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LOCUS XM_017156611 6337 bp mRNA linear INV 09-DEC-2024 factor (C3G), transcript variant X1, mRNA. ACCESSION XM_017156611 VERSION XM_017156611.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017156611.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6337 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..6337 /gene="C3G" /note="C3G guanyl-nucleotide exchange factor; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:108067537" CDS 95..4813 /gene="C3G" /codon_start=1 /product="guanine nucleotide-releasing factor 2 isoform X1" /protein_id="XP_017012100.2" /db_xref="GeneID:108067537" /translation="MPQFDESFLSDCALADRWHFYSYTVKQLPPKLNLNLSSNPNLTA NTNPSQDEHHHHRCLWKTHRQSWSPPDGNNNHSPSGNSNGNSNTCNISTGNTLHSIKF HRRRKYKKLARLALSTPAIPRQMDMDVVVDREFDMEMDADKDTPVPLKNAVCHGSISS PSTPGTCSSGIGVGGGGCSSSSNNSINSGGYSAACTPPPPTSHQQHQGTPGGSSRGGG SVAGSGGASGVPPPAPPSAGSSGHKNSLKGTKLARRARSFKDDLIEKISLMRTTNNTL GRSHSPHSPRTKHGSKAPPTTEEVQRSTQTLETHVKDISNALKHFRDVILKKKLEVLP GNGTVILETIASMYSVIQTYTLNENSAIMSGATQQVYQSLGKLIKLCDEVMLSEESGE CASLSNENVREVIDLLEDAVRNLVTLAQGKLKEQDQCAFRYSGTGLGGIGAAAEIMGK VTASPGVMMGSHLPGGGGAGGGGGIMRVSAVSAVSAESAAIAQRTSLPDIALTPKDRD ILEQHSVNPMRGSHSTESILRDTSPPPKPPLPNRASNPPPLPPKRRSQPGSQPLGTGM GLGMGLGSSSSTTSTANQSTNISINSDLDCSSNISLLNYGVDRLSVRSRSPDENSQCS FDSALNHSRDEEDQQQQQNQQLQQRQFPKMPGMMDNNEEMDKLVSYSAAMETPLPLPI GGNGGVGNAAAPGGGGAAAAAATGGGETNSNRHSNESGFVSMREFQSVQSSTKSSSSN SEIAIGSSISSSTIEYQSSSSSVVSHSQSRQISSSSSSCTTTTTSSTTTGYGSSSSEQ LEQSAPALPPKSIQRSSLTRHESTGGGTAAGDELDEASSGWASQSEMPEMRQLSPHHQ LGLMGHHPHAASQLQHHWPSKHRSLIEGSGSCGAFDQRHLVGDHLEQEPPPLPMKKKH MFQSVAFSVLAYMEICSASTRSIEQHRHTMHAYNISRNISHSQTMNIMPMSKELSPEL EIPPALPPKNYKQRMATSMGSSPSLQPIIVTTTPPPSPKPPLAENGSTTGRPDSRMAT VCEELNDGMVGEEAMPVLDSNENVSDGQTFYCHSHQLPGELVVGEDGSGQPISTPQVL EEEEEPLQQQEEPATMAEESAVSAVDDPSEILPAAKPEIAPAEDAEEEEEMLINMLEE VNITRYLILKKREEDGPEVKGGHIDALIVHASRVQKVADNAFCEAFITTFRTFIQPID VIEKLTHRYTYFFCQVQDNKQKAAKETFALLVRVVNDLTSTDLTSQLLSLLVEFVYQL VCSGQLYLAKLLRNKFVEKVTLYKEPKVYGFIGAELGGAGGGGAGAGIAGSGGSSAAG GGGGGGGGGGANQPSLLDLKSLEIAEQMTLLDAELFTKIEIPEVLLFAKDQCEEKSPN LNKFTEHFNKMSYWARSKILRLQDAKEREKHVNKFIKIMKHLRKMNNYNSYLALLSAL DSGPIRRLEWQKGITEEVRSFCALIDSSSSFRAYRQALAETNPPCIPYIGLILQDLTF VHVGNQDYLSKGVINFSKRWQQYNIIDNMKRFKKCAYPFRRNERIIRFFDNFKDFMGE EEMWQISEKIKPRGRRPVNY" misc_feature 3575..3976 /gene="C3G" /note="Guanine nucleotide exchange factor for Ras-like GTPases; N-terminal motif; Region: RasGEFN; smart00229" /db_xref="CDD:214571" misc_feature order(3632..3634,3767..3769,3779..3784,3791..3793, 3800..3805,3902..3904,3911..3913) /gene="C3G" /note="GTPase interaction site [polypeptide binding]; other site" /db_xref="CDD:100121" misc_feature 4100..4771 /gene="C3G" /note="Guanine nucleotide exchange factor for Ras-like