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LOCUS XM_017156624 6312 bp mRNA linear INV 09-DEC-2024 factor (C3G), transcript variant X2, mRNA. ACCESSION XM_017156624 VERSION XM_017156624.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017156624.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6312 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..6312 /gene="C3G" /note="C3G guanyl-nucleotide exchange factor; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108067537" CDS 94..4788 /gene="C3G" /codon_start=1 /product="guanine nucleotide-releasing factor 2 isoform X2" /protein_id="XP_017012113.2" /db_xref="GeneID:108067537" /translation="MPQFDESFLSDCALADRWHFYSYTVKQLPPKLNLNLSSNPNLTA NTNPSQDEHHHHRCLWKTHRQSWSPPDGNNNHSPSGNSNGNSNTCNISTGNTLHSIKF HRRRKYKKLARLALSTPAIPRQMDMDVVVDREFDMEMDADKDTPVPLKNAVCHGSISS PSTPGTCSSGIGVGGGGCSSSSNNSINSGGYSAACTPPPPTSHQQHQGTPGGSSRGGG SVAGSGGASGVPPPAPPSAGSSGHKNSLKGTKLARRARSFKDDLIEKISLMRTTNNTL GRSHSPHSPRTKHGSKAPPTTEEVQRSTQTLETHVKDISNALKHFRDVILKKKLEVLP GNGTVILETIASMYSVIQTYTLNENSAIMSGATQQVYQSLGKLIKLCDEVMLSEESGE CASLSNENVREVIDLLEDAVRNLVTLAQGKLKEQDQCAFRYSGTGLGGIGAAAEIMGK VTASPGVMMGSHLPGGGGAGGGGGIMRVSAVSAVSAESAAIAQRTSLPDIALTPKDRD ILEQHSVNPMRGSHSTESILRDTSPPPKPPLPNRASNPPPLPPKRRSQPGSQPLGTGM GLGMGLGSSSSTTSTANQSTNISINSDLDCSSNISLLNYGVDRLSVRSRSPDENSQCS FDSALNHSRDEEDQQQQQNQQLQQRQFPKMPGMMDNNEEMDKLVSYSAAMETPLPLPI GGNGGVGNAAAPGGGGAAAAAATGGGETNSNRHSNESGFVSMREFQSVQSSTKSSSSN SEIAIGSSISSSTIEYQSSSSSVVSHSQSRQISSSSSSCTTTTTSSTTTGYGSSSSEQ LEQSAPALPPKSIQRSSLTRHESTGGGTAAGDELDEASSGWASQSEMPEMRQLSPHHQ LGLMGHHPHAASQLQHHWPSKHRSLIEGSGSCGAFDQRHLVGDHLEQEPPPLPMKKKH ILAYMEICSASTRSIEQHRHTMHAYNISRNISHSQTMNIMPMSKELSPELEIPPALPP KNYKQRMATSMGSSPSLQPIIVTTTPPPSPKPPLAENGSTTGRPDSRMATVCEELNDG MVGEEAMPVLDSNENVSDGQTFYCHSHQLPGELVVGEDGSGQPISTPQVLEEEEEPLQ QQEEPATMAEESAVSAVDDPSEILPAAKPEIAPAEDAEEEEEMLINMLEEVNITRYLI LKKREEDGPEVKGGHIDALIVHASRVQKVADNAFCEAFITTFRTFIQPIDVIEKLTHR YTYFFCQVQDNKQKAAKETFALLVRVVNDLTSTDLTSQLLSLLVEFVYQLVCSGQLYL AKLLRNKFVEKVTLYKEPKVYGFIGAELGGAGGGGAGAGIAGSGGSSAAGGGGGGGGG GGANQPSLLDLKSLEIAEQMTLLDAELFTKIEIPEVLLFAKDQCEEKSPNLNKFTEHF NKMSYWARSKILRLQDAKEREKHVNKFIKIMKHLRKMNNYNSYLALLSALDSGPIRRL EWQKGITEEVRSFCALIDSSSSFRAYRQALAETNPPCIPYIGLILQDLTFVHVGNQDY LSKGVINFSKRWQQYNIIDNMKRFKKCAYPFRRNERIIRFFDNFKDFMGEEEMWQISE KIKPRGRRPVNY" misc_feature 3550..3951 /gene="C3G" /note="Guanine nucleotide exchange factor for Ras-like GTPases; N-terminal motif; Region: RasGEFN; smart00229" /db_xref="CDD:214571" misc_feature order(3607..3609,3742..3744,3754..3759,3766..3768, 3775..3780,3877..3879,3886..3888) /gene="C3G" /note="GTPase interaction site [polypeptide binding]; other site" /db_xref="CDD:100121" misc_feature 4075..4746 /gene="C3G" /note="Guanine nucleotide exchange factor for Ras-like