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LOCUS XM_017156915 3784 bp mRNA linear INV 09-DEC-2024 (LOC108067728), transcript variant X3, mRNA. ACCESSION XM_017156915 VERSION XM_017156915.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017156915.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3784 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3784 /gene="LOC108067728" /note="uncharacterized LOC108067728; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108067728" CDS 895..3783 /gene="LOC108067728" /codon_start=1 /product="uncharacterized protein isoform X3" /protein_id="XP_017012404.2" /db_xref="GeneID:108067728" /translation="MEPDPNGIKIEPSLDQQQYATHVLAINGSNARLLIEHPSALLVP LSSHHQLQLQQQQQQQQQQQHVQQQHQQQQQQQQFQQQQQQHLHQQQQDQLQFQQQHL QLYAHTPLKQQQLQQQQQQQQQQQQEPTPLGPTSSASSASLTGASTTGGHQQRWNESP EARQRRLARNAERMRERRQRESEDEYRKRLLRNAEANRQRRQNESDIERAMRLVRNAA RQRLRRAMESPDQRAKRLAKLAERMRMYRASETNDQRKQRLAEMAARARQRIANESPE ERKERLRKLNDYAKKAASNAATTTTTDEAGTPQPTEEQQQQHLVTAAAYQQHQALAGV EYMGSGMFLAPGSLRPPMQLKQEPQTPQQQQQQQINQQLQQQQHQRYTITGQQQQQVT AALLEGTEPGSIFVQQIYGDDGGKGTAKLLQAHVPHFSIAGGQLELYPHKYAAKKQEL QSDGDAPGSAGGNDNSGSVSLGHNQETKVIVTTASGEQKLLKATPGQAQQLYQQFPYL ATFPSPSTTTTTSGGGGGGNNVVTAGTTTAAGGTTYYPMYHNGFQIGIGPNPVPPPFT PVNFASGGGHSPSGGQYNILAANPTLTVTGLGQQQQAEPPPQIVSSTGSTTTTTAGRG RPRKHPLASEEQLKVNSLLEQELNQMLAAPQLATSTPRRGRPLSHSSDHLSQIHVHST ADGDSRTQVTPMTTTTTTPRRSGANKYETEEEKRLRLDKMAAHQRAVRANETPEQRAT RLQKLSERARLKRAQIRATENTDERKERLSKQAEYARMRRMRSHTPRSSSATSTEFRA KTEEEDEEDNEDEQEQQLYGDAEAVSVTGTGSDGGFVTVVKADDDEDEGSPGDVSNDH ELPSLQLQHHELQQLEQQLVQQQQQQQHHEAIVLNQQHRLVTISQQQQHLHQQQQQSH PGFSKLQVASGGGSAGGAPGSGGGNGTGAPENNDMLKILEPIIVMKTK" misc_feature <1360..>1746 /gene="LOC108067728" /note="Family of unknown function (DUF5923); Region: DUF5923; pfam19343" /db_xref="CDD:466049" ORIGIN 1 cagtgtgacc aaacgcgatg gattaataca aaaaaaaaaa gaaaatgaaa acaacagata 61 taaaactaag taaattcaat taaaagaaca gaacagtgcc acgacctgcg aaagcgcagc 121 aaaatagagt gcaaatcaga gacaatccga tccggtcgga agtggaagcg gaagatatat 181 atgccagctg tgtggtaaat ccccgctatt tgcagccaaa gtcggtagct acgagcgaca 241 gaagcgccgc cagtccagtt cttaacccac cagaggctgc gaaaacaacg cttaaatgga 301 actaaatcgc agagggttaa ggtttgtgcg aaaggcaaaa taaggagcgg aaaaaaactc 361 gcacacacgt acacgcagcg gcggcgtatg tgtgagtgtg tgtgctcggc agtgcgtgtg 421 tgtgcgtgcc gcatgggtgt gtgtgtataa tcatgtgaaa aatcgattgg cagcgcagca 481 gcagcgcggc ggcggcgcca attgtcactt actcgaaaga agaagcacgc tttttcaaaa 541 gaacgcgaaa aaagctaaag aacccagaac gcatatcaaa tcaaggagca ggagcaggaa 601 agaaatgatc gatttagcaa aagtcagcga tcggatcgcc gcaaagtccc gctgagagag 661 agcgagagcg agagaggaat aacacagcag cagaagcaca tatttatata acttggcagc 721 aaaagagcgg gagagtgcga gggagagagc aagagcgcgg cccctagatg ttatcgaaac 781 aatcggaagg actgcgctca tcctttcgat aaccacacta cacaccactg cactcctgag 841 ccaccgatag acgacaattg cgattgttgt tgcccccggc ttttgaccaa gaatatggaa 901 ccagatccca atgggataaa aatagagccc tcactcgatc agcagcagta cgccacccat 961 gtgctggcca tcaatggctc caatgcccgc ctcctcatcg agcatccctc agcattgttg 1021 gtacccctct cctcgcatca ccagttgcag ttgcaacagc agcaacagca gcagcagcag 1081 caacagcacg tgcagcagca acaccagcag cagcagcagc agcaacagtt ccaacagcag 1141 