small GTPases. Small GTP-binding proteins of the Ras superfamily function as molecular switches in fundamental events such as signal transduction, cytoskeleton dynamics and intracellular trafficking; Region: RasGEF; cd00155" /db_xref="CDD:238087" misc_feature order(4199..4207,4229..4234,4238..4246,4250..4255, 4262..4267,4274..4276,4373..4375,4382..4387,4391..4399, 4403..4414,4418..4423,4475..4477,4490..4498,4505..4507, 4544..4552,4559..4567,4571..4579,4583..4594,4637..4639, 4649..4651,4751..4753,4760..4765) /gene="C3G" /note="Ras interaction site [polypeptide binding]; other site" /db_xref="CDD:238087" polyA_site 6337 /gene="C3G" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gctatcggca cattcgtttt ggccaaacat tttaaccaca acaaattgtt atgcgtgttg 61 ttgatgttgc tgcattagct ggccattatg caatatgccg cagtttgatg aatctttttt 121 gagcgactgt gcgctggccg atcgctggca tttctactcg tacacggtca agcaattgcc 181 accgaaactg aatctgaatc tgagttcgaa tccaaatcta actgcaaata caaatcccag 241 ccaagatgaa catcatcacc atcgctgcct ttggaagacg caccggcaat cgtggtcacc 301 gcccgacggc aacaataatc acagtccgag tggcaacagc aacggcaaca gcaacacctg 361 caacatcagt accggcaaca cgttgcatag catcaaattc cacagacgtc gcaaatacaa 421 aaagctggca cgattggcgc tatcaacgcc agcgattcca cggcagatgg atatggatgt 481 ggttgtggat agggagttcg atatggagat ggacgcagac aaagacacac ctgtgccgct 541 caagaatgcg gtgtgccacg gcagcatcag ttctccatcc acgcccggca cctgttccag 601 tggcatcgga gtgggcggtg gcggctgcag cagcagcagc aacaacagca tcaacagcgg 661 cggctactcc gccgcctgca ccccgccacc acccacgtcg catcagcagc atcagggaac 721 gcccggagga tctagtcggg gaggaggatc ggtagcggga tcgggaggag caagtggagt 781 gccaccaccg gcaccgccca gtgcgggatc gtcgggccac aagaacagcc taaagggcac 841 caagctagcg cgccgggcgc gctccttcaa ggacgatctg atcgagaaga tctccctgat 901 gcggaccacc aacaacaccc tgggtcgctc ccactcgccg cacagtccgc gcaccaagca 961 cggatcgaag gcgccgccga ccaccgagga ggtgcagcgc tccacccaga cgctggagac 1021 gcatgtcaag gacatctcga atgcgctcaa gcatttccgg gatgtaatac tcaagaagaa 1081 gctggaggtg ttgccgggca acggtacggt catcctggag accatagcca gcatgtactc 1141 cgttatccaa acctatacac tgaacgaaaa cagtgccatc atgagcggcg ccacgcagca 1201 ggtctaccag agcctgggca agctcatcaa gctctgcgac gaggtgatgc tctccgagga 1261 gagcggcgag tgcgcctccc tgagcaacga gaatgtgcgg gaggtgatcg atctgctgga 1321 ggatgcagtg aggaatctcg ttacgctggc gcagggaaag ctgaaggagc aggatcagtg 1381 cgcgtttcgc tacagcggca ctggcctggg cggcatcgga gctgcggccg agatcatggg 1441 caaggtgacg gcctcgccgg gcgtcatgat gggtagtcat ttgcccggtg gcggtggtgc 1501 cggtggcggt ggcgggatta tgcgcgtctc agccgtctca gccgtctccg ccgaatcggc 1561 ggccatcgca cagcgcacct cgctgccgga catcgcactc acgcccaagg accgcgacat 1621 cctggagcag cacagtgtga atcccatgcg cggctcccac agcaccgaaa gcatcctgcg 1681 cgacacgagt ccaccgccga agccaccgct gcccaaccgg gccagcaatc