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LOCUS XM_017156682 6251 bp mRNA linear INV 09-DEC-2024 factor (C3G), transcript variant X9, mRNA. ACCESSION XM_017156682 VERSION XM_017156682.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017156682.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6251 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..6251 /gene="C3G" /note="C3G guanyl-nucleotide exchange factor; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108067537" CDS 453..4727 /gene="C3G" /codon_start=1 /product="guanine nucleotide-releasing factor 2 isoform X9" /protein_id="XP_017012171.2" /db_xref="GeneID:108067537" /translation="MRVLNTELRLRFKNRKPRPFNRAASADDAMMDMGMGIANGMGAT TPSTPLTPLDQRLNGAISMHGSISSPSTPGTCSSGIGVGGGGCSSSSNNSINSGGYSA ACTPPPPTSHQQHQGTPGGSSRGGGSVAGSGGASGVPPPAPPSAGSSGHKNSLKGTKL ARRARSFKDDLIEKISLMRTTNNTLGRSHSPHSPRTKHGSKAPPTTEEVQRSTQTLET HVKDISNALKHFRDVILKKKLEVLPGNGTVILETIASMYSVIQTYTLNENSAIMSGAT QQVYQSLGKLIKLCDEVMLSEESGECASLSNENVREVIDLLEDAVRNLVTLAQGKLKE QDQCAFRYSGTGLGGIGAAAEIMGKVTASPGVMMGSHLPGGGGAGGGGGIMRVSAVSA VSAESAAIAQRTSLPDIALTPKDRDILEQHSVNPMRGSHSTESILRDTSPPPKPPLPN RASNPPPLPPKRRSQPGSQPLGTGMGLGMGLGSSSSTTSTANQSTNISINSDLDCSSN ISLLNYGVDRLSVRSRSPDENSQCSFDSALNHSRDEEDQQQQQNQQLQQRQFPKMPGM MDNNEEMDKLVSYSFVSMREFQSVQSSTKSSSSNSEIAIGSSISSSTIEYQSSSSSVV SHSQSRQISSSSSSCTTTTTSSTTTGYGSSSSEQLEQSAPALPPKSIQRSSLTRHEST GGGTAAGDELDEASSGWASQSEMPEMRQLSPHHQLGLMGHHPHAASQLQHHWPSKHRS LIEGSGSCGAFDQRHLVGDHLEQEPPPLPMKKKHILAYMEICSASTRSIEQHRHTMHA YNISRNISHSQTMNIMPMSKELSPELEIPPALPPKNYKQRMATSMGSSPSLQPIIVTT TPPPSPKPPLAENGSTTGRPDSRMATVCEELNDGMVGEEAMPVLDSNENVSDGQTFYC HSHQLPGELVVGEDGSGQPISTPQVLEEEEEPLQQQEEPATMAEESAVSAVDDPSEIL PAAKPEIAPAEDAEEEEEMLINMLEEVNITRYLILKKREEDGPEVKGGHIDALIVHAS RVQKVADNAFCEAFITTFRTFIQPIDVIEKLTHRYTYFFCQVQDNKQKAAKETFALLV RVVNDLTSTDLTSQLLSLLVEFVYQLVCSGQLYLAKLLRNKFVEKVTLYKEPKVYGFI GAELGGAGGGGAGAGIAGSGGSSAAGGGGGGGGGGGANQPSLLDLKSLEIAEQMTLLD AELFTKIEIPEVLLFAKDQCEEKSPNLNKFTEHFNKMSYWARSKILRLQDAKEREKHV NKFIKIMKHLRKMNNYNSYLALLSALDSGPIRRLEWQKGITEEVRSFCALIDSSSSFR AYRQALAETNPPCIPYIGLILQDLTFVHVGNQDYLSKGVINFSKRWQQYNIIDNMKRF KKCAYPFRRNERIIRFFDNFKDFMGEEEMWQISEKIKPRGRRPVNY" misc_feature 3489..3890 /gene="C3G" /note="Guanine nucleotide exchange factor for Ras-like GTPases; N-terminal motif; Region: RasGEFN; smart00229" /db_xref="CDD:214571" misc_feature order(3546..3548,3681..3683,3693..3698,3705..3707, 3714..3719,3816..3818,3825..3827) /gene="C3G" /note="GTPase interaction site [polypeptide binding]; other site" /db_xref="CDD:100121" misc_feature 4014..4685 /gene="C3G" /note="Guanine nucleotide exchange factor for Ras-like small GTPases. Small GTP-binding proteins of the Ras superfamily function as molecular