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LOCUS XM_017156558 1688 bp mRNA linear INV 09-DEC-2024 mRNA. ACCESSION XM_017156558 VERSION XM_017156558.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017156558.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1688 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..1688 /gene="GlcAT-I" /note="Glucuronyltransferase I; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:108067514" CDS 73..993 /gene="GlcAT-I" /codon_start=1 /product="galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase I" /protein_id="XP_017012047.2" /db_xref="GeneID:108067514" /translation="MSEVRIRPRQVLILIIVFLVVLMMVHRNGKRTCQGPEYLQAMFV QADTLPTIYAVTPTYPRPAQKAELTRLSHLFMLMPHLHWIIVEDTNATTPLVTNLLER AGLEKRSTQLNIKTPPEFKLQGKDPNWIKPRGVEQRNLALAWLRNHVDVDRHSIVFFM DDDNSYSTELFEEMGKIERGRVGVWPVGLVGGLMVERPLLSEDGSKVTGFNAAWRPER PFPIDMAAFAISMDLFIRNPQAQFSYEVQRGYQESEILRHLTTRDQLQPLANNCRDVL VWHTRTEKTKLNAEEALLKKGQRSDGGMEV" misc_feature 220..924 /gene="GlcAT-I" /note="Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis; Region: GlcAT-I; cd00218" /db_xref="CDD:132995" misc_feature order(247..249,334..336,553..564,658..660,712..714, 724..726,739..741,826..828,907..909) /gene="GlcAT-I" /note="active site" /db_xref="CDD:132995" misc_feature order(256..261,265..273,277..282,289..294,298..303, 565..567,571..579,637..639,652..657,703..705,709..711, 895..897,904..906,910..912,916..921) /gene="GlcAT-I" /note="putative dimerization interface [active]" /db_xref="CDD:132995" misc_feature 553..561 /gene="GlcAT-I" /note="DXD motif [active]" /db_xref="CDD:132995" polyA_site 1688 /gene="GlcAT-I" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gtggccacac taattgccca tttgtttgtt ttaccgaaat cgaggttttt taggaagttc 61 aagagccgca ggatgtcgga ggtccgcatt cggccgcgcc aggtcctcat cctgatcatc 121 gtcttcctgg tggtgctgat gatggtccac cgtaacggca agcgcacctg ccagggcccg 181 gagtacctgc aggccatgtt cgtccaggcg gacacgttac ccacgatcta cgccgtcacg 241 cccacatacc cgcgtcccgc ccaaaaggcg gagctgacca gactatcaca ccttttcatg 301 ctgatgccgc acctgcactg gatcattgtg gaggacacga atgccaccac gccgctggtc 361 acgaacctgc tggagcgggc gggcctggag aagcgctcca cgcagctgaa catcaagacg 421 ccgccggagt tcaagctgca gggcaaggac cccaactgga taaagccacg cggcgtggag 481 cagcgcaatc tggctttggc ctggctgagg aatcacgtgg acgtcgaccg gcactcgatt 541 gtgttcttca tