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LOCUS XM_017156974 1306 bp mRNA linear INV 09-DEC-2024 transcript variant X3, mRNA. ACCESSION XM_017156974 VERSION XM_017156974.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017156974.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1306 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..1306 /gene="Ctr1A" /note="Copper transporter 1A; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:108067755" CDS 169..870 /gene="Ctr1A" /codon_start=1 /product="high affinity copper uptake protein 1 isoform X1" /protein_id="XP_017012463.2" /db_xref="GeneID:108067755" /translation="MDHAHHHDHMHHAAAMETTSPSTALNDMIPDDSDLQAALAGGHG HDHMSHEHMGHGMGHHGGSGTGMEHMMPMAFHFGYNETILFSWWHIETVAGLVGSMIA IFLLALMYEGLKYYREYLFWKTYNLLEYRPVTGPQRNPEAPRIPSPAAAAPSPVQYVG EVVHKQPPSMLSVNHLLQTLLHVLQVTLSFLLMLIFMTYNVWLCLMVVLGAAVGYFLF CWKKSVIVDVTEHCH" misc_feature 385..822 /gene="Ctr1A" /note="Ctr copper transporter family; Region: Ctr; pfam04145" /db_xref="CDD:461194" polyA_site 1306 /gene="Ctr1A" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cactactatt aaataaaaaa aacatatgtt cccaattaat tcatcaaacc aacaatcgtg 61 cgaacaagtt gtctgcgggc ggacgtggtg cacattttgt tttgttttta tttaggaaat 121 aacataactc attaatcgcg aattcgcagt gggaagacat cagcagttat ggaccacgcc 181 catcatcacg atcatatgca ccacgcggca gcgatggaaa ccacctcgcc cagcacggcc 241 ttgaatgaca tgattcccga cgacagtgat ttgcaagcag ctctggcggg cggtcacggt 301 cacgatcaca tgagtcacga gcacatgggt cacggaatgg gtcaccacgg tggctccggc 361 acgggaatgg agcacatgat gcccatggcg ttccactttg gctacaacga gacgatcctc 421 ttctcctggt ggcacatcga aacggtggcc ggtttggtgg gctccatgat cgccatcttc 481 ctgctggccc tgatgtacga gggcctcaag tactatcggg agtatctgtt ctggaagacg 541 tacaatctgc tggagtatcg cccggtgacg gggccccaga ggaacccgga ggcgccgcgg 601 attccctcgc cggcggcagc ggctccctcg cccgtgcaat acgtgggcga agttgtgcac 661 aagcaaccac cttcgatgct gtcggttaac cacctgctcc agacgctgct gcacgtgctc 721 caggtgaccc tgtccttcct gctcatgctg atcttcatga cctacaacgt gtggctctgc 781 ctgatggtcg tcctgggcgc cgccgtgggc tacttcctct tctgctggaa gaagtcggta 841 atcgtggacg tcaccgagca ctgtcactaa cagaggaccg ccggaagcct cagccggcga 901 tgtctcacgg cggaggaggc ggaggcagag gagcagctgt ccatctgaac ggaaggcgga 961 ggcgttggtg ctaggcttac caccggaatc accggaagct cgcggcccca cagaaaaccc 1021 cacacacttc aacacacacc ccctgccact tgctattctc tataactact cctaaactct 1081 ttaagatttt gtaagtcgaa agtgtaaagt acgcaagaga gaacaaattg agcgactggc 1141 gagcgaattg tataaagtta agcaatgtta gtactcaatc tatgtcgcag gattccccga 1201 aaagcaaata cttttttttt atcattatta ttatacacca ttttgtatcc ctattatacg 1261 atcatgatta ttattatttg gtaaataaaa tccaacctct tttata