPLAAHAPHRSEDPHFIGDRQRLEQKIRAELGDMLD EPPAAAGGGGGGEQPGQFQALAQQAQAPAPVAALADQQEADEEGQQHAAIPVLAAPVQ GDTAASQVSASHPQSPAQQSNQQQLPLGGGGNDQAADTLDATLEERRQKVKEMMEHAW HNYKLYAWGKNELRPLSQRPHSASIFGSYDLGATIVDGLDTLYIMGLEKEYREGRDWI ERKFSLDNISAELSVFETNIRFVGGMLTLYAFTGDPLYKEKAQHIADKLLPAFQTPTG IPYALVNTKTGVAKNYGWASGGSSILSEFGTLHLEFAYLSDITGNPLYRERVQTIRQV LKEIEKPKGLYPNFLNPKTGKWGQLHMSLGALGDSYYEYLLKAWLQSGQTDEEAREMF DEAMLAILDKMVRTSPGGLTYVSDLKFDRLEHKMDHLACFSGGLFALGAATRQNDYTD KYMEVGKGITNTCHESYIRAPTQLGPEAFRFSEAVEARALRSQEKYYILRPETFESYF VLWRLTHDQKYRDWGWEAVLALEKHCRTAHGYCGLRNVYQQEPQKDDVQQSFFLAETL KYLYLLFSDDSVLPLDEWVFNTEAHPLPIKGANAYYRQAPVTLPASNAS" misc_feature 922..2271 /gene="alpha-Man-Ia" /note="Cyclases involved in the biosynthesis of lantibiotics, and similar proteins; Region: LanC_like; cl04955" /db_xref="CDD:471159" polyA_site 4042 /gene="alpha-Man-Ia" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tcatcgggaa gccgttccgt ttcaccatca ctggagtggc gagtaacttg ttattaaaaa 61 aacgtaagcc cgtcagattt aaacgcgaat ctcgaaaagg cctcgatggt ttgacggctc 121 ggctgccaat tgaatcgaat cgttcggttt gtgtgtgaaa acataaagca taagaaatca 181 agactcctgg aaaacagaaa aacaaacctt aaatgcccga gaagactgca gtgaaacaat 241 aaaaaaaaaa ccccaaaaca agctgccaaa caggataaca cgcctaacta aataagaaaa 301 ccaaaatcca ccatgtatcg catcagtcca attggacgca aatcgaactt ccactcgcgc 361 gagaaatgtc tgattggact cgtcctggta acgctgtgct tcctctgctt cggcggcatc 421 ttcctgctgc cggacaactt cggcagcgac cgcgtcctgc gcgtctacaa gcacttccag 481 aaggccggtc ccgagatctt catcccggcc ccgcccctcg ccgcccacgc cccccatcgc 541 agcgaggatc cgcactttat cggcgatcgc cagcgtttgg agcaaaagat ccgtgcggaa 601 ttgggcgata tgctggatga accacctgcg gctgccggcg gaggaggagg cggggaacag 661 ccaggacaat tccaggcact cgcccaacag gcacaagctc ccgctcccgt cgccgctcta 721 gcggatcagc aggaggccga cgaggagggt caacagcacg ccgccattcc cgttctggcc 781 gctccagttc agggcgacac tgccgccagc caggtatccg cctcccatcc acaaagtccc 841 gcccagcaga gcaaccaaca gcaactgcct ttgggaggcg ggggaaatga tcaggcggcg 901 gacacactgg acgccacgct ggaggagcga cgtcagaagg tcaaagagat gatggagcat 961 gcgtggcaca actacaagtt gtatgcctgg ggcaagaacg agctgcgtcc gctatcgcag 1021 cgcccgcatt cggccagtat ctttggatcc tacgacctgg gcgccacgat cgtcgacggc 1081 ctggacacgc tgtatatcat gggactggag aaggagtatc gcgagggtcg cgactggatc 1141 gaacgcaagt tctcgctgga caatattagc gccgagctga gtgtcttcga gacgaacatt 1201 cgatttgtgg gcggcatgct gacgctgtac gccttcacgg gcgatccgct gtacaaggag 1261 aaggcccagc atatcgccga caagctgctg cccgccttcc agacgcccac gggcattccc 1321 tatgcgctgg tcaacaccaa gaccggtgtg gccaagaact acggctgggc gtccggcggc 1381 agctccatcc tgtccgaatt cggcaccctg cacttggagt tcgcctacct gagcgacatt 1441 accgggaatc cactgtaccg ggagcgagtc cagaccattc gccaggtgct caaggagatc 1501 gagaagccga agggcctgta ccccaacttc ctcaatccaa agacgggcaa atggggacag 1561 ctccacatgt ccttgggcgc cctgggcgat agctactacg agtacttgct gaaggcctgg 1621 ctgcaatccg ggcaaacgga cgaggaggcc cgcgagatgt