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LOCUS XM_017156569 2415 bp mRNA linear INV 09-DEC-2024 (cytosine(34)-C(5))-methyltransferase Nsun2 (Nsun2), mRNA. ACCESSION XM_017156569 VERSION XM_017156569.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017156569.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2415 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2415 /gene="Nsun2" /note="tRNA (cytosine(34)-C(5))-methyltransferase Nsun2; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108067521" CDS 136..2322 /gene="Nsun2" /codon_start=1 /product="tRNA (cytosine(34)-C(5))-methyltransferase" /protein_id="XP_017012058.2" /db_xref="GeneID:108067521" /translation="MGRNKKQNPFAARKRQKRENAPERPDRRALPYEEIKRDNAAFIK YYHLQAICADEDEWTQFLASIRDNLPTTFRVTGFKDEAKALLSIIETQLFTEYVRAVA ELHEKRPEEVERPLCLPWYPNGLAYQLHLTRKDIRRSEPLYRLHNFLIVETTAGGISR QEAVSMIPPIVLDVRPTDKVLDMCAAPGSKTAQLIEALHAAPEEHKIPPGFVLANDVD NNRCYMLVHQAKRLNSPCLLVTNHDSSAFPNLLVTQSDGSRGILKFDKILCDVPCSGD GTLRKNPDIWLKWNLAQAYNLHGIQYRIVRRGAEMLEVGGRLVYSTCSLNPIENEAVL QRILKEADGALELVDAGHLVPGLKYKPGMTQWKLATKEVDQIFTSFDEVPESLHTIIR PGMFPLPEEEMKKIGLEKCLRVLPHLQDSGGFFVAVLEKRRRLDFEKNDVAAVVEQNE QVKEPQLDAEGKPIEEKSVPWGPQRKKRRLHGYKEDPYVFFGENDADYAAIKEFYQLD ESLSQRCLLTRCVTDKKKNIYYCSDRIRDLVVNNEHNIKMINTGVKTFVRCENRHTVH PFRLAQEGLQTSNAFMGASRRIQVEREDLVMMLNCTDPTQPPSTHELRKETQERCKEL GVGSCILKYVDERFTLYTVGWRGTSSLRAYVHKDETIHILRLLGADLSKFETNKYEEA RVAAAAAAAEAGKDAEVEGEAEGESESSGEGAATTPMDTEEVATKS" misc_feature <298..1434 /gene="Nsun2" /note="16S rRNA C967 or C1407 C5-methylase, RsmB/RsmF family [Translation, ribosomal structure and biogenesis]; Region: RsmB; COG0144" /db_xref="CDD:439914" polyA_site 2415 /gene="Nsun2" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tcgacggcca gtgttgccag tcagccggcg aacacgtttt atttattcgt ttcgttggaa 61 aataaataaa cgtagctttt ccgtatttct taacttaata aagataataa ataagtttta 121 gctaaatctt gataaatggg acgaaacaag aagcagaatc cctttgcggc gcgcaagcgg 181 caaaagcggg agaacgctcc cgagcgcccc gatcgccgcg ccctgccgta cgaggagatc 241 aagcgggaca acgccgcctt catcaagtac taccatttgc aggcaatctg cgcagacgag 301 gatgagtgga cgcagttcct cgcctccatc agggacaacc tgcccaccac tttccgggtg 361 acgggcttca aggacgaagc gaaggccctg ctctccatca ttgaaaccca actctttaca 421 gaatatgtgc gcgcggtggc cgagctgcac gagaagcggc ccgaggaggt ggagcgtccg 481 ctgtgcctgc cctggtatcc caatggcctg gcctaccagc tgcatctcac ccgcaaggac 541 atccgccgct cggagccgct ctacaggctg cacaatttcc tcatcgtcga gacaacggct 601 ggtggtatta gccggcagga ggccgtctcc atgattccgc ccatcgtttt ggatgtccga 661 cccacggaca aagtgctcga catgtgcgcc gctccgggca gcaagacggc gcagctcata 721 gaggccctgc atgcggcgcc cgaggagcac aagataccgc ccggcttcgt gctggccaac 781 gatgtggaca acaataggtg ctacatgctc gtccaccagg ccaagcgcct taactcgccc 841 tgcctgctgg tcacgaacca cgacagcagc gcttttccta acttgctggt cacccagtcg 901 gatggctcgc gcggcatcct caagtttgac aagatcctct gcgatgttcc ctgctccggt 961 gatggcacgc tgcgcaagaa tcccgacatc tggctcaagt ggaacctggc gcaggcctac 1021 aacctgcatg gcattcagta caggattgtg aggcgtggcg ccgagatgct cgaggtgggc 1081 ggtcgcctgg tttactccac ctgctcgctt aatcccatcg agaacgaggc ggtgctgcag 1141 cgcatcctca aggaggccga cggagcactg gagctggtgg atgccggaca tttagtgccg 1201 ggtcttaagt acaaaccggg gatgacgcag tggaagctgg ccaccaagga ggtggaccag 1261 atcttcacca gcttcgacga ggtgcccgag agcctgcaca ccatcatacg acccggcatg 1321 ttccctttgc ccgaagagga gatgaagaaa ataggcctgg agaagtgcct gcgcgtgttg 1381 ccgcatctcc aggacagcgg cggcttcttt gtggccgtcc tggagaagcg tcgtcggctg 1441 gatttcgaga agaacgacgt ggccgccgtg gtggagcaga acgagcaggt caaagaaccc 1501 caactggatg cggagggcaa gcccattgaa gagaaatcgg tgccgtgggg accgcagcgg 1561 aagaagcgac gcctgcacgg ctacaaggag gatccctatg tgttcttcgg cgagaacgat 1621 gccgactacg cggccatcaa ggagttctac cagctggacg agtccctcag ccagcgctgc 1681 ctgctgacgc gttgcgttac cgacaagaaa aagaacatct actactgctc cgaccgcata 1741 cgcgatctgg tggtcaacaa cgagcacaac atcaagatga tcaacacggg cgtcaagacc 1801 ttcgtgcgct gcgagaatcg gcacacggtg cacccattcc gcttggccca ggagggcctg 1861 cagacctcga atgcgttcat gggcgccagc aggcgcattc aagtggagcg cgaggatctg 1921 gtgatgatgc tcaactgcac cgatcccacg cagccgccgt cgacgcacga gctgcggaag 1981 gagacccagg agcgctgcaa ggaactgggc gtgggcagct gcatcctcaa gtacgtggac 2041 gagcggttca ccctgtacac ggtgggctgg cgcggcacct ccagcctgcg cgcctacgtc 2101 cacaaggacg agaccatcca catcctgcgg ctgctgggcg ccgatctcag caagttcgag 2161 accaacaagt acgaggaggc gcgagtggcg gccgccgcgg cagctgcaga agctggaaag 2221 gatgctgaag tcgaaggtga agctgaaggt gaatctgaat cctcgggcga aggagcagca 2281 accacgccca tggacaccga agaggtggcc acgaaaagct agtaaagcag ctctggaaac 2341 tagcatttaa gcggaccaat tgtataaata ctacgaatca aaagtatata ttttcatttc 2401 ccaaccaaac aaaaa