cgccaccttt 1741 gccgcccaag cgacgcagtc agccgggcag tcagcccttg ggcacgggca tgggtttggg 1801 catgggactg ggctcctcct cgtcgaccac ctccaccgcc aatcagtcga cgaatatcag 1861 catcaactcg gacctggact gcagctcaaa catctcgctg ctgaactacg gcgtggatcg 1921 cctatcggtg cgttcgcggt caccggatga gaatagtcag tgctcctttg actcggcgtt 1981 gaatcactcg cgcgatgagg aggaccagca gcagcagcag aatcagcagc tgcagcagcg 2041 gcagtttcca aagatgcccg gaatgatgga caacaacgag gagatggaca agctggtcag 2101 ctacagcgcc gccatggaga caccgcttcc gcttccgatc ggtggtaatg gtggtgttgg 2161 gaatgctgct gcccccggag gaggaggagc agctgctgca gcggcgactg gtggcgggga 2221 aactaacagc aatcgccact caaacgaatc gggcttcgtt tcgatgcgcg agttccagag 2281 tgtgcagtcc tccacaaagt cctccagcag caactcggag attgcgatag ggagcagcat 2341 tagcagcagc accatcgagt accagtcgtc gtcgtcgtcg gtggtctcgc acagccagtc 2401 gcggcagatc tcgtcgagca gcagtagctg caccaccacc accacgagca gcaccaccac 2461 gggctatggg agcagcagca gcgagcagct ggagcaatcg gcgcccgctt tgccgccgaa 2521 gagcatacag aggagcagcc tgacccgcca cgagtcgacg ggcggtggaa ctgcagccgg 2581 tgacgagctg gacgaggcct cctccggatg ggccagccag tcggagatgc ccgagatgcg 2641 gcagctgtcg ccgcaccatc agctcggcct catgggccat catccgcatg ccgcatccca 2701 gctgcagcac cactggccct cgaagcatcg cagcctgatc gagggcagcg gcagctgcgg 2761 cgccttcgac cagcgtcacc tggtcggtga ccacctggag caggagccgc cgccgctgcc 2821 gatgaagaag aagcacatgt ttcaaagtgt ggccttttcg gttctggcct acatggagat 2881 ctgctcggcg tccacgcgat ccattgagca gcaccgccac acgatgcacg cctacaacat 2941 tagtcgcaac atctcgcaca gccagaccat gaacatcatg cccatgagca aggaactctc 3001 gccggagctc gagataccgc ctgcgctgcc gccaaagaac tacaagcagc gcatggcgac 3061 aagcatgggt tcgtcgccct cgctgcagcc gatcatagtg accaccacgc cgccgccgag 3121 tccgaagccg ccgctggccg agaacggatc gacgacgggc aggccggaca gccggatggc 3181 caccgtctgc gaggagctca acgatggaat ggtcggtgag gaggcgatgc ccgtgctgga 3241 cagcaatgag aacgtgagcg atggccagac cttctattgc cactcgcatc agctgcccgg 3301 cgagttggtc gtgggcgagg acggctctgg acagccgatc agcacgccac aggtgctcga 3361 ggaggaggag gagccgctgc agcagcagga ggagccagcc acgatggcag aggagtcagc 3421 tgtctcggcc gtcgatgacc ctagcgagat tctgcccgct gccaagccag agattgcccc 3481 cgccgaggat gccgaggagg aggaggagat gctgatcaac atgctggagg aggtcaacat 3541 cacacggtac ctgatactca agaagcggga ggaggacggg cccgaggtga agggcggcca 3601 catcgacgca ctcatcgtcc acgccagccg cgtccagaag gtcgccgaca atgcattctg 3661 cgaggccttc atcaccacct tccgcacctt catccagccg atcgacgtga tcgagaagct 3721 gacccatcgc tacacatact tcttctgtca agtgcaggac aacaagcaga aggccgccaa 3781 ggagaccttt gcgctgctgg tccgagtcgt caacgatcta acgtcgacgg atctcaccag 3841 ccagctgctg agcctgctgg tggagtttgt ctaccagttg gtctgctctg gccagctcta 3901 cttggccaag ttgctgcgca acaagttcgt ggagaaggtg acgctgtaca aggagcccaa 3961 ggtgtacggc ttcattgggg ccgagttggg tggagccggc ggtggtggcg ccggagcggg 4021 aatcgccggg