Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_017156663 6398 bp mRNA linear INV 09-DEC-2024 factor (C3G), transcript variant X6, mRNA. ACCESSION XM_017156663 VERSION XM_017156663.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017156663.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6398 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..6398 /gene="C3G" /note="C3G guanyl-nucleotide exchange factor; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108067537" CDS 453..4874 /gene="C3G" /codon_start=1 /product="guanine nucleotide-releasing factor 2 isoform X6" /protein_id="XP_017012152.2" /db_xref="GeneID:108067537" /translation="MRVLNTELRLRFKNRKPRPFNRAASADDAMMDMGMGIANGMGAT TPSTPLTPLDQRLNGAISMHGSISSPSTPGTCSSGIGVGGGGCSSSSNNSINSGGYSA ACTPPPPTSHQQHQGTPGGSSRGGGSVAGSGGASGVPPPAPPSAGSSGHKNSLKGTKL ARRARSFKDDLIEKISLMRTTNNTLGRSHSPHSPRTKHGSKAPPTTEEVQRSTQTLET HVKDISNALKHFRDVILKKKLEVLPGNGTVILETIASMYSVIQTYTLNENSAIMSGAT QQVYQSLGKLIKLCDEVMLSEESGECASLSNENVREVIDLLEDAVRNLVTLAQGKLKE QDQCAFRYSGTGLGGIGAAAEIMGKVTASPGVMMGSHLPGGGGAGGGGGIMRVSAVSA VSAESAAIAQRTSLPDIALTPKDRDILEQHSVNPMRGSHSTESILRDTSPPPKPPLPN RASNPPPLPPKRRSQPGSQPLGTGMGLGMGLGSSSSTTSTANQSTNISINSDLDCSSN ISLLNYGVDRLSVRSRSPDENSQCSFDSALNHSRDEEDQQQQQNQQLQQRQFPKMPGM MDNNEEMDKLVSYSAAMETPLPLPIGGNGGVGNAAAPGGGGAAAAAATGGGETNSNRH SNESGFVSMREFQSVQSSTKSSSSNSEIAIGSSISSSTIEYQSSSSSVVSHSQSRQIS SSSSSCTTTTTSSTTTGYGSSSSEQLEQSAPALPPKSIQRSSLTRHESTGGGTAAGDE LDEASSGWASQSEMPEMRQLSPHHQLGLMGHHPHAASQLQHHWPSKHRSLIEGSGSCG AFDQRHLVGDHLEQEPPPLPMKKKHILAYMEICSASTRSIEQHRHTMHAYNISRNISH SQTMNIMPMSKELSPELEIPPALPPKNYKQRMATSMGSSPSLQPIIVTTTPPPSPKPP LAENGSTTGRPDSRMATVCEELNDGMVGEEAMPVLDSNENVSDGQTFYCHSHQLPGEL VVGEDGSGQPISTPQVLEEEEEPLQQQEEPATMAEESAVSAVDDPSEILPAAKPEIAP AEDAEEEEEMLINMLEEVNITRYLILKKREEDGPEVKGGHIDALIVHASRVQKVADNA FCEAFITTFRTFIQPIDVIEKLTHRYTYFFCQVQDNKQKAAKETFALLVRVVNDLTST DLTSQLLSLLVEFVYQLVCSGQLYLAKLLRNKFVEKVTLYKEPKVYGFIGAELGGAGG GGAGAGIAGSGGSSAAGGGGGGGGGGGANQPSLLDLKSLEIAEQMTLLDAELFTKIEI PEVLLFAKDQCEEKSPNLNKFTEHFNKMSYWARSKILRLQDAKEREKHVNKFIKIMKH LRKMNNYNSYLALLSALDSGPIRRLEWQKGITEEVRSFCALIDSSSSFRAYRQALAET NPPCIPYIGLILQDLTFVHVGNQDYLSKGVINFSKRWQQYNIIDNMKRFKKCAYPFRR NERIIRFFDNFKDFMGEEEMWQISEKIKPRGRRPVNY" misc_feature 3636..4037 /gene="C3G" /note="Guanine nucleotide exchange factor for Ras-like GTPases; N-terminal motif; Region: RasGEFN; smart00229" /db_xref="CDD:214571" misc_feature order(3693..3695,3828..3830,3840..3845,3852..3854, 3861..3866,3963..3965,3972..3974) /gene="C3G" /note="GTPase interaction site [polypeptide binding]; other site" /db_xref="CDD:100121" misc_feature 4161..4832 /gene="C3G" /note="Guanine nucleotide exchange factor for Ras-like small GTPases. Small GTP-binding proteins of the Ras superfamily function as molecular switches