tcgacgaggc gatgctggcc 1681 attctggaca agatggtgcg caccagtccc ggcggcctga cctatgtctc cgacctcaag 1741 ttcgatcggc tggagcacaa gatggaccat ttggcctgct tctcgggtgg cctctttgct 1801 ttgggagctg ccacgcgtca gaatgattat acagacaagt acatggaggt gggcaagggc 1861 attacgaaca cctgccacga gagctacatt cgagcaccca ctcagctggg ccccgaggcc 1921 tttagattca gtgaagccgt ggaggcgcga gctctgagat cgcaggagaa gtactatatc 1981 ctccggccgg agactttcga gagctacttt gtgctgtggc gcctcacgca cgaccagaag 2041 taccgcgact ggggctggga ggcggtcctc gccctggaaa agcactgccg cacggcgcac 2101 ggttattgcg gcctgcgcaa tgtctaccag caggagccgc agaaggacga tgtccagcag 2161 agcttctttc tggccgaaac actcaagtac ctgtacttgc tgttctcaga cgactcggtg 2221 ctgccgctgg acgagtgggt gttcaacacg gaggcccatc cgctgccgat caagggggcg 2281 aatgcgtact acagacaggc gcccgtcacg ctgccggcct cgaatgcctc gtaaacgggc 2341 gccctgctgc gccgctggct gttcggcctg tccctagcac tgcaccttaa ttagttctcg 2401 aaaattgcat agatatatgt gtacgcgatc gcaactctat tttttttttc tttgtcctaa 2461 gtttttagtt agtttacgtg atgatatgat gatacgatga caactgcgta cgaaagatat 2521 tgtatgttta caaaaaaaac caagtacata cgagatactt tcaatgtaac atatttataa 2581 agcttgcaca tatataggaa cttaaactta aacggatata tcgtagttta gtccttaact 2641 gtttgcacaa gtttctccga gtctctctct ctctttttta tttaccttat gaggtataag 2701 gtatattata atccaaatag ttgactgagg tggaaggctg gtaaaaagga gacctcaatt 2761 tccatttaaa agcgaatgac gtaggcgtag gcaaacactc ttgatattaa ttatgatatg 2821 atatacggat atatgtatgt gtaaatgtaa aactcaggtg ttcttattat gatttacctt 2881 gcgctcacac aaggctcttt ctcactaact ctctcagcta cgtaactatc tctacagaag 2941 cattctatac gcaattctcg atctgcatct gccactatat ctcggtgtgg attcatggat 3001 cgataggtct actgatagat ctgctgattt ctgatttcca attcgaatct ttgaccactt 3061 tgttttgtat ataatttcta ttgactttcc tcgcaaaatg aaggcagaag aaaatcgaat 3121 tgatatttat acaagtatat tcttacacat tattgtttac cttgtagcct aaatatttaa 3181 atataaatct aatatagagt ctagcttact ttatgtgacg aaacaaatgt aacgcgaatt 3241 accttaaatc cagaacatca agcgaaacga aagcaaatga aatatatata aaaatatacc 3301 taaataaata tatatttgta tttaattaaa tcaaataaaa cgtaggcaat tgttaaaata 3361 aattaatttt acgatggcac gagccgagcg aatggtaatt taatttttaa caactgtaaa 3421 ggttttttat aatattaata ataattataa taataacaat acccataata atcatattta 3481 taattctatt tataactgta atccatagac taagccacaa gcatcgcatg ataaatgaaa 3541 tatagaagtt atttaattgt tttttttttg taacctacgc agcttgggct gtgtaaagtg 3601 atttaacaaa agtaaaaata acataaaacc taagctaaga ccctaatgta aaaccgaaaa 3661 attttaatga aaaattttaa gaaattaaaa taatatcaaa cttaattaaa tcgataaatg 3721 agaaacccta aaaatcacca gctaatgaat gtaaaacaag ccgagggcta aagtaaatta 3781 aaatcgaatc taactaagcg taaatttagt ccttagagcc aacttttttt gtttagatca 3841 aattagaatt gaggccaata gcgagatata tatgtaaatg atatatcatc cgatggcaat 3901 gccccatgca tagatttgaa tggcagtttg taaatgcatc agacataata cgttcgtcga 3961 ctgcagtccc tgagctgcgg aagatgaaaa ttgtattttg cctaatcata agtttaataa 4021 agatctaata attaacttaa aa