small GTPases. Small GTP-binding proteins of the Ras superfamily function as molecular switches in fundamental events such as signal transduction, cytoskeleton dynamics and intracellular trafficking; Region: RasGEF; cd00155" /db_xref="CDD:238087" misc_feature order(4174..4182,4204..4209,4213..4221,4225..4230, 4237..4242,4249..4251,4348..4350,4357..4362,4366..4374, 4378..4389,4393..4398,4450..4452,4465..4473,4480..4482, 4519..4527,4534..4542,4546..4554,4558..4569,4612..4614, 4624..4626,4726..4728,4735..4740) /gene="C3G" /note="Ras interaction site [polypeptide binding]; other site" /db_xref="CDD:238087" polyA_site 6312 /gene="C3G" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ctatcggcac attcgttttg gccaaacatt ttaaccacaa caaattgtta tgcgtgttgt 61 tgatgttgct gcattagctg gccattatgc aatatgccgc agtttgatga atcttttttg 121 agcgactgtg cgctggccga tcgctggcat ttctactcgt acacggtcaa gcaattgcca 181 ccgaaactga atctgaatct gagttcgaat ccaaatctaa ctgcaaatac aaatcccagc 241 caagatgaac atcatcacca tcgctgcctt tggaagacgc accggcaatc gtggtcaccg 301 cccgacggca acaataatca cagtccgagt ggcaacagca acggcaacag caacacctgc 361 aacatcagta ccggcaacac gttgcatagc atcaaattcc acagacgtcg caaatacaaa 421 aagctggcac gattggcgct atcaacgcca gcgattccac ggcagatgga tatggatgtg 481 gttgtggata gggagttcga tatggagatg gacgcagaca aagacacacc tgtgccgctc 541 aagaatgcgg tgtgccacgg cagcatcagt tctccatcca cgcccggcac ctgttccagt 601 ggcatcggag tgggcggtgg cggctgcagc agcagcagca acaacagcat caacagcggc 661 ggctactccg ccgcctgcac cccgccacca cccacgtcgc atcagcagca tcagggaacg 721 cccggaggat ctagtcgggg aggaggatcg gtagcgggat cgggaggagc aagtggagtg 781 ccaccaccgg caccgcccag tgcgggatcg tcgggccaca agaacagcct aaagggcacc 841 aagctagcgc gccgggcgcg ctccttcaag gacgatctga tcgagaagat ctccctgatg 901 cggaccacca acaacaccct gggtcgctcc cactcgccgc acagtccgcg caccaagcac 961 ggatcgaagg cgccgccgac caccgaggag gtgcagcgct ccacccagac gctggagacg 1021 catgtcaagg acatctcgaa tgcgctcaag catttccggg atgtaatact caagaagaag 1081 ctggaggtgt tgccgggcaa cggtacggtc atcctggaga ccatagccag catgtactcc 1141 gttatccaaa cctatacact gaacgaaaac agtgccatca tgagcggcgc cacgcagcag 1201 gtctaccaga gcctgggcaa gctcatcaag ctctgcgacg aggtgatgct ctccgaggag 1261 agcggcgagt gcgcctccct gagcaacgag aatgtgcggg aggtgatcga tctgctggag 1321 gatgcagtga ggaatctcgt tacgctggcg cagggaaagc tgaaggagca ggatcagtgc 1381 gcgtttcgct acagcggcac tggcctgggc ggcatcggag ctgcggccga gatcatgggc 1441 aaggtgacgg cctcgccggg cgtcatgatg ggtagtcatt tgcccggtgg cggtggtgcc 1501 ggtggcggtg gcgggattat gcgcgtctca gccgtctcag ccgtctccgc cgaatcggcg 1561 gccatcgcac agcgcacctc gctgccggac atcgcactca cgcccaagga ccgcgacatc 1621 ctggagcagc acagtgtgaa tcccatgcgc ggctcccaca gcaccgaaag catcctgcgc 1681 gacacgagtc caccgccgaa gccaccgctg cccaaccggg ccagcaatcc