in fundamental events such as signal transduction, cytoskeleton dynamics and intracellular trafficking; Region: RasGEF; cd00155" /db_xref="CDD:238087" misc_feature order(4260..4268,4290..4295,4299..4307,4311..4316, 4323..4328,4335..4337,4434..4436,4443..4448,4452..4460, 4464..4475,4479..4484,4536..4538,4551..4559,4566..4568, 4605..4613,4620..4628,4632..4640,4644..4655,4698..4700, 4710..4712,4812..4814,4821..4826) /gene="C3G" /note="Ras interaction site [polypeptide binding]; other site" /db_xref="CDD:238087" polyA_site 6398 /gene="C3G" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 agttgggtgg ctcagctcgg tcagtcagtc gcacgcgaaa ttttcacaac atcggtgtgt 61 ggctgcggaa acagaaatat caaatatcga gtcaagttgt acaaatgaaa agctcgtgat 121 tcgtgattcg ttattcgcat ttgccccaca cttgtgtgtg atatcatata ggggcgattc 181 ccgatccccg aaatcattga ttcattcagt ttttttttcg agtgcttgat tgtgcgatca 241 gatcagtgat cagtgatcga aaagcgatcg atgcgggcca caaattgagt tggagtcgtt 301 gatgcgtttg ctccaattcc cagttaaaca ataacaaaag gcccgcccag aaagatcccc 361 gatcccctct ttatagagga ggaggtgtgt gatagtgtgt gtttgtgtag catctatttc 421 catctatttc cgccgttttc ccggtcaaca aaatgcgagt tctcaacacg gagctgcgcc 481 tgcgcttcaa aaatcgcaaa ccgcgaccct ttaatcgtgc tgccagtgcc gatgatgcga 541 tgatggacat gggaatgggg attgcaaatg ggatgggggc tacaaccccc tcgaccccct 601 tgacgccact cgatcagcgc ctgaatggag ccatcagtat gcacggcagc atcagttctc 661 catccacgcc cggcacctgt tccagtggca tcggagtggg cggtggcggc tgcagcagca 721 gcagcaacaa cagcatcaac agcggcggct actccgccgc ctgcaccccg ccaccaccca 781 cgtcgcatca gcagcatcag ggaacgcccg gaggatctag tcggggagga ggatcggtag 841 cgggatcggg aggagcaagt ggagtgccac caccggcacc gcccagtgcg ggatcgtcgg 901 gccacaagaa cagcctaaag ggcaccaagc tagcgcgccg ggcgcgctcc ttcaaggacg 961 atctgatcga gaagatctcc ctgatgcgga ccaccaacaa caccctgggt cgctcccact 1021 cgccgcacag tccgcgcacc aagcacggat cgaaggcgcc gccgaccacc gaggaggtgc 1081 agcgctccac ccagacgctg gagacgcatg tcaaggacat ctcgaatgcg ctcaagcatt 1141 tccgggatgt aatactcaag aagaagctgg aggtgttgcc gggcaacggt acggtcatcc 1201 tggagaccat agccagcatg tactccgtta tccaaaccta tacactgaac gaaaacagtg 1261 ccatcatgag cggcgccacg cagcaggtct accagagcct gggcaagctc atcaagctct 1321 gcgacgaggt gatgctctcc gaggagagcg gcgagtgcgc ctccctgagc aacgagaatg 1381 tgcgggaggt gatcgatctg ctggaggatg cagtgaggaa tctcgttacg ctggcgcagg 1441 gaaagctgaa ggagcaggat cagtgcgcgt ttcgctacag cggcactggc ctgggcggca 1501 tcggagctgc ggccgagatc atgggcaagg tgacggcctc gccgggcgtc atgatgggta 1561 gtcatttgcc cggtggcggt ggtgccggtg gcggtggcgg gattatgcgc gtctcagccg 1621 tctcagccgt ctccgccgaa tcggcggcca tcgcacagcg cacctcgctg ccggacatcg 1681 cactcacgcc caaggaccgc gacatcctgg agcagcacag tgtgaatccc atgcgcggct 1741 cccacagcac cgaaagcatc ctgcgcgaca cgagtccacc gccgaagcca ccgctgccca 1801 accgggccag