switches in fundamental events such as signal transduction, cytoskeleton dynamics and intracellular trafficking; Region: RasGEF; cd00155" /db_xref="CDD:238087" misc_feature order(4113..4121,4143..4148,4152..4160,4164..4169, 4176..4181,4188..4190,4287..4289,4296..4301,4305..4313, 4317..4328,4332..4337,4389..4391,4404..4412,4419..4421, 4458..4466,4473..4481,4485..4493,4497..4508,4551..4553, 4563..4565,4665..4667,4674..4679) /gene="C3G" /note="Ras interaction site [polypeptide binding]; other site" /db_xref="CDD:238087" polyA_site 6251 /gene="C3G" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 agttgggtgg ctcagctcgg tcagtcagtc gcacgcgaaa ttttcacaac atcggtgtgt 61 ggctgcggaa acagaaatat caaatatcga gtcaagttgt acaaatgaaa agctcgtgat 121 tcgtgattcg ttattcgcat ttgccccaca cttgtgtgtg atatcatata ggggcgattc 181 ccgatccccg aaatcattga ttcattcagt ttttttttcg agtgcttgat tgtgcgatca 241 gatcagtgat cagtgatcga aaagcgatcg atgcgggcca caaattgagt tggagtcgtt 301 gatgcgtttg ctccaattcc cagttaaaca ataacaaaag gcccgcccag aaagatcccc 361 gatcccctct ttatagagga ggaggtgtgt gatagtgtgt gtttgtgtag catctatttc 421 catctatttc cgccgttttc ccggtcaaca aaatgcgagt tctcaacacg gagctgcgcc 481 tgcgcttcaa aaatcgcaaa ccgcgaccct ttaatcgtgc tgccagtgcc gatgatgcga 541 tgatggacat gggaatgggg attgcaaatg ggatgggggc tacaaccccc tcgaccccct 601 tgacgccact cgatcagcgc ctgaatggag ccatcagtat gcacggcagc atcagttctc 661 catccacgcc cggcacctgt tccagtggca tcggagtggg cggtggcggc tgcagcagca 721 gcagcaacaa cagcatcaac agcggcggct actccgccgc ctgcaccccg ccaccaccca 781 cgtcgcatca gcagcatcag ggaacgcccg gaggatctag tcggggagga ggatcggtag 841 cgggatcggg aggagcaagt ggagtgccac caccggcacc gcccagtgcg ggatcgtcgg 901 gccacaagaa cagcctaaag ggcaccaagc tagcgcgccg ggcgcgctcc ttcaaggacg 961 atctgatcga gaagatctcc ctgatgcgga ccaccaacaa caccctgggt cgctcccact 1021 cgccgcacag tccgcgcacc aagcacggat cgaaggcgcc gccgaccacc gaggaggtgc 1081 agcgctccac ccagacgctg gagacgcatg tcaaggacat ctcgaatgcg ctcaagcatt 1141 tccgggatgt aatactcaag aagaagctgg aggtgttgcc gggcaacggt acggtcatcc 1201 tggagaccat agccagcatg tactccgtta tccaaaccta tacactgaac gaaaacagtg 1261 ccatcatgag cggcgccacg cagcaggtct accagagcct gggcaagctc atcaagctct 1321 gcgacgaggt gatgctctcc gaggagagcg gcgagtgcgc ctccctgagc aacgagaatg 1381 tgcgggaggt gatcgatctg ctggaggatg cagtgaggaa tctcgttacg ctggcgcagg 1441 gaaagctgaa ggagcaggat cagtgcgcgt ttcgctacag cggcactggc ctgggcggca 1501 tcggagctgc ggccgagatc atgggcaagg tgacggcctc gccgggcgtc atgatgggta 1561 gtcatttgcc cggtggcggt ggtgccggtg gcggtggcgg gattatgcgc gtctcagccg 1621 tctcagccgt ctccgccgaa tcggcggcca tcgcacagcg cacctcgctg ccggacatcg 1681 cactcacgcc caaggaccgc gacatcctgg agcagcacag tgtgaatccc atgcgcggct 1741 cccacagcac