cagcagcagc atctccacca gcagcagcag gatcaactgc agttccagca acagcacctc 1201 cagctttatg cccacacccc actgaagcag caacagttgc aacagcaaca gcagcagcag 1261 cagcagcagc aacaggagcc cactcccctg ggacccacga gcagcgccag cagcgcctcc 1321 cttacaggcg cctccaccac tggcggccac cagcagcggt ggaacgagag tcccgaggct 1381 cgccagcgcc gtctggccag aaatgctgag aggatgcggg agcgacggca gcgcgagagc 1441 gaggacgagt accggaagcg gctgctccgg aatgcggagg ccaataggca aaggcgccag 1501 aacgaatcgg acatagagcg agccatgcgg ctggtgagga atgcggccag gcagcggctg 1561 cgaagggcca tggagtcgcc cgatcagagg gccaagcggc tggccaagct ggccgaaagg 1621 atgcgcatgt accgggccag cgagacgaac gaccagcgga agcagcgact ggctgagatg 1681 gcggcgaggg cgcgccagag gatcgccaac gagtcgccgg aggagcgcaa ggaaagactg 1741 agaaagctga acgactatgc caaaaaggcg gccagcaacg cagcgacgac gacgacgacg 1801 gacgaggctg ggaccccgca gccaacggag gagcagcagc agcagcatct ggtgacggca 1861 gccgcctacc agcagcatca ggcgctcgcc ggcgtggagt acatgggctc gggcatgttc 1921 ctggcccccg gctccctgcg accgcccatg cagctcaagc aggagcccca gacgccgcag 1981 cagcagcagc agcagcagat caaccagcag ctgcagcagc agcagcatca gcggtacacc 2041 atcaccgggc agcagcagca acaggtcacc gccgccctgc tcgagggcac cgagccgggc 2101 agcatctttg tccagcagat ctacggcgat gacgggggca agggcaccgc caagctgctc 2161 caggcccatg tgccccactt cagcatcgcc ggcggccagt tggagctgta cccgcacaaa 2221 tatgccgcca agaagcagga acttcagtcg gacggcgatg ctccgggatc ggcgggcggc 2281 aacgataaca gcgggtctgt tagtctgggc cacaaccagg agaccaaggt gatcgtgacg 2341 acggccagcg gggagcagaa gctgctcaag gcgacgcccg gtcaggcgca gcagctgtac 2401 cagcagttcc cctacctggc caccttcccg agccccagca ccaccaccac caccagtgga 2461 ggcggcggag gagggaacaa tgtcgtgact gcgggcacca cgacggcagc cggcggcacc 2521 acctactatc cgatgtatca caatggcttc cagatcggca tcggaccgaa tccggtgccg 2581 ccgcccttca cgcccgtcaa ctttgccagc ggcggcggcc acagtccctc cggcggccag 2641 tacaacatcc tggcggcgaa tcccacgctc acggtcacgg gattgggtca gcagcagcag 2701 gcggagcctc cgccgcagat cgtcagcagc accggcagca ccaccaccac cactgctggt 2761 cggggcaggc cgcgcaagca tccgctggcc agcgaggagc agctgaaggt gaacagcctg 2821 ctggagcagg agctcaacca gatgctggcg gccccgcagc tggccaccag cacgccgcgt 2881 cgcggcaggc cgctcagcca ctcatcggat catcttagcc agattcatgt acattccacg 2941 gccgatggcg acagtcgaac gcaggtgaca ccgatgacga cgacgacgac gacgccgcga 3001 cgcagcgggg ccaacaagta cgagacggag gaggagaagc gcctgcgact ggacaagatg 3061 gccgcccatc agcgggcggt gcgggcgaac gagacgcccg agcagcgggc cacgcgcctc 3121 cagaagctca gcgagcgggc gcgactgaag cgggcgcaga tcagggccac cgagaatacg 3181 gacgagcgca aggagcggct gtccaagcag gccgagtatg cgcgaatgcg gcgcatgcgc 3241 agccacacgc cgcgcagcag cagcgccacc agcaccgagt tccgggccaa gaccgaggag 3301 gaggacgagg aggataacga ggacgagcag gagcaacagc tgtacggaga tgcggaggcc 3361 gtttcggtca ctggcacggg cagcgatggc ggcttcgtga cggtggtcaa ggcggatgac 3421 gacgaggatg agggatcacc gggcgatgtc tccaatgacc acgagctgcc ttccttgcag 3481 ctgcagcacc acgagctgca gcagcttgag cagcagttgg tgcagcagca gcagcagcag 3541 cagcatcacg aggcgattgt gctgaatcag cagcaccgac tggtcaccat cagtcagcag 3601 cagcagcatc tccaccagca gcagcagcag tcgcatcccg gcttcagcaa acttcaggtg 3661 gccagcggag gaggcagcgc aggaggagct cctggctctg gcggcggcaa tggaaccgga 3721 gcacccgaaa acaatgacat gctcaagata ctcgagccaa tcattgtgat gaagaccaaa 3781 tgag