gccacctttg 1741 ccgcccaagc gacgcagtca gccgggcagt cagcccttgg gcacgggcat gggtttgggc 1801 atgggactgg gctcctcctc gtcgaccacc tccaccgcca atcagtcgac gaatatcagc 1861 atcaactcgg acctggactg cagctcaaac atctcgctgc tgaactacgg cgtggatcgc 1921 ctatcggtgc gttcgcggtc accggatgag aatagtcagt gctcctttga ctcggcgttg 1981 aatcactcgc gcgatgagga ggaccagcag cagcagcaga atcagcagct gcagcagcgg 2041 cagtttccaa agatgcccgg aatgatggac aacaacgagg agatggacaa gctggtcagc 2101 tacagcgccg ccatggagac accgcttccg cttccgatcg gtggtaatgg tggtgttggg 2161 aatgctgctg cccccggagg aggaggagca gctgctgcag cggcgactgg tggcggggaa 2221 actaacagca atcgccactc aaacgaatcg ggcttcgttt cgatgcgcga gttccagagt 2281 gtgcagtcct ccacaaagtc ctccagcagc aactcggaga ttgcgatagg gagcagcatt 2341 agcagcagca ccatcgagta ccagtcgtcg tcgtcgtcgg tggtctcgca cagccagtcg 2401 cggcagatct cgtcgagcag cagtagctgc accaccacca ccacgagcag caccaccacg 2461 ggctatggga gcagcagcag cgagcagctg gagcaatcgg cgcccgcttt gccgccgaag 2521 agcatacaga ggagcagcct gacccgccac gagtcgacgg gcggtggaac tgcagccggt 2581 gacgagctgg acgaggcctc ctccggatgg gccagccagt cggagatgcc cgagatgcgg 2641 cagctgtcgc cgcaccatca gctcggcctc atgggccatc atccgcatgc cgcatcccag 2701 ctgcagcacc actggccctc gaagcatcgc agcctgatcg agggcagcgg cagctgcggc 2761 gccttcgacc agcgtcacct ggtcggtgac cacctggagc aggagccgcc gccgctgccg 2821 atgaagaaga agcacattct ggcctacatg gagatctgct cggcgtccac gcgatccatt 2881 gagcagcacc gccacacgat gcacgcctac aacattagtc gcaacatctc gcacagccag 2941 accatgaaca tcatgcccat gagcaaggaa ctctcgccgg agctcgagat accgcctgcg 3001 ctgccgccaa agaactacaa gcagcgcatg gcgacaagca tgggttcgtc gccctcgctg 3061 cagccgatca tagtgaccac cacgccgccg ccgagtccga agccgccgct ggccgagaac 3121 ggatcgacga cgggcaggcc ggacagccgg atggccaccg tctgcgagga gctcaacgat 3181 ggaatggtcg gtgaggaggc gatgcccgtg ctggacagca atgagaacgt gagcgatggc 3241 cagaccttct attgccactc gcatcagctg cccggcgagt tggtcgtggg cgaggacggc 3301 tctggacagc cgatcagcac gccacaggtg ctcgaggagg aggaggagcc gctgcagcag 3361 caggaggagc cagccacgat ggcagaggag tcagctgtct cggccgtcga tgaccctagc 3421 gagattctgc ccgctgccaa gccagagatt gcccccgccg aggatgccga ggaggaggag 3481 gagatgctga tcaacatgct ggaggaggtc aacatcacac ggtacctgat actcaagaag 3541 cgggaggagg acgggcccga ggtgaagggc ggccacatcg acgcactcat cgtccacgcc 3601 agccgcgtcc agaaggtcgc cgacaatgca ttctgcgagg ccttcatcac caccttccgc 3661 accttcatcc agccgatcga cgtgatcgag aagctgaccc atcgctacac atacttcttc 3721 tgtcaagtgc aggacaacaa gcagaaggcc gccaaggaga cctttgcgct gctggtccga 3781 gtcgtcaacg atctaacgtc gacggatctc accagccagc tgctgagcct gctggtggag 3841 tttgtctacc agttggtctg ctctggccag ctctacttgg ccaagttgct gcgcaacaag 3901 ttcgtggaga aggtgacgct gtacaaggag cccaaggtgt acggcttcat tggggccgag 3961 ttgggtggag ccggcggtgg tggcgccgga gcgggaatcg ccgggagcgg tggaagcagt 