cgaaagcatc ctgcgcgaca cgagtccacc gccgaagcca ccgctgccca 1801 accgggccag caatccgcca cctttgccgc ccaagcgacg cagtcagccg ggcagtcagc 1861 ccttgggcac gggcatgggt ttgggcatgg gactgggctc ctcctcgtcg accacctcca 1921 ccgccaatca gtcgacgaat atcagcatca actcggacct ggactgcagc tcaaacatct 1981 cgctgctgaa ctacggcgtg gatcgcctat cggtgcgttc gcggtcaccg gatgagaata 2041 gtcagtgctc ctttgactcg gcgttgaatc actcgcgcga tgaggaggac cagcagcagc 2101 agcagaatca gcagctgcag cagcggcagt ttccaaagat gcccggaatg atggacaaca 2161 acgaggagat ggacaagctg gtcagctaca gcttcgtttc gatgcgcgag ttccagagtg 2221 tgcagtcctc cacaaagtcc tccagcagca actcggagat tgcgataggg agcagcatta 2281 gcagcagcac catcgagtac cagtcgtcgt cgtcgtcggt ggtctcgcac agccagtcgc 2341 ggcagatctc gtcgagcagc agtagctgca ccaccaccac cacgagcagc accaccacgg 2401 gctatgggag cagcagcagc gagcagctgg agcaatcggc gcccgctttg ccgccgaaga 2461 gcatacagag gagcagcctg acccgccacg agtcgacggg cggtggaact gcagccggtg 2521 acgagctgga cgaggcctcc tccggatggg ccagccagtc ggagatgccc gagatgcggc 2581 agctgtcgcc gcaccatcag ctcggcctca tgggccatca tccgcatgcc gcatcccagc 2641 tgcagcacca ctggccctcg aagcatcgca gcctgatcga gggcagcggc agctgcggcg 2701 ccttcgacca gcgtcacctg gtcggtgacc acctggagca ggagccgccg ccgctgccga 2761 tgaagaagaa gcacattctg gcctacatgg agatctgctc ggcgtccacg cgatccattg 2821 agcagcaccg ccacacgatg cacgcctaca acattagtcg caacatctcg cacagccaga 2881 ccatgaacat catgcccatg agcaaggaac tctcgccgga gctcgagata ccgcctgcgc 2941 tgccgccaaa gaactacaag cagcgcatgg cgacaagcat gggttcgtcg ccctcgctgc 3001 agccgatcat agtgaccacc acgccgccgc cgagtccgaa gccgccgctg gccgagaacg 3061 gatcgacgac gggcaggccg gacagccgga tggccaccgt ctgcgaggag ctcaacgatg 3121 gaatggtcgg tgaggaggcg atgcccgtgc tggacagcaa tgagaacgtg agcgatggcc 3181 agaccttcta ttgccactcg catcagctgc ccggcgagtt ggtcgtgggc gaggacggct 3241 ctggacagcc gatcagcacg ccacaggtgc tcgaggagga ggaggagccg ctgcagcagc 3301 aggaggagcc agccacgatg gcagaggagt cagctgtctc ggccgtcgat gaccctagcg 3361 agattctgcc cgctgccaag ccagagattg cccccgccga ggatgccgag gaggaggagg 3421 agatgctgat caacatgctg gaggaggtca acatcacacg gtacctgata ctcaagaagc 3481 gggaggagga cgggcccgag gtgaagggcg gccacatcga cgcactcatc gtccacgcca 3541 gccgcgtcca gaaggtcgcc gacaatgcat tctgcgaggc cttcatcacc accttccgca 3601 ccttcatcca gccgatcgac gtgatcgaga agctgaccca tcgctacaca tacttcttct 3661 gtcaagtgca ggacaacaag cagaaggccg ccaaggagac ctttgcgctg ctggtccgag 3721 tcgtcaacga tctaacgtcg acggatctca ccagccagct gctgagcctg ctggtggagt 3781 ttgtctacca gttggtctgc tctggccagc tctacttggc caagttgctg cgcaacaagt 3841 tcgtggagaa ggtgacgctg tacaaggagc ccaaggtgta cggcttcatt ggggccgagt 3901 tgggtggagc cggcggtggt ggcgccggag cgggaatcgc cgggagcggt ggaagcagtg 3961 cggcaggagg gggaggagga ggaggaggtg gtggtggggc