PREDICTED: Drosophila takahashii WNT inhibitory factor 1 (shf),

LOCUS       XM_017156703            1865 bp    mRNA    linear   INV 09-DEC-2024
            transcript variant X1, mRNA.
ACCESSION   XM_017156703
VERSION     XM_017156703.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017156703.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1865
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..1865
                     /gene="shf"
                     /note="WNT inhibitory factor 1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:108067595"
     CDS             288..1697
                     /gene="shf"
                     /codon_start=1
                     /product="protein shifted isoform X1"
                     /protein_id="XP_017012192.1"
                     /db_xref="GeneID:108067595"
                     /translation="MSHQGIGCLVKWFYLVLIVHTLLCIGQLECRQHQHNRNNNNNNS
                     NNNRRSDSSSSEESHGNASDGLDNYADHDIGGPGGPQPRRGQRKKHQGGGGGGGGGGG
                     GGGGGNGNGGGGGNRNNRNEESGISLWINEQQLKMLTALYFPQGYSERLYAIHNSRVT
                     NDLRDTTLYNFLVIPSEVNYVNFTWKSGRRKYFYDFDRLQTMDESILKAPTLSIRKSG
                     RIPQEQKNFSIFLPCTGNSSGTASFNVGLKIQTRHNKPLSGTPIRLNFKKECAHRGVY
                     DIDASNPTSLTTLQAPDPECSLKCGKNGYCNEQHICKCNVGYTGQYCETAFCFPQCLN
                     GGNCTAPSICTCPEGYQGTQCEGGICKDKCLNGGKCIQKDKCQCSKGYYGLRCEYSKC
                     VIPCKNEGRCIGNNLCRCPNGLRGDHCEIGRKQRSICKCRNGTCTSHKHCKCHPGFYG
                     RHCNGRKQRHVHRNDDSKF"
     misc_feature    672..1088
                     /gene="shf"
                     /note="WIF domain; Region: WIF; cl02623"
                     /db_xref="CDD:470637"
     polyA_site      1865
                     /gene="shf"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 agctaaggag ctgcagcgcg acggtcgcac ccgaaactct gcgcgatatt gtattctcag
       61 aggccaattc tgttcgcgtt tgtgtccaaa caaaaaagct tcgacgctac ggaattcgtg
      121 aaaaatcgaa ggctcaagga attcggcaaa taaaagtgta tatatttttt gtggacttgt
      181 caaccatttt tgatttgtca accgagtcaa caacggccaa tccaaccgaa gcgactgttt
      241 attgcctttt tttttgggtc cggcgacggc caacgactgg ggaaactatg agccatcagg
      301 gcatcggctg cctggtcaag tggttctatc tggtgctgat cgtgcacacg ctcctctgca
      361 tcggccagct cgagtgtcgc cagcaccagc acaatcggaa caataacaat aacaatagca
      421 acaacaacag aagatcggac tcgtccagtt cggaggagag ccacggcaac gccagcgatg
      481 gcctggacaa ctatgcggac cacgacatcg gtggtcctgg tggtccccag ccgcgacggg
      541 gtcagcggaa gaaacaccag ggcggcggcg gaggaggagg aggaggaggc ggcggcggag
      601 gaggaggaaa cggaaacgga ggaggcggtg gcaaccggaa caaccgcaac gaggagagcg
      661 gcatctcgct gtggatcaac gagcagcagc tcaagatgct cactgcgctc tacttcccgc
      721 agggctactc ggaacgcctg tacgccatcc acaacagccg ggtgaccaac gatctgcgcg
      781 acaccacgct gtacaacttc ctggtgatcc cgtccgaggt gaactacgtg aacttcacgt
      841 ggaagtcggg gcggcgcaag tacttctacg acttcgatcg cctgcagacg atggacgaga
      901 gcatcctgaa ggcgcccacg ctgtccatcc gcaagagcgg ccgcattccg caggagcaga
      961 agaatttcag catcttcctg ccctgcaccg gcaacagctc cggcaccgcg tccttcaacg
     1021 tcggcctcaa gatccagacg cgccacaaca agccgctctc aggcacaccc attcgactca
     1081 acttcaaaaa ggaatgcgcc cacagaggtg tgtatgatat agacgcttcc aaccctactt
     1141 cactaacaac tttgcaagct cccgatccag aatgcagctt gaagtgcggc aagaacggct
     1201 actgcaacga gcagcacatt tgcaagtgca acgtgggcta cacgggccag tactgcgaga
     1261 cggccttctg cttcccgcag tgcctcaacg ggggcaactg cacggcgccg tcgatctgca
     1321 cctgtccgga gggctaccag ggcacccagt gcgaaggtgg tatttgcaag gacaagtgcc
     1381 tgaatggcgg caagtgcata cagaaggaca agtgccagtg ctccaaggga tactacggcc
     1441 tgcgctgcga gtactccaag tgcgtgattc cctgcaagaa cgagggtcgc tgcatcggga
     1501 acaacctgtg ccgctgcccc aatggattgc ggggcgatca ctgcgagatc ggacgcaagc
     1561 agcgctccat ttgcaagtgc cgcaatggca cctgcacctc ccacaagcac tgcaagtgcc
     1621 atccgggatt ctatgggcgc cactgcaacg gccgcaagca gcgacatgtc caccgaaacg
     1681 acgactccaa gttctaggat ccatcgtaat atccattcaa ctttacacac ttttctatta
     1741 aaaagcacaa cgactacaac aacaacagcg acaaaaggat gaaacgaaaa taattctaat
     1801 tgtgataaaa tttttttgta atttaacata acaattttaa ataaaacacg aaatctaaga
     1861 gttga