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LOCUS XM_017156648 6165 bp mRNA linear INV 09-DEC-2024 factor (C3G), transcript variant X4, mRNA. ACCESSION XM_017156648 VERSION XM_017156648.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017156648.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6165 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..6165 /gene="C3G" /note="C3G guanyl-nucleotide exchange factor; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108067537" CDS 94..4641 /gene="C3G" /codon_start=1 /product="guanine nucleotide-releasing factor 2 isoform X4" /protein_id="XP_017012137.2" /db_xref="GeneID:108067537" /translation="MPQFDESFLSDCALADRWHFYSYTVKQLPPKLNLNLSSNPNLTA NTNPSQDEHHHHRCLWKTHRQSWSPPDGNNNHSPSGNSNGNSNTCNISTGNTLHSIKF HRRRKYKKLARLALSTPAIPRQMDMDVVVDREFDMEMDADKDTPVPLKNAVCHGSISS PSTPGTCSSGIGVGGGGCSSSSNNSINSGGYSAACTPPPPTSHQQHQGTPGGSSRGGG SVAGSGGASGVPPPAPPSAGSSGHKNSLKGTKLARRARSFKDDLIEKISLMRTTNNTL GRSHSPHSPRTKHGSKAPPTTEEVQRSTQTLETHVKDISNALKHFRDVILKKKLEVLP GNGTVILETIASMYSVIQTYTLNENSAIMSGATQQVYQSLGKLIKLCDEVMLSEESGE CASLSNENVREVIDLLEDAVRNLVTLAQGKLKEQDQCAFRYSGTGLGGIGAAAEIMGK VTASPGVMMGSHLPGGGGAGGGGGIMRVSAVSAVSAESAAIAQRTSLPDIALTPKDRD ILEQHSVNPMRGSHSTESILRDTSPPPKPPLPNRASNPPPLPPKRRSQPGSQPLGTGM GLGMGLGSSSSTTSTANQSTNISINSDLDCSSNISLLNYGVDRLSVRSRSPDENSQCS FDSALNHSRDEEDQQQQQNQQLQQRQFPKMPGMMDNNEEMDKLVSYSFVSMREFQSVQ SSTKSSSSNSEIAIGSSISSSTIEYQSSSSSVVSHSQSRQISSSSSSCTTTTTSSTTT GYGSSSSEQLEQSAPALPPKSIQRSSLTRHESTGGGTAAGDELDEASSGWASQSEMPE MRQLSPHHQLGLMGHHPHAASQLQHHWPSKHRSLIEGSGSCGAFDQRHLVGDHLEQEP PPLPMKKKHILAYMEICSASTRSIEQHRHTMHAYNISRNISHSQTMNIMPMSKELSPE LEIPPALPPKNYKQRMATSMGSSPSLQPIIVTTTPPPSPKPPLAENGSTTGRPDSRMA TVCEELNDGMVGEEAMPVLDSNENVSDGQTFYCHSHQLPGELVVGEDGSGQPISTPQV LEEEEEPLQQQEEPATMAEESAVSAVDDPSEILPAAKPEIAPAEDAEEEEEMLINMLE EVNITRYLILKKREEDGPEVKGGHIDALIVHASRVQKVADNAFCEAFITTFRTFIQPI DVIEKLTHRYTYFFCQVQDNKQKAAKETFALLVRVVNDLTSTDLTSQLLSLLVEFVYQ LVCSGQLYLAKLLRNKFVEKVTLYKEPKVYGFIGAELGGAGGGGAGAGIAGSGGSSAA GGGGGGGGGGGANQPSLLDLKSLEIAEQMTLLDAELFTKIEIPEVLLFAKDQCEEKSP NLNKFTEHFNKMSYWARSKILRLQDAKEREKHVNKFIKIMKHLRKMNNYNSYLALLSA LDSGPIRRLEWQKGITEEVRSFCALIDSSSSFRAYRQALAETNPPCIPYIGLILQDLT FVHVGNQDYLSKGVINFSKRWQQYNIIDNMKRFKKCAYPFRRNERIIRFFDNFKDFMG EEEMWQISEKIKPRGRRPVNY" misc_feature 3403..3804 /gene="C3G" /note="Guanine nucleotide exchange factor for Ras-like GTPases; N-terminal motif; Region: RasGEFN; smart00229" /db_xref="CDD:214571" misc_feature order(3460..3462,3595..3597,3607..3612,3619..3621, 3628..3633,3730..3732,3739..3741) /gene="C3G" /note="GTPase interaction site [polypeptide binding]; other site" /db_xref="CDD:100121" misc_feature 3928..4599 /gene="C3G" /note="Guanine nucleotide exchange factor for