caaccagccc agcctgctcg 4021 acctcaagtc actggagatc gccgaacaga tgacgctgct ggacgccgag ctgttcacga 4081 agatcgagat accagaagta ttactatttg ccaaagatca gtgcgaggag aagtcgccca 4141 acctcaacaa gttcaccgag cacttcaaca agatgtccta ctgggcgcgc tccaagattc 4201 tgcgcctgca ggatgccaag gagcgggaga agcatgtgaa caagttcatc aagatcatga 4261 agcatctgcg caagatgaac aactacaact cgtatctggc gctgctgtct gccctcgatt 4321 cgggtcccat aaggagattg gagtggcaaa agggcatcac cgaggaggtg cgctccttct 4381 gcgccctcat cgattccagc tccagttttc gggcctatcg ccaggccctg gccgaaacta 4441 atccgccctg cataccctat atcggcctaa ttcttcagga tctgacgttt gtgcatgtgg 4501 gcaaccagga ttacttgtcc aagggcgtca ttaacttctc caagcgctgg cagcagtaca 4561 acataattga caacatgaaa cgttttaaga aatgtgccta tccatttcga cgcaacgagc 4621 gcatcatacg cttctttgat aacttcaagg actttatggg cgaggaggag atgtggcaga 4681 tatccgagaa gataaagccg cgcggccgcc gccccgttaa ctattagtct tcaagcagca 4741 agagcaaaac accaatatta tatattacaa gaagaaatat atacatatat atacaatatt 4801 aattaaacag tgcaaaacgg ttgccgcgtc ttggaggatg gagaagcatc gtcatcatca 4861 ggagcaggag cagccgacaa ctattctaat gggtctgagc aataacgttc gctattctct 4921 gtctacatat atacaattat acaagatatc tagctataga tcagaaatac atatacttac 4981 ataagatata gcgaagcaga tacggataca gatgcacgtg tagccgcgta caaataacaa 5041 ctaacaaata acgagccgat ctgtagttta actattaagc tctgtgacaa gctaacaact 5101 ccccaccaat aatcgagtcc ctatctatac ggctcccgga attttcatcg ggaaattcgc 5161 cagcactaga acaccaaact taagaaccac cagagatgaa caaccaatca agaaatcagc 5221 aattttcgct tttgttttga gatctctttt tacacaagaa cacaacgaat ttttggaaac 5281 aagctacgtg tgaacgtaga ggccaaccga caaactgaca aactatattc gacgatatat 5341 atagagcgat atctcggact atgaatcgat gcaatccacg agcagaacac caagcaacca 5401 agcacacagc gcgtattatg caattctctt aaaacaccca aaatatagaa taccctatcc 5461 ttgtgtgtta gaagttattg aaaatcagaa atcagaaaaa tggataacag aagcggtgcc 5521 gatcaaatca atcaaaaaat tatttcgcga ctcaattaat cgaagaaact tttaaagtta 5581 caaaaaaaaa aaccaaacaa aaaaaaaaca aaacccatgg gagattacct aaattcaatt 5641 tgcttttaaa tgtacgacta acataaaaaa tatttatggg catgtaataa tagttctaaa 5701 tatagctttt gactcctcct ttcgatcctg caaggaataa atctattgat attgcgtgta 5761 aaaataatga acaagagaac aaatctggag cagagtcaaa actgaatgaa atcgaaatta 5821 aatcgacctc aagttagttg tttttactaa gcaaaatgca aaaagcaaaa ctctgtctcg 5881 tctgaaaact gaaaatattg tcttcttaat tagaaatggg aaaaagaaaa aaggctgctt 5941 atttgaagaa tttaattccc gatcaccata gccatcttac ttgaaagtaa ataaattcat 6001 ttgtgttgag tggattcggt cttctttttg ctgctgcttc cgctgccgct ggcgcataaa 6061 ttatttttac taagctaacg aacctaagga taacaattta ttcgtttttt tttctcctat 6121 ttttaaatta aatattttgt atatgtagag aaaattttca attgtaaatg tatgtatttg 6181 taactaaatg ttatgcgtgt attcgtaaga agaatgaaaa tagctaccac aatcaatgta 6241 tttttccttt a