caatccgcca cctttgccgc ccaagcgacg cagtcagccg ggcagtcagc 1861 ccttgggcac gggcatgggt ttgggcatgg gactgggctc ctcctcgtcg accacctcca 1921 ccgccaatca gtcgacgaat atcagcatca actcggacct ggactgcagc tcaaacatct 1981 cgctgctgaa ctacggcgtg gatcgcctat cggtgcgttc gcggtcaccg gatgagaata 2041 gtcagtgctc ctttgactcg gcgttgaatc actcgcgcga tgaggaggac cagcagcagc 2101 agcagaatca gcagctgcag cagcggcagt ttccaaagat gcccggaatg atggacaaca 2161 acgaggagat ggacaagctg gtcagctaca gcgccgccat ggagacaccg cttccgcttc 2221 cgatcggtgg taatggtggt gttgggaatg ctgctgcccc cggaggagga ggagcagctg 2281 ctgcagcggc gactggtggc ggggaaacta acagcaatcg ccactcaaac gaatcgggct 2341 tcgtttcgat gcgcgagttc cagagtgtgc agtcctccac aaagtcctcc agcagcaact 2401 cggagattgc gatagggagc agcattagca gcagcaccat cgagtaccag tcgtcgtcgt 2461 cgtcggtggt ctcgcacagc cagtcgcggc agatctcgtc gagcagcagt agctgcacca 2521 ccaccaccac gagcagcacc accacgggct atgggagcag cagcagcgag cagctggagc 2581 aatcggcgcc cgctttgccg ccgaagagca tacagaggag cagcctgacc cgccacgagt 2641 cgacgggcgg tggaactgca gccggtgacg agctggacga ggcctcctcc ggatgggcca 2701 gccagtcgga gatgcccgag atgcggcagc tgtcgccgca ccatcagctc ggcctcatgg 2761 gccatcatcc gcatgccgca tcccagctgc agcaccactg gccctcgaag catcgcagcc 2821 tgatcgaggg cagcggcagc tgcggcgcct tcgaccagcg tcacctggtc ggtgaccacc 2881 tggagcagga gccgccgccg ctgccgatga agaagaagca cattctggcc tacatggaga 2941 tctgctcggc gtccacgcga tccattgagc agcaccgcca cacgatgcac gcctacaaca 3001 ttagtcgcaa catctcgcac agccagacca tgaacatcat gcccatgagc aaggaactct 3061 cgccggagct cgagataccg cctgcgctgc cgccaaagaa ctacaagcag cgcatggcga 3121 caagcatggg ttcgtcgccc tcgctgcagc cgatcatagt gaccaccacg ccgccgccga 3181 gtccgaagcc gccgctggcc gagaacggat cgacgacggg caggccggac agccggatgg 3241 ccaccgtctg cgaggagctc aacgatggaa tggtcggtga ggaggcgatg cccgtgctgg 3301 acagcaatga gaacgtgagc gatggccaga ccttctattg ccactcgcat cagctgcccg 3361 gcgagttggt cgtgggcgag gacggctctg gacagccgat cagcacgcca caggtgctcg 3421 aggaggagga ggagccgctg cagcagcagg aggagccagc cacgatggca gaggagtcag 3481 ctgtctcggc cgtcgatgac cctagcgaga ttctgcccgc tgccaagcca gagattgccc 3541 ccgccgagga tgccgaggag gaggaggaga tgctgatcaa catgctggag gaggtcaaca 3601 tcacacggta cctgatactc aagaagcggg aggaggacgg gcccgaggtg aagggcggcc 3661 acatcgacgc actcatcgtc cacgccagcc gcgtccagaa ggtcgccgac aatgcattct 3721 gcgaggcctt catcaccacc ttccgcacct tcatccagcc gatcgacgtg atcgagaagc 3781 tgacccatcg ctacacatac ttcttctgtc aagtgcagga caacaagcag aaggccgcca 3841 aggagacctt tgcgctgctg gtccgagtcg tcaacgatct aacgtcgacg gatctcacca 3901 gccagctgct gagcctgctg gtggagtttg tctaccagtt ggtctgctct ggccagctct 3961 acttggccaa gttgctgcgc aacaagttcg tggagaaggt gacgctgtac aaggagccca 4021 aggtgtacgg cttcattggg gccgagttgg gtggagccgg cggtggtggc gccggagcgg 4081 gaatcgccgg gagcggtgga