4021 gcggcaggag ggggaggagg aggaggaggt ggtggtgggg ccaaccagcc cagcctgctc 4081 gacctcaagt cactggagat cgccgaacag atgacgctgc tggacgccga gctgttcacg 4141 aagatcgaga taccagaagt attactattt gccaaagatc agtgcgagga gaagtcgccc 4201 aacctcaaca agttcaccga gcacttcaac aagatgtcct actgggcgcg ctccaagatt 4261 ctgcgcctgc aggatgccaa ggagcgggag aagcatgtga acaagttcat caagatcatg 4321 aagcatctgc gcaagatgaa caactacaac tcgtatctgg cgctgctgtc tgccctcgat 4381 tcgggtccca taaggagatt ggagtggcaa aagggcatca ccgaggaggt gcgctccttc 4441 tgcgccctca tcgattccag ctccagtttt cgggcctatc gccaggccct ggccgaaact 4501 aatccgccct gcatacccta tatcggccta attcttcagg atctgacgtt tgtgcatgtg 4561 ggcaaccagg attacttgtc caagggcgtc attaacttct ccaagcgctg gcagcagtac 4621 aacataattg acaacatgaa acgttttaag aaatgtgcct atccatttcg acgcaacgag 4681 cgcatcatac gcttctttga taacttcaag gactttatgg gcgaggagga gatgtggcag 4741 atatccgaga agataaagcc gcgcggccgc cgccccgtta actattagtc ttcaagcagc 4801 aagagcaaaa caccaatatt atatattaca agaagaaata tatacatata tatacaatat 4861 taattaaaca gtgcaaaacg gttgccgcgt cttggaggat ggagaagcat cgtcatcatc 4921 aggagcagga gcagccgaca actattctaa tgggtctgag caataacgtt cgctattctc 4981 tgtctacata tatacaatta tacaagatat ctagctatag atcagaaata catatactta 5041 cataagatat agcgaagcag atacggatac agatgcacgt gtagccgcgt acaaataaca 5101 actaacaaat aacgagccga tctgtagttt aactattaag ctctgtgaca agctaacaac 5161 tccccaccaa taatcgagtc cctatctata cggctcccgg aattttcatc gggaaattcg 5221 ccagcactag aacaccaaac ttaagaacca ccagagatga acaaccaatc aagaaatcag 5281 caattttcgc ttttgttttg agatctcttt ttacacaaga acacaacgaa tttttggaaa 5341 caagctacgt gtgaacgtag aggccaaccg acaaactgac aaactatatt cgacgatata 5401 tatagagcga tatctcggac tatgaatcga tgcaatccac gagcagaaca ccaagcaacc 5461 aagcacacag cgcgtattat gcaattctct taaaacaccc aaaatataga ataccctatc 5521 cttgtgtgtt agaagttatt gaaaatcaga aatcagaaaa atggataaca gaagcggtgc 5581 cgatcaaatc aatcaaaaaa ttatttcgcg actcaattaa tcgaagaaac ttttaaagtt 5641 acaaaaaaaa aaaccaaaca aaaaaaaaac aaaacccatg ggagattacc taaattcaat 5701 ttgcttttaa atgtacgact aacataaaaa atatttatgg gcatgtaata atagttctaa 5761 atatagcttt tgactcctcc tttcgatcct gcaaggaata aatctattga tattgcgtgt 5821 aaaaataatg aacaagagaa caaatctgga gcagagtcaa aactgaatga aatcgaaatt 5881 aaatcgacct caagttagtt gtttttacta agcaaaatgc aaaaagcaaa actctgtctc 5941 gtctgaaaac tgaaaatatt gtcttcttaa ttagaaatgg gaaaaagaaa aaaggctgct 6001 tatttgaaga atttaattcc cgatcaccat agccatctta cttgaaagta aataaattca 6061 tttgtgttga gtggattcgg tcttcttttt gctgctgctt ccgctgccgc tggcgcataa 6121 attattttta ctaagctaac gaacctaagg ataacaattt attcgttttt ttttctccta 6181 tttttaaatt aaatattttg tatatgtaga gaaaattttc aattgtaaat gtatgtattt 6241 gtaactaaat gttatgcgtg tattcgtaag aagaatgaaa atagctacca caatcaatgt 6301 atttttcctt ta