PREDICTED: Drosophila takahashii WNT inhibitory factor 1 (shf),

LOCUS       XM_017156718            1814 bp    mRNA    linear   INV 09-DEC-2024
            transcript variant X3, mRNA.
ACCESSION   XM_017156718
VERSION     XM_017156718.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017156718.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1814
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..1814
                     /gene="shf"
                     /note="WNT inhibitory factor 1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:108067595"
     CDS             288..1646
                     /gene="shf"
                     /codon_start=1
                     /product="protein shifted isoform X3"
                     /protein_id="XP_017012207.1"
                     /db_xref="GeneID:108067595"
                     /translation="MSHQGIGCLVKWFYLVLIVHTLLCIGQLECRQHQHNRNNNNNNS
                     NNNRRSDSSSSEESHGNASDGLDNYADHDIGGPGGPQPRRGQRKKHQGGGGGGGGGGG
                     GGGGGNGNGGGGGNRNNRNEESGISLWINEQQLKMLTALYFPQGYSERLYAIHNSRVT
                     NDLRDTTLYNFLVIPSEVNYVNFTWKSGRRKYFYDFDRLQTMDESILKAPTLSIRKSG
                     RIPQEQKNFSIFLPCTGNSSGTASFNVGLKIQTRHNKPLSGTPIRLNFKKECAHRAPD
                     PECSLKCGKNGYCNEQHICKCNVGYTGQYCETAFCFPQCLNGGNCTAPSICTCPEGYQ
                     GTQCEGGICKDKCLNGGKCIQKDKCQCSKGYYGLRCEYSKCVIPCKNEGRCIGNNLCR
                     CPNGLRGDHCEIGRKQRSICKCRNGTCTSHKHCKCHPGFYGRHCNGRKQRHVHRNDDS
                     KF"
     misc_feature    672..1088
                     /gene="shf"
                     /note="WIF domain; Region: WIF; cl02623"
                     /db_xref="CDD:470637"
     polyA_site      1814
                     /gene="shf"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 agctaaggag ctgcagcgcg acggtcgcac ccgaaactct gcgcgatatt gtattctcag
       61 aggccaattc tgttcgcgtt tgtgtccaaa caaaaaagct tcgacgctac ggaattcgtg
      121 aaaaatcgaa ggctcaagga attcggcaaa taaaagtgta tatatttttt gtggacttgt
      181 caaccatttt tgatttgtca accgagtcaa caacggccaa tccaaccgaa gcgactgttt
      241 attgcctttt tttttgggtc cggcgacggc caacgactgg ggaaactatg agccatcagg
      301 gcatcggctg cctggtcaag tggttctatc tggtgctgat cgtgcacacg ctcctctgca
      361 tcggccagct cgagtgtcgc cagcaccagc acaatcggaa caataacaat aacaatagca
      421 acaacaacag aagatcggac tcgtccagtt cggaggagag ccacggcaac gccagcgatg
      481 gcctggacaa ctatgcggac cacgacatcg gtggtcctgg tggtccccag ccgcgacggg
      541 gtcagcggaa gaaacaccag ggcggcggcg gaggaggagg aggaggaggc ggcggcggag
      601 gaggaggaaa cggaaacgga ggaggcggtg gcaaccggaa caaccgcaac gaggagagcg
      661 gcatctcgct gtggatcaac gagcagcagc tcaagatgct cactgcgctc tacttcccgc
      721 agggctactc ggaacgcctg tacgccatcc acaacagccg ggtgaccaac gatctgcgcg
      781 acaccacgct gtacaacttc ctggtgatcc cgtccgaggt gaactacgtg aacttcacgt
      841 ggaagtcggg gcggcgcaag tacttctacg acttcgatcg cctgcagacg atggacgaga
      901 gcatcctgaa ggcgcccacg ctgtccatcc gcaagagcgg ccgcattccg caggagcaga
      961 agaatttcag catcttcctg ccctgcaccg gcaacagctc cggcaccgcg tccttcaacg
     1021 tcggcctcaa gatccagacg cgccacaaca agccgctctc aggcacaccc attcgactca
     1081 acttcaaaaa ggaatgcgcc cacagagctc ccgatccaga atgcagcttg aagtgcggca
     1141 agaacggcta ctgcaacgag cagcacattt gcaagtgcaa cgtgggctac acgggccagt
     1201 actgcgagac ggccttctgc ttcccgcagt gcctcaacgg gggcaactgc acggcgccgt
     1261 cgatctgcac ctgtccggag ggctaccagg gcacccagtg cgaaggtggt atttgcaagg
     1321 acaagtgcct gaatggcggc aagtgcatac agaaggacaa gtgccagtgc tccaagggat
     1381 actacggcct gcgctgcgag tactccaagt gcgtgattcc ctgcaagaac gagggtcgct
     1441 gcatcgggaa caacctgtgc cgctgcccca atggattgcg gggcgatcac tgcgagatcg
     1501 gacgcaagca gcgctccatt tgcaagtgcc gcaatggcac ctgcacctcc cacaagcact
     1561 gcaagtgcca tccgggattc tatgggcgcc actgcaacgg ccgcaagcag cgacatgtcc
     1621 accgaaacga cgactccaag ttctaggatc catcgtaata tccattcaac tttacacact
     1681 tttctattaa aaagcacaac gactacaaca acaacagcga caaaaggatg aaacgaaaat
     1741 aattctaatt gtgataaaat ttttttgtaa tttaacataa caattttaaa taaaacacga
     1801 aatctaagag ttga