Ras-like small GTPases. Small GTP-binding proteins of the Ras superfamily function as molecular switches in fundamental events such as signal transduction, cytoskeleton dynamics and intracellular trafficking; Region: RasGEF; cd00155" /db_xref="CDD:238087" misc_feature order(4027..4035,4057..4062,4066..4074,4078..4083, 4090..4095,4102..4104,4201..4203,4210..4215,4219..4227, 4231..4242,4246..4251,4303..4305,4318..4326,4333..4335, 4372..4380,4387..4395,4399..4407,4411..4422,4465..4467, 4477..4479,4579..4581,4588..4593) /gene="C3G" /note="Ras interaction site [polypeptide binding]; other site" /db_xref="CDD:238087" polyA_site 6165 /gene="C3G" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ctatcggcac attcgttttg gccaaacatt ttaaccacaa caaattgtta tgcgtgttgt 61 tgatgttgct gcattagctg gccattatgc aatatgccgc agtttgatga atcttttttg 121 agcgactgtg cgctggccga tcgctggcat ttctactcgt acacggtcaa gcaattgcca 181 ccgaaactga atctgaatct gagttcgaat ccaaatctaa ctgcaaatac aaatcccagc 241 caagatgaac atcatcacca tcgctgcctt tggaagacgc accggcaatc gtggtcaccg 301 cccgacggca acaataatca cagtccgagt ggcaacagca acggcaacag caacacctgc 361 aacatcagta ccggcaacac gttgcatagc atcaaattcc acagacgtcg caaatacaaa 421 aagctggcac gattggcgct atcaacgcca gcgattccac ggcagatgga tatggatgtg 481 gttgtggata gggagttcga tatggagatg gacgcagaca aagacacacc tgtgccgctc 541 aagaatgcgg tgtgccacgg cagcatcagt tctccatcca cgcccggcac ctgttccagt 601 ggcatcggag tgggcggtgg cggctgcagc agcagcagca acaacagcat caacagcggc 661 ggctactccg ccgcctgcac cccgccacca cccacgtcgc atcagcagca tcagggaacg 721 cccggaggat ctagtcgggg aggaggatcg gtagcgggat cgggaggagc aagtggagtg 781 ccaccaccgg caccgcccag tgcgggatcg tcgggccaca agaacagcct aaagggcacc 841 aagctagcgc gccgggcgcg ctccttcaag gacgatctga tcgagaagat ctccctgatg 901 cggaccacca acaacaccct gggtcgctcc cactcgccgc acagtccgcg caccaagcac 961 ggatcgaagg cgccgccgac caccgaggag gtgcagcgct ccacccagac gctggagacg 1021 catgtcaagg acatctcgaa tgcgctcaag catttccggg atgtaatact caagaagaag 1081 ctggaggtgt tgccgggcaa cggtacggtc atcctggaga ccatagccag catgtactcc 1141 gttatccaaa cctatacact gaacgaaaac agtgccatca tgagcggcgc cacgcagcag 1201 gtctaccaga gcctgggcaa gctcatcaag ctctgcgacg aggtgatgct ctccgaggag 1261 agcggcgagt gcgcctccct gagcaacgag aatgtgcggg aggtgatcga tctgctggag 1321 gatgcagtga ggaatctcgt tacgctggcg cagggaaagc tgaaggagca ggatcagtgc 1381 gcgtttcgct acagcggcac tggcctgggc ggcatcggag ctgcggccga gatcatgggc 1441 aaggtgacgg cctcgccggg cgtcatgatg ggtagtcatt tgcccggtgg cggtggtgcc 1501 ggtggcggtg gcgggattat gcgcgtctca gccgtctcag ccgtctccgc cgaatcggcg 1561 gccatcgcac agcgcacctc gctgccggac atcgcactca cgcccaagga ccgcgacatc 1621 ctggagcagc acagtgtgaa tcccatgcgc ggctcccaca gcaccgaaag