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LOCUS XM_017157349 1083 bp mRNA linear INV 09-DEC-2024 (LOC108068009), mRNA. ACCESSION XM_017157349 VERSION XM_017157349.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017157349.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1083 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..1083 /gene="LOC108068009" /note="protein Loquacious-like; Derived by automated computational analysis using gene prediction method: Gnomon." /db_xref="GeneID:108068009" CDS 82..1083 /gene="LOC108068009" /codon_start=1 /product="protein Loquacious-like" /protein_id="XP_017012838.2" /db_xref="GeneID:108068009" /translation="MDQKKTQDPKEDHGHSTGGEVKEESLPNPDFKATEEELRFLREA SASKQPVALLQELLSRRSLVPTYELLQTEGSGAEVNFWFRVFFKDKEVTHFAVGSGRS KKIGKHEAARLLIETLTGTPNGGSNRQNTLEIVDEHSIRDLNEICVKRRWASPVYESE DRMLEEKQHRVICLVQEFSEVGTGWTRKAAKRMAAQKMCTRLLGNSGEPKDHGEPKNQ ASQQSQKSPKAPMGPKMMGLRKTCLKSTKIDFKKLLTEIAVENQFEVTYVDIEETTFS KQFQCLVLICMAPVGVCHGSGASMEEARREAARNGLEYLKMIILGGESIEEAIAKLN" misc_feature 223..441 /gene="LOC108068009" /note="double-stranded RNA binding motif (DSRM) superfamily; Region: DSRM_SF; cl00054" /db_xref="CDD:444671" misc_feature order(244..249,253..255,322..324,385..393,400..402) /gene="LOC108068009" /note="RNA binding site [nucleotide binding]; other site" /db_xref="CDD:380679" misc_feature 493..687 /gene="LOC108068009" /note="double-stranded RNA binding motif (DSRM) superfamily; Region: DSRM_SF; cl00054" /db_xref="CDD:444671" misc_feature order(511..516,520..522,586..588,637..645,652..654) /gene="LOC108068009" /note="RNA binding site [nucleotide binding]; other site" /db_xref="CDD:380679" misc_feature 826..1029 /gene="LOC108068009" /note="third double-stranded RNA binding motif of PRKRA, TARBP2 and similar proteins; Region: DSRM_PRKRA-like_rpt3; cd19864" /db_xref="CDD:380693" misc_feature order(826..828,832..837,844..849,856..861,880..882, 910..918,922..924,928..930,973..984,991..993) /gene="LOC108068009" /note="putative RNA binding site [nucleotide binding]; other site" /db_xref="CDD:380693" misc_feature order(862..864,895..903,919..927,931..933,937..945, 949..957,961..966,1009..1011,1018..1023) /gene="LOC108068009" /note="Dicer interface [polypeptide binding]; other site" /db_xref="CDD:380693" ORIGIN 1 tttttttgta aagctgtcaa tgcattcgat caaaaatcga acgacgactg tatctttaat 61 taataaaaga gccacggaaa tatggatcaa aagaaaacac aagatcctaa ggaggatcat 121 ggccactcca ctggtggaga ggtaaaagag gaaagtttgc ccaatccgga cttcaaggcc 181 accgaagagg agctgaggtt ccttcgcgag gccagcgcct caaaacaacc cgttgccctg 241 ctgcaggagt tgctatcccg ccgcagcctc gttcccacct acgagctgct ccagaccgag 301 ggatccggtg ccgaggtgaa cttctggttt cgcgtcttct tcaaggacaa ggaagtcact 361 cacttcgccg ttggttccgg gcgctccaaa aaaattggca agcatgaggc tgctcggctg 421 ctcatcgaaa ccctgactgg aacacccaac ggtggttcca atcgtcaaaa tactttagaa 481 atcgtcgatg agcattcgat ccgcgatctg aacgagatct gcgtgaaacg ccgctgggct 541 tccccggttt acgaatcaga ggacaggatg ctcgaggaga agcagcacag ggtcatttgc 601 ctggtccagg agttcagcga ggtgggcacg ggatggacca ggaaggcggc caagcggatg 661 gccgcccaga aaatgtgcac tcgcctactg gggaattctg gtgaaccgaa ggatcatggt 721 gaaccgaaaa accaggcatc gcagcaatcg cagaagagcc caaaagctcc aatgggacca 781 aaaatgatgg gcctacggaa gacctgcctg aagagcacca agattgactt caagaaactg 841 ctgaccgaga tcgctgtgga gaatcaattt gaggtcacct acgtggacat cgaggagacc 901 accttctcca agcagtttca gtgcctggtc ctcatctgca tggcgccagt gggcgtctgt 961 cacggcagtg gtgcgtcgat ggaggaagct cggagggagg ccgccaggaa tggccttgaa 1021 tacctgaaga tgatcatcct tggtggcgag agtattgaag aagcgattgc caagctcaac 1081 tga