agcagtgcgg caggaggggg aggaggagga ggaggtggtg 4141 gtggggccaa ccagcccagc ctgctcgacc tcaagtcact ggagatcgcc gaacagatga 4201 cgctgctgga cgccgagctg ttcacgaaga tcgagatacc agaagtatta ctatttgcca 4261 aagatcagtg cgaggagaag tcgcccaacc tcaacaagtt caccgagcac ttcaacaaga 4321 tgtcctactg ggcgcgctcc aagattctgc gcctgcagga tgccaaggag cgggagaagc 4381 atgtgaacaa gttcatcaag atcatgaagc atctgcgcaa gatgaacaac tacaactcgt 4441 atctggcgct gctgtctgcc ctcgattcgg gtcccataag gagattggag tggcaaaagg 4501 gcatcaccga ggaggtgcgc tccttctgcg ccctcatcga ttccagctcc agttttcggg 4561 cctatcgcca ggccctggcc gaaactaatc cgccctgcat accctatatc ggcctaattc 4621 ttcaggatct gacgtttgtg catgtgggca accaggatta cttgtccaag ggcgtcatta 4681 acttctccaa gcgctggcag cagtacaaca taattgacaa catgaaacgt tttaagaaat 4741 gtgcctatcc atttcgacgc aacgagcgca tcatacgctt ctttgataac ttcaaggact 4801 ttatgggcga ggaggagatg tggcagatat ccgagaagat aaagccgcgc ggccgccgcc 4861 ccgttaacta ttagtcttca agcagcaaga gcaaaacacc aatattatat attacaagaa 4921 gaaatatata catatatata caatattaat taaacagtgc aaaacggttg ccgcgtcttg 4981 gaggatggag aagcatcgtc atcatcagga gcaggagcag ccgacaacta ttctaatggg 5041 tctgagcaat aacgttcgct attctctgtc tacatatata caattataca agatatctag 5101 ctatagatca gaaatacata tacttacata agatatagcg aagcagatac ggatacagat 5161 gcacgtgtag ccgcgtacaa ataacaacta acaaataacg agccgatctg tagtttaact 5221 attaagctct gtgacaagct aacaactccc caccaataat cgagtcccta tctatacggc 5281 tcccggaatt ttcatcggga aattcgccag cactagaaca ccaaacttaa gaaccaccag 5341 agatgaacaa ccaatcaaga aatcagcaat tttcgctttt gttttgagat ctctttttac 5401 acaagaacac aacgaatttt tggaaacaag ctacgtgtga acgtagaggc caaccgacaa 5461 actgacaaac tatattcgac gatatatata gagcgatatc tcggactatg aatcgatgca 5521 atccacgagc agaacaccaa gcaaccaagc acacagcgcg tattatgcaa ttctcttaaa 5581 acacccaaaa tatagaatac cctatccttg tgtgttagaa gttattgaaa atcagaaatc 5641 agaaaaatgg ataacagaag cggtgccgat caaatcaatc aaaaaattat ttcgcgactc 5701 aattaatcga agaaactttt aaagttacaa aaaaaaaaac caaacaaaaa aaaaacaaaa 5761 cccatgggag attacctaaa ttcaatttgc ttttaaatgt acgactaaca taaaaaatat 5821 ttatgggcat gtaataatag ttctaaatat agcttttgac tcctcctttc gatcctgcaa 5881 ggaataaatc tattgatatt gcgtgtaaaa ataatgaaca agagaacaaa tctggagcag 5941 agtcaaaact gaatgaaatc gaaattaaat cgacctcaag ttagttgttt ttactaagca 6001 aaatgcaaaa agcaaaactc tgtctcgtct gaaaactgaa aatattgtct tcttaattag 6061 aaatgggaaa aagaaaaaag gctgcttatt tgaagaattt aattcccgat caccatagcc 6121 atcttacttg aaagtaaata aattcatttg tgttgagtgg attcggtctt ctttttgctg 6181 ctgcttccgc tgccgctggc gcataaatta tttttactaa gctaacgaac ctaaggataa 6241 caatttattc gttttttttt ctcctatttt taaattaaat attttgtata tgtagagaaa 6301 attttcaatt gtaaatgtat gtatttgtaa ctaaatgtta tgcgtgtatt cgtaagaaga 6361 atgaaaatag ctaccacaat caatgtattt ttccttta