PREDICTED: Drosophila takahashii ribosomal protein L17 (RpL17),

LOCUS       XM_017156559             761 bp    mRNA    linear   INV 09-DEC-2024
            mRNA.
ACCESSION   XM_017156559
VERSION     XM_017156559.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017156559.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..761
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..761
                     /gene="RpL17"
                     /note="ribosomal protein L17; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:108067513"
     CDS             36..596
                     /gene="RpL17"
                     /codon_start=1
                     /product="large ribosomal subunit protein uL22"
                     /protein_id="XP_017012048.1"
                     /db_xref="GeneID:108067513"
                     /translation="MGRYSRESDNVAKSCKARGPNLRVHFKNTHETAQAIKRMPLRRA
                     QRYLKAVIDQKECVPFRRFNGGVGRCAQAKQWKTTQGRWPKKSAEFLLQLLRNAEANA
                     DCKGLDADRLVVHHIQVNRAQCLRRRTYRAHGRINPYMSSPCHVEVILTEKEEVVSKA
                     TDDEPTKKKLSKKKLQRQKEKMLRSE"
     misc_feature    36..521
                     /gene="RpL17"
                     /note="60S ribosomal protein L17; Provisional; Region:
                     PTZ00178"
                     /db_xref="CDD:240306"
     misc_feature    order(78..83,147..155,159..164,168..173,330..347,369..386,
                     480..485)
                     /gene="RpL17"
                     /note="putative translocon binding site [active]"
                     /db_xref="CDD:238205"
     misc_feature    order(87..89,93..95,102..104,108..116,123..125,135..137,
                     144..146,324..326,336..338,345..347,381..383,387..395,
                     399..401,408..410,444..461)
                     /gene="RpL17"
                     /note="protein-rRNA interface [nucleotide binding]; other
                     site"
                     /db_xref="CDD:238205"
     polyA_site      761
                     /gene="RpL17"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tttacttgta gcccagggcc ctgcgatatt gaaaaatggg ccgttactct cgcgagtcag
       61 acaacgtggc caagtcgtgc aaggcgcgcg ggcccaatct acgtgtgcac ttcaagaaca
      121 cacatgagac cgcccaggcc atcaagcgca tgcccctgcg ccgcgcccag cgctacctga
      181 aggccgtcat cgaccagaag gagtgcgtgc ccttccgccg cttcaacggc ggcgtgggcc
      241 gttgcgccca ggccaagcag tggaagacca cgcagggtcg ctggcccaag aagtccgccg
      301 agttcctgct ccagctgctg cgcaacgccg aggctaatgc cgactgcaag ggtctggatg
      361 ccgaccgcct ggtcgtccac cacatccagg tgaaccgcgc ccagtgcctg cgtcgccgca
      421 cgtaccgtgc ccacggtcgc atcaacccct acatgtcctc gccctgccac gtcgaggtga
      481 tcctcaccga gaaggaggag gtcgtctcca aggccaccga cgacgagccc accaagaaga
      541 agctctccaa gaagaagctg cagcgccaga aggagaagat gttgcgttct gaataaagtg
      601 ggtgttctgg gcccagccgc ccaagccggt gacaacaaca actgaagctc cattcttttt
      661 tttatgtatc cccccctaaa gataatgcct gtaacttaga gaagtttaaa gtgtgtggag
      721 aatacagagc acgaaagccc agagatttga ccacctggaa a