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LOCUS XM_017156887 3589 bp mRNA linear INV 09-DEC-2024 (LOC108067716), transcript variant X2, mRNA. ACCESSION XM_017156887 VERSION XM_017156887.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017156887.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3589 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3589 /gene="LOC108067716" /note="synaptic vesicle glycoprotein 2C; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:108067716" CDS 728..2632 /gene="LOC108067716" /codon_start=1 /product="synaptic vesicle glycoprotein 2C" /protein_id="XP_017012376.2" /db_xref="GeneID:108067716" /translation="MVEGDSAKGKSESYNVEAGLQPNYNQSAASNQASNHPTGQLANS SATGNATSHIDNRAIIQPYSLGQGAKQPEYQFAADNRAYEPDSHASNGKQQDVERDAP DNGGHGGHGGHGKGKVGKGRKKSIPLPEPTAPICANFERAIELCGYGKFHYILLAICG LVSTSEEMDVISMSFILPSAECDLNLNTETKGWLNSIIFIGMMVGAYFWGSIADSFGR KKVLIVISFMNAFCIVASSFSQSYSFFMLFRFLNGAALGGSGPVIWSYFAEFQPKAKR GSMLSFMAAFWTFGNLFVASLAWLIIPRTIGVTTPYFTYNSWRIFLLVCSLPSFLVGF LLFYLPESPKFLLTRGKKDRALAIFRGIFVTNTKRRPDEYMVYDLEVDEKLLESNGSV KNKYSRMISGMVDHSRALFKSPILRFTIVSITINFTFHIGYYGLLMWFPELFNRFEEY EKEFPHNSASVCDVTDYVVQLGHDQSKNGTCVSDIPQSVFMESLISLASALPANLLAI LGMDMLGRKFFLIAGTMTAGICSALMYFVRNSVQNLVVSAIFSGAISAANAALDCLIT EVFPTKLRATGVAISMVAARLGGIIGNIVIAQLLDNYCPSPTFIVSGLLIGGGLMCLL LPNTTRKELN" misc_feature <1142..2611 /gene="LOC108067716" /note="synaptic vesicle protein SV2; Region: synapt_SV2; TIGR01299" /db_xref="CDD:130366" ORIGIN 1 accgcttgaa gtgcacgaac gttgatcgag agacgagaga ccgctccaaa agtaacgccg 61 acccctcaaa tctgccgcct gaaataaatc ccaatttttt ttggttcgac cttatatcga 121 tttcgatgtg ccccctgtgt gccagccaac ggttttaatg ttttcgccag ttgtttgcaa 181 caatccaaac cgaacctcgc cgagaactcc gcgcaccaag aacgccaaga tccactacaa 241 gcaaaaacac aaacagtcca ccactttcag ctgacgagca attttatgca aattttgatc 301 caccaacaac aaaaagtcaa aataaacaaa ccaaacaagc aaaacaaaca ccaaacaagt 361 gcaaaaacga aaaatataat acagggcgta accgcgcgca gtaaaggcaa atatttaacg 421 gtgcaaagag aatacatatt ttattaaaaa aaaaaacaaa aaacaaaata acaaaattaa 481 ttgccaaaca atcgagcctc gaacaaaaca caggtgccaa cataccccaa aagatctcca 541 ggtcagaaac gagccaacaa tcccaaaaaa aaaaaaaaaa cagccaacag accgttaagc 601 gaggcagaca caactgtacc catctaagca gagcttagag caaaaagcca acaaaaaacc 661 ccgcaagata atcccaattt cctttttgct acgcgcacaa gaagccaaaa aacccctgaa 721 ctatagaatg gtagaaggtg attccgcaaa gggcaaaagc gaatcctata atgtagaagc 781 tggactacaa ccaaactaca accagagcgc agcaagcaac caagcaagca accatcccac 841 tggccaactg gctaactcct cagccaccgg caacgcgacc tcgcacatcg acaaccgagc 901 gatcatccag ccgtactcct tgggccaagg agccaagcag ccggagtatc agttcgcggc 961 ggacaatcgg gcatacgagc ccgatagcca tgccagcaat ggcaagcagc aggacgtaga 1021 gcgggacgcc cccgataacg ggggtcacgg gggtcacggg ggtcatggca agggcaaggt 1081 gggaaagggc cggaagaagt ccataccctt gccggaaccg accgctccga tatgcgccaa 1141 tttcgagagg gccatcgaat tgtgcggcta tggcaagttc cattatatac