catcctgcgc 1681 gacacgagtc caccgccgaa gccaccgctg cccaaccggg ccagcaatcc gccacctttg 1741 ccgcccaagc gacgcagtca gccgggcagt cagcccttgg gcacgggcat gggtttgggc 1801 atgggactgg gctcctcctc gtcgaccacc tccaccgcca atcagtcgac gaatatcagc 1861 atcaactcgg acctggactg cagctcaaac atctcgctgc tgaactacgg cgtggatcgc 1921 ctatcggtgc gttcgcggtc accggatgag aatagtcagt gctcctttga ctcggcgttg 1981 aatcactcgc gcgatgagga ggaccagcag cagcagcaga atcagcagct gcagcagcgg 2041 cagtttccaa agatgcccgg aatgatggac aacaacgagg agatggacaa gctggtcagc 2101 tacagcttcg tttcgatgcg cgagttccag agtgtgcagt cctccacaaa gtcctccagc 2161 agcaactcgg agattgcgat agggagcagc attagcagca gcaccatcga gtaccagtcg 2221 tcgtcgtcgt cggtggtctc gcacagccag tcgcggcaga tctcgtcgag cagcagtagc 2281 tgcaccacca ccaccacgag cagcaccacc acgggctatg ggagcagcag cagcgagcag 2341 ctggagcaat cggcgcccgc tttgccgccg aagagcatac agaggagcag cctgacccgc 2401 cacgagtcga cgggcggtgg aactgcagcc ggtgacgagc tggacgaggc ctcctccgga 2461 tgggccagcc agtcggagat gcccgagatg cggcagctgt cgccgcacca tcagctcggc 2521 ctcatgggcc atcatccgca tgccgcatcc cagctgcagc accactggcc ctcgaagcat 2581 cgcagcctga tcgagggcag cggcagctgc ggcgccttcg accagcgtca cctggtcggt 2641 gaccacctgg agcaggagcc gccgccgctg ccgatgaaga agaagcacat tctggcctac 2701 atggagatct gctcggcgtc cacgcgatcc attgagcagc accgccacac gatgcacgcc 2761 tacaacatta gtcgcaacat ctcgcacagc cagaccatga acatcatgcc catgagcaag 2821 gaactctcgc cggagctcga gataccgcct gcgctgccgc caaagaacta caagcagcgc 2881 atggcgacaa gcatgggttc gtcgccctcg ctgcagccga tcatagtgac caccacgccg 2941 ccgccgagtc cgaagccgcc gctggccgag aacggatcga cgacgggcag gccggacagc 3001 cggatggcca ccgtctgcga ggagctcaac gatggaatgg tcggtgagga ggcgatgccc 3061 gtgctggaca gcaatgagaa cgtgagcgat ggccagacct tctattgcca ctcgcatcag 3121 ctgcccggcg agttggtcgt gggcgaggac ggctctggac agccgatcag cacgccacag 3181 gtgctcgagg aggaggagga gccgctgcag cagcaggagg agccagccac gatggcagag 3241 gagtcagctg tctcggccgt cgatgaccct agcgagattc tgcccgctgc caagccagag 3301 attgcccccg ccgaggatgc cgaggaggag gaggagatgc tgatcaacat gctggaggag 3361 gtcaacatca cacggtacct gatactcaag aagcgggagg aggacgggcc cgaggtgaag 3421 ggcggccaca tcgacgcact catcgtccac gccagccgcg tccagaaggt cgccgacaat 3481 gcattctgcg aggccttcat caccaccttc cgcaccttca tccagccgat cgacgtgatc 3541 gagaagctga cccatcgcta cacatacttc ttctgtcaag tgcaggacaa caagcagaag 3601 gccgccaagg agacctttgc gctgctggtc cgagtcgtca acgatctaac gtcgacggat 3661 ctcaccagcc agctgctgag cctgctggtg gagtttgtct accagttggt ctgctctggc 3721 cagctctact tggccaagtt gctgcgcaac aagttcgtgg agaaggtgac gctgtacaag 3781 gagcccaagg tgtacggctt cattggggcc gagttgggtg gagccggcgg tggtggcgcc 3841 ggagcgggaa tcgccgggag cggtggaagc agtgcggcag gagggggagg aggaggagga 3901 ggtggtggtg gggccaacca gcccagcctg ctcgacctca agtcactgga gatcgccgaa 3961 cagatgacgc tgctggacgc cgagctgttc acgaagatcg agataccaga agtattacta 4021 tttgccaaag atcagtgcga ggagaagtcg cccaacctca acaagttcac cgagcacttc 4081 aacaagatgt cctactgggc gcgctccaag attctgcgcc tgcaggatgc caaggagcgg 4141 gagaagcatg tgaacaagtt catcaagatc atgaagcatc tgcgcaagat gaacaactac 4201 aactcgtatc tggcgctgct gtctgccctc gattcgggtc ccataaggag attggagtgg 4261 caaaagggca tcaccgagga ggtgcgctcc ttctgcgccc tcatcgattc cagctccagt 4321 tttcgggcct atcgccaggc cctggccgaa actaatccgc cctgcatacc ctatatcggc 4381 ctaattcttc aggatctgac gtttgtgcat gtgggcaacc aggattactt gtccaagggc 4441 gtcattaact tctccaagcg ctggcagcag tacaacataa ttgacaacat gaaacgtttt 4501 aagaaatgtg cctatccatt tcgacgcaac gagcgcatca tacgcttctt tgataacttc 4561 aaggacttta tgggcgagga ggagatgtgg cagatatccg agaagataaa gccgcgcggc 4621 cgccgccccg ttaactatta gtcttcaagc agcaagagca aaacaccaat attatatatt 4681 acaagaagaa atatatacat atatatacaa tattaattaa acagtgcaaa acggttgccg 4741 cgtcttggag gatggagaag catcgtcatc atcaggagca ggagcagccg acaactattc 4801 taatgggtct gagcaataac gttcgctatt ctctgtctac atatatacaa ttatacaaga 4861 tatctagcta tagatcagaa atacatatac ttacataaga tatagcgaag cagatacgga 4921 tacagatgca cgtgtagccg cgtacaaata acaactaaca aataacgagc cgatctgtag 4981 tttaactatt aagctctgtg acaagctaac aactccccac caataatcga gtccctatct 5041 atacggctcc cggaattttc atcgggaaat tcgccagcac tagaacacca aacttaagaa 5101 ccaccagaga tgaacaacca atcaagaaat cagcaatttt cgcttttgtt ttgagatctc 5161 tttttacaca agaacacaac gaatttttgg aaacaagcta cgtgtgaacg tagaggccaa 5221 ccgacaaact gacaaactat attcgacgat atatatagag cgatatctcg gactatgaat 5281 cgatgcaatc cacgagcaga acaccaagca accaagcaca cagcgcgtat tatgcaattc 5341 tcttaaaaca cccaaaatat agaataccct atccttgtgt gttagaagtt attgaaaatc 5401 agaaatcaga aaaatggata acagaagcgg tgccgatcaa atcaatcaaa aaattatttc 5461 gcgactcaat taatcgaaga aacttttaaa gttacaaaaa aaaaaaccaa acaaaaaaaa 5521 aacaaaaccc atgggagatt acctaaattc aatttgcttt taaatgtacg actaacataa 5581 aaaatattta tgggcatgta ataatagttc taaatatagc ttttgactcc tcctttcgat 5641 cctgcaagga ataaatctat tgatattgcg tgtaaaaata atgaacaaga gaacaaatct 5701 ggagcagagt caaaactgaa tgaaatcgaa attaaatcga cctcaagtta gttgttttta 5761 ctaagcaaaa tgcaaaaagc aaaactctgt ctcgtctgaa aactgaaaat attgtcttct 5821 taattagaaa tgggaaaaag aaaaaaggct gcttatttga agaatttaat tcccgatcac 5881 catagccatc ttacttgaaa gtaaataaat tcatttgtgt tgagtggatt cggtcttctt 5941 tttgctgctg cttccgctgc cgctggcgca taaattattt ttactaagct aacgaaccta 6001 aggataacaa tttattcgtt tttttttctc ctatttttaa attaaatatt ttgtatatgt 6061 agagaaaatt ttcaattgta aatgtatgta tttgtaacta aatgttatgc gtgtattcgt 6121 aagaagaatg aaaatagcta ccacaatcaa tgtatttttc cttta