agcggtggaa gcagtgcggc aggaggggga ggaggaggag gaggtggtgg 4081 tggggccaac cagcccagcc tgctcgacct caagtcactg gagatcgccg aacagatgac 4141 gctgctggac gccgagctgt tcacgaagat cgagatacca gaagtattac tatttgccaa 4201 agatcagtgc gaggagaagt cgcccaacct caacaagttc accgagcact tcaacaagat 4261 gtcctactgg gcgcgctcca agattctgcg cctgcaggat gccaaggagc gggagaagca 4321 tgtgaacaag ttcatcaaga tcatgaagca tctgcgcaag atgaacaact acaactcgta 4381 tctggcgctg ctgtctgccc tcgattcggg tcccataagg agattggagt ggcaaaaggg 4441 catcaccgag gaggtgcgct ccttctgcgc cctcatcgat tccagctcca gttttcgggc 4501 ctatcgccag gccctggccg aaactaatcc gccctgcata ccctatatcg gcctaattct 4561 tcaggatctg acgtttgtgc atgtgggcaa ccaggattac ttgtccaagg gcgtcattaa 4621 cttctccaag cgctggcagc agtacaacat aattgacaac atgaaacgtt ttaagaaatg 4681 tgcctatcca tttcgacgca acgagcgcat catacgcttc tttgataact tcaaggactt 4741 tatgggcgag gaggagatgt ggcagatatc cgagaagata aagccgcgcg gccgccgccc 4801 cgttaactat tagtcttcaa gcagcaagag caaaacacca atattatata ttacaagaag 4861 aaatatatac atatatatac aatattaatt aaacagtgca aaacggttgc cgcgtcttgg 4921 aggatggaga agcatcgtca tcatcaggag caggagcagc cgacaactat tctaatgggt 4981 ctgagcaata acgttcgcta ttctctgtct acatatatac aattatacaa gatatctagc 5041 tatagatcag aaatacatat acttacataa gatatagcga agcagatacg gatacagatg 5101 cacgtgtagc cgcgtacaaa taacaactaa caaataacga gccgatctgt agtttaacta 5161 ttaagctctg tgacaagcta acaactcccc accaataatc gagtccctat ctatacggct 5221 cccggaattt tcatcgggaa attcgccagc actagaacac caaacttaag aaccaccaga 5281 gatgaacaac caatcaagaa atcagcaatt ttcgcttttg ttttgagatc tctttttaca 5341 caagaacaca acgaattttt ggaaacaagc tacgtgtgaa cgtagaggcc aaccgacaaa 5401 ctgacaaact atattcgacg atatatatag agcgatatct cggactatga atcgatgcaa 5461 tccacgagca gaacaccaag caaccaagca cacagcgcgt attatgcaat tctcttaaaa 5521 cacccaaaat atagaatacc ctatccttgt gtgttagaag ttattgaaaa tcagaaatca 5581 gaaaaatgga taacagaagc ggtgccgatc aaatcaatca aaaaattatt tcgcgactca 5641 attaatcgaa gaaactttta aagttacaaa aaaaaaaacc aaacaaaaaa aaaacaaaac 5701 ccatgggaga ttacctaaat tcaatttgct tttaaatgta cgactaacat aaaaaatatt 5761 tatgggcatg taataatagt tctaaatata gcttttgact cctcctttcg atcctgcaag 5821 gaataaatct attgatattg cgtgtaaaaa taatgaacaa gagaacaaat ctggagcaga 5881 gtcaaaactg aatgaaatcg aaattaaatc gacctcaagt tagttgtttt tactaagcaa 5941 aatgcaaaaa gcaaaactct gtctcgtctg aaaactgaaa atattgtctt cttaattaga 6001 aatgggaaaa agaaaaaagg ctgcttattt gaagaattta attcccgatc accatagcca 6061 tcttacttga aagtaaataa attcatttgt gttgagtgga ttcggtcttc tttttgctgc 6121 tgcttccgct gccgctggcg cataaattat ttttactaag ctaacgaacc taaggataac 6181 aatttattcg tttttttttc tcctattttt aaattaaata ttttgtatat gtagagaaaa 6241 ttttcaattg taaatgtatg tatttgtaac taaatgttat gcgtgtattc gtaagaagaa 6301 tgaaaatagc taccacaatc aatgtatttt tccttta