tgctggccat 1201 ctgcggattg gtcagcacat cggaggaaat ggacgtcatc tcgatgtcct tcatcctgcc 1261 gtcggcggag tgtgatctga atctgaatac ggagaccaag ggatggctga actcgatcat 1321 cttcatcggc atgatggtgg gcgcctactt ctggggcagc atcgccgaca gcttcggtcg 1381 caagaaggtc ctcatcgtca tctcgttcat gaacgccttc tgcatcgtcg cctcgtcctt 1441 ctcgcagtcc tacagcttct tcatgctctt ccggttcctc aatggtgcag ctttgggcgg 1501 cagcggtcct gtgatctggt cgtacttcgc cgaattccaa ccgaaggcga agcgcggctc 1561 catgctgagc ttcatggccg ccttctggac gttcggcaac ctgttcgtgg ccagcctggc 1621 ctggctgatc ataccgcgaa cgatcggcgt gacgacgccg tacttcacct acaactcgtg 1681 gaggatcttc ctgctggtct gctcactgcc ctcgttcctg gtgggcttcc tgctcttcta 1741 tctgcccgaa tcgccgaaat tcctgttgac gcgcggcaag aaggatcgcg ccctggccat 1801 tttccgtggc attttcgtga cgaacacgaa gcgtcgtccc gacgagtaca tggtctacga 1861 cctggaggtc gacgagaagc tgctggagag caacggcagt gtgaagaaca agtacagccg 1921 catgatctcc ggaatggtcg accacagccg cgccttgttc aagtcgccca tcctgcgatt 1981 caccatcgtc tcgatcacga tcaactttac attccacatt ggctactacg gcctactgat 2041 gtggttcccg gagctcttca atcgcttcga ggagtacgag aaggaattcc cccacaactc 2101 ggcgagcgtt tgcgacgtca ccgactatgt ggtccaattg ggtcacgatc agagcaagaa 2161 cggcacctgc gtctcggata ttccgcagtc ggtgttcatg gagtcgctga tatcgctggc 2221 cagcgccctg cccgccaatc tgctggccat cctcggcatg gacatgctgg gcaggaagtt 2281 cttcctgatc gccggcacca tgaccgccgg catctgctcg gcgctgatgt actttgtgcg 2341 caactccgtc cagaatctcg tcgtctcggc catcttcagt ggcgccattt cggcggccaa 2401 tgccgccctg gactgcctca tcaccgaagt attccccacc aagctgaggg ccaccggcgt 2461 ggccatttcg atggtggccg cccgcctggg cggcatcatt ggcaacatcg tgatcgccca 2521 gctgctggac aactactgtc cctcgcccac gttcattgtg tcgggtctgc tcattggcgg 2581 cggtctcatg tgcctcctct tacccaatac gacgcgcaag gaactcaatt agatgtgcct 2641 aaataactaa cgatagctcc cgtacaccca gattacaaaa agacccatag aatcaaaacc 2701 atttgccttg ctttgagttg agattttgat actttttcat gtcacaaaga aaaagttttt 2761 ttttccaacc tacaaatatc aacttaacaa ggatttttaa agagttcaaa cactttcccc 2821 ttcaaaaaat cagccataga atgcccctcc cctcaagtaa tttccattcg ccccaatccc 2881 gccagaggat cggggtttat ctgtgtatat atggtatgtg tgtgctacaa tacacgatta 2941 tttgtatcgt cagtaattat ttaacgatag cgataacgat tttctttgtg tgtctaattt 3001 taaaagcccc cctctcccct tccccacccc tacgaaaata tctatctaac tatttggaat 3061 ttaaacgaac caaccaaaat cagaaacggg cataccaaac tgataagcaa agaaaacccc 3121 aagccagcga gaagatatag caggtaggat cgatgcaaat cgatgaatat gtttatgtac 3181 gatatgtaga gagtaatata tatatttggc aagcgccggc gccggctgaa gcagcagcag 3241 aggggctggg taacggtaaa gatacagata aagataaaga cccgagaagc agaacccaaa 3301 ataatcttat gggaggtcta tagtatcgct atcgttctcg ccaccctgct gtccgttatt 3361 gttgttatta ttgctattat taatgcatcc aatgtaaaac acatacgtat ataactttat 3421 ctatatatta aacatatatc aaaaccaaaa ttttttttgt tttttttttt cgtcatgtag 3481 gaccaaagca caggaagtga aagaatattt gtaaaattta gttacgttat tacaagttac 3541 gctacatata tacaacaaaa aactaataaa caaaaaaaga acaaaccac