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LOCUS XM_017156863 6315 bp mRNA linear INV 09-DEC-2024 (LOC108067704), transcript variant X3, mRNA. ACCESSION XM_017156863 VERSION XM_017156863.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017156863.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6315 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..6315 /gene="LOC108067704" /note="uncharacterized LOC108067704; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:108067704" CDS 653..4198 /gene="LOC108067704" /codon_start=1 /product="uncharacterized protein" /protein_id="XP_017012352.2" /db_xref="GeneID:108067704" /translation="MESDEQQQEVVGGSAPLCRICITTHHQQPNNNTNNTTASPANLP MIPIFGEDALWQKITTLANVKISKNDTLPQQVCVACAKSAISACVFKKKCEEADHFYR QQLRLQKIEGADPLETSASAGDQAKSSGCSSGSGSSSASGSGSGSSSSSSSSSDDEDE DNDQDQEQDQEQELDEVEAGEAGHKRLQNGYSPVINGHRGDGVQEEELMDDHHHAAGH EEEEQDEQDHHRNGLELAEVNPEDEDDDDVEEVNPMNHHHHHHDNNDDDGEITGHAGH PKEPFDFNSIRLMQEYMQHQMNKFPNGSAAGGHPDMELDLDQQQHHHHHHDDDDEDMS LPLIPEIELITPGDEAPADASNHNDLDLVNGVGVGVGVVQGMRGPGFQCPHCYQIFEM KQILKAHMQSVHGAPGPVYECSNCRKTYFYKRFLEKHIRRGRCVKKRRNQTRPMQCSD CHVLFPTGHHLGWHKRTGCPSKAAKMPLQQLFKQNIVQFNNFPKRIAAGGGGGGGGGA ARKPTAPELHINNRKLGLANKRKGRTRIKLDAKKIALAKQLILREATTTVIANELNIS RTFAWRLRKSLVNGVSLHERVVDPSQEEQHLQQLQQQQHHHHQQLQLQQQEEQQQQQR EREQHHLSSLPYSHLGLGLIKEERQDSEDEEQQQQQRQHHHHSLGLVDECGADEIGAE ETAGYMGDEDAVSGLLHNGGYDPDPDSDPIEHDPFEGTENHEHPANGSVSPAAKLVPP SGVPVPVPVQVHAAAAAAAAARSDVEVYKRLLAESQHFPHIVNAQQLQMQQQHRERER EQRDRERAREREREREQLQQQQKVHNGGMPMLTRYPPAVMHALPVNLSLRSMPPHMNS NESNGSSSSNTAAPVPVPVAGSSAATSTGATPTGKKPRKPNVFIDDEKYAMAKLLVAQ NSSTMEIARALNVSQMTAWKVRDAILKGVPLSYRNKRSDGRHSEEFSVKEQQQQQQQQ QEQQQRQQEMQRQQQQQMEQMELIKQQRQQQELLLQQQQQQQQQQQQQQQQQQQQLRH HSTPADTSHYQQQAAPKMLHPRRRLKAAERELRDKEITREILELIKEDSNIQYWKVSA RLAEKGINISPSSVCQKLKSMGIHRRWKPGDKPPMLAISQLKAATVAAAAAAAGLAGV GGSAGLAGNSFGLADDGYEQQQFDMGGHFLSAFTR" misc_feature 701..961 /gene="LOC108067704" /note="Zinc-finger associated domain (zf-AD); Region: zf-AD; smart00868" /db_xref="CDD:214871" misc_feature 1799..1864 /gene="LOC108067704" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature order(1814..1816,1820..1822,1826..1828,1832..1837, 1844..1849,1856..1858,1904..1906,1910..1912,1922..1927, 1934..1939,2009..2011,2015..2017,2021..2023,2027..2032, 2039..2044,2051..2053) /gene="LOC108067704" /note="putative nucleic acid binding site [nucleotide binding]; other site" /db_xref="CDD:275368" misc_feature 1889..1945 /gene="LOC108067704" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 1994..2053 /gene="LOC108067704" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" polyA_site 6315 /gene="LOC108067704" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ggcaggtacg gtacagacat tcaaggcaac tactttaaaa aaagcagtaa taaatacaat 61 tttacacatt cacattccat tttgattctg ttgtgtgtga aaaacttata agagaaaaac 121 aacaaaaaca acgaaaacca acggcaaata acaaaaagta tcaacggcaa caataacaac 181 aacaacaaca gtgagcagca tagcaaagca gcgaagtcaa cgtcaaaacc gaagaagaag 241 aagcaagata aatacatagc aatttcgact aaataaagtt taccaaacgt cgtcggtaca 301 atcggaacgt tccgttcctg cgtttcagtt cttcctttcc gttcgttccg cgcgctcctc 361 tctcgcgtga gagagagtgc tgccacttgt tgccggctcg gcttggggac actctctctt 421 cccattccat cattccatcg aagcacggat acgataacgc taccgattga tccaatccga 481 tcggatccga tctgttcgat ccacatccac ccactaccgg cggagatttg gaagcagtag 541 acgcctgaac cattggaaga ggcatgcagt tgatggccag cggttactcc tgcagcagct 601 ccatctcctt cagatccttc agttccagtt ccctccggtc caaactctcg cgatggagag 661 cgatgaacag cagcaggagg ttgtgggcgg aagtgcaccg ttatgtcgca tctgcatcac 721 cacccaccat cagcagccga acaacaacac caacaacacg acagcatccc cagccaacct 781 gccaatgata cccatcttcg gggaggatgc gctctggcag aagattacca cgctggccaa 841 cgtcaagatc agcaagaacg acactctacc gcaacaggtg tgcgtcgcct gtgccaagtc 901 ggctatttcg gcctgcgtgt tcaagaagaa gtgcgaggag gcggaccatt tttaccgcca 961 gcaactgagg ctccagaaga tcgagggcgc ggatccgctg gagacgagcg cctccgccgg 1021 cgaccaggcc aaaagcagcg gctgcagcag cggcagcggg agcagcagcg ccagcggcag 1081 tggcagcggc agttcctcca gcagcagttc ctcctccgac gacgaggacg aggacaatga 1141 tcaggatcaa gagcaggatc aggaacagga actggatgaa gtggaggccg gggaggctgg 1201 ccacaagcgg ctgcagaatg gctacagccc ggttatcaat ggccatcgag gtgatggcgt 1261 tcaggaggag gagctgatgg atgaccatca tcacgcagct ggccacgaag aggaggaaca 1321 ggatgagcag gatcaccatc gcaatgggct ggagttggcg gaggtaaatc ccgaggatga 1381 ggacgatgac gacgtggagg aggtaaatcc aatgaaccac caccatcacc accacgataa 1441 taacgacgac gatggcgaaa taaccggcca tgccgggcat cccaaggaac cgttcgactt 1501 caactcgatt cgcctgatgc aggagtacat gcagcatcag atgaacaagt tccccaatgg 1561 ctccgccgcc ggtggtcacc cggatatgga gctcgatctc gaccagcagc agcatcatca 1621 tcatcatcat gatgacgatg acgaggacat gtcgctgccg ctgatacccg agatcgagtt 1681 gatcacaccg ggcgatgagg cgccagcgga tgcctcgaat cacaatgact tggacttggt 1741 caatggcgtg ggcgtgggtg tgggcgtggt ccaggggatg cggggaccgg gcttccagtg 1801 cccccactgc tatcagatct tcgagatgaa gcagatcctc aaggcgcaca tgcagagtgt 1861 ccatggagca ccgggaccgg tgtacgagtg cagcaactgc cgcaagacct atttctacaa 1921 gcgtttcctc gagaagcaca tacgacgtgg tcgctgtgtg aagaagcgtc gcaatcaaac 1981 tcggcccatg cagtgctccg attgtcatgt cctcttcccc acgggccacc atttgggctg 2041 gcataagcgc accggctgcc cctcgaaggc ggccaaaatg cccctgcagc agcttttcaa 2101 gcagaacatt gtgcagttca acaatttccc caagcggatt gccgccggcg gaggaggagg 2161 aggaggaggg ggagcggcac gcaaaccaac ggctcccgag ctgcacatca acaatcgcaa 2221 actgggcttg gccaacaagc gaaagggacg cactcgcatc aagctggacg ccaagaagat 2281 tgccctggcc aagcagttga tactgcgcga ggccaccacc acggtgattg ccaacgagct 2341 gaacatctcg cgcaccttcg cctggcgcct gcgcaaaagc ctggtcaacg gtgtcagtct 2401 gcatgagcgc gtcgtggatc cctcgcagga ggagcagcac ctgcaacagc tgcagcagca 2461 gcagcatcat caccatcagc agttgcaatt gcagcagcag gaggaacagc aacagcagca 2521 acgcgaacgg gaacaacatc acttgagcag ccttccctac agccaccttg gcctgggtct 2581 catcaaagag gagcggcagg acagcgagga tgaggagcag cagcagcagc agcggcagca 2641 tcaccatcac tcgctcggtc tggtggacga gtgcggagcg gatgagattg gggccgagga 2701 aacggctggc tatatgggcg atgaggatgc cgtgagcggc ctgctccaca atggaggcta 2761 cgacccggat cccgattccg atcccatcga gcacgatccc ttcgagggca ccgagaacca 2821 tgagcatcct gcgaacggtt cggtttcgcc cgcagcgaaa cttgtgccgc catcgggggt 2881 tccggtaccg gtgcctgttc aggtccatgc tgctgccgcc gccgccgccg ccgctcggag 2941 cgatgtggag gtctacaagc ggctgctggc cgagtcgcag cactttcccc acatcgtcaa 3001 cgcccagcag ttgcagatgc agcagcagca ccgcgagcgg gagagggagc agcgggatcg 3061 cgagcgggca agggaaaggg agagggaaag ggagcaactg cagcagcagc agaaggtcca 3121 caacggtgga atgccgatgc tcactcgtta tccgcccgcc gtcatgcacg ccctgcccgt 3181 caacctgtcc ctgcgctcca tgccccccca catgaatagc aacgagagca acggcagctc 3241 cagcagcaac acggcggccc cagttcccgt tcctgttgcc ggctcatcgg cagccacctc 3301 gactggcgcc acgccgactg gcaagaagcc ccgcaagccg aacgttttca tcgacgacga 3361 gaagtacgcc atggccaagt tgttggtggc ccagaactcc tccaccatgg agatagccag 3421 ggccctcaat gtatcccaaa tgacggcctg gaaggtgcgc gatgccattc tcaagggagt 3481 gccgctctcc tatcgcaaca agcgatccga tggcaggcat tcggaggagt ttagcgtcaa 3541 ggagcagcag cagcaacagc agcaacaaca ggagcaacag caacgccaac aggagatgca 3601 gcgacagcag caacagcaaa tggaacaaat ggagctaatc aaacagcagc gtcagcaaca 3661 ggagttgcta ctccagcagc agcagcaaca gcaacagcag cagcaacaac agcagcagca 3721 gcagcaacaa caactgcgtc atcacagcac accggcggac acatcacact atcagcaaca 3781 ggcggcgcca aagatgctgc atcctcgccg ccgcctaaaa gcagcggaac gcgagctgcg 3841 cgacaaggag atcacacgcg aaatactcga gctgatcaag gaggacagca atatacagta 3901 ctggaaggtg tcggctcgcc tggccgagaa gggcatcaat atatcgccct cgtccgtctg 3961 ccagaagctc aagtcgatgg gcatccaccg gcgctggaag ccgggcgaca agccacccat 4021 gctggcgata agtcagctca aagcggccac tgtggcggcc gcagcggcgg cagctggcct 4081 ggccggcgtc ggcggaagcg ccggattggc cggcaacagc tttggcctgg cagacgacgg 4141 ctacgagcag cagcagttcg acatgggcgg gcactttctc agtgccttta cgcgctagac 4201 cagaagtcct gcccatctgg gcctacattt aaatactaca gtggattgta ggcatcgtag 4261 gcatcatttg actgggaaat tgtaggtcta aagagctgag ttttaagtta ttgaagcctt 4321 tgagggttga ttttggttta agatacattt cttttatgaa caaaattata agtagccaat 4381 ataaaaataa ttctactcgg cagctgttta gttttatgtt gaatgtcatt gagaaattca 4441 ttgcagatct accatttccc aggcgaaatg cctagaaatt tgcccacaat taccactgtg 4501 agtttaacat atatacattt ttgtttttcg agccacccta atccatatgc atagaccagc 4561 acagcaacaa caaggtgtat tttttatata gtatttgaaa gagagagagc gcgcttgaaa 4621 tgtatttgta tttgtaatcg ttatgagata gcatatattg tatgattctg tattagattt 4681 atatatccaa tatatatgct aagcattcct agaatgtcac acacacacac acaaagaaaa 4741 tgaaaaagaa aaacgcccat tccaagcgag gaaatgattt cctttcttta agttcagtag 4801 cttccttttc ctcttcctcc atccacacac acacacacaa acacacttag ctgataatgt 4861 aataatttaa ttaacatatt tattgatcgt atgtccttgt gagtgtgtgt gtgtgcgctt 4921 taactgagaa atgtatttaa agattttcac catttttaat ttatttattt tactcacgca 4981 tacacacaca cacacatata agcaattatt cagtactgaa ctttaattta gttaaattaa 5041 tgcatcaaac gaagaaataa caatcagaac aaagcaaacg gaagcagaac aaacagcagc 5101 tagagagaaa gttaagaaag ctagcaacat aagtgcaatt ataaactaca tgtgtaaacc 5161 taaagaacca gaagaatgta aaatgtttta cgtgtgaccg aaatagaaga taggagagcg 5221 agagaagggg agaaagagag ggaaaattgt ctatccaatt taagacctta gcaccactga 5281 acattttaga accaactttc atatcttcag atatcctaaa ctaaaagata tcttcatttt 5341 aaaacgctaa ctgatgaaaa acttgtgttt tttggttaaa agtgtagaaa gaaatgttca 5401 aatttaaaat aagtttaggt caattaaaac aacatttagt ttttacttta gaacgacttt 5461 tatacattcc caaagacata ccaaaatttt gtttagcact ataaacaggc tgaaaatcga 5521 aacatcaccc acaaaaagtt tgttttttgt gtgtgtttac agtggtgttg agccattagt 5581 taataacttt gattgggaga accaatttaa ggtttacact tcactcccca actttcctcc 5641 tcttctttct cctggtcgtt ttccatatag acagctactc cgaatccatc ctcccaacca 5701 agccccaatt tatgtaagaa agctatggaa acaaggcaaa cgatcaattt ttgaaaacgt 5761 cgtagcaaat tgttagttaa aaatgagaag aaaactaaat aacacaaaag atcaaaagaa 5821 aaaagatgga aaaatatgaa gacaagctga ggactcagaa ctgtatttat ttacagtcaa 5881 ttttaggaac atttatttta ttattattat ttttttgttg ttgtggatga aattctattc 5941 gtctgcgatt tatttttgta tagcttttaa ggtccgaagt tagagcaaaa gagatagcaa 6001 gagagagcga gtgaaggttg atatagtatt ttttttatat ttttgtacaa tttgaaattg 6061 taactgcttt ttatcaatca atcaatgaat gattccctcc ctccaccaac ccacacacac 6121 acacatacac acgcatactg tgcaaagtat tttctatatt cattacatat aaatatatcc 6181 atatataact aaactaaatt tataaaatag tttttttttg tttttttttt ttacatcata 6241 tatatattta gccgcagctt ataaaataga tttaaaaata aaaaatgatt acaatttttt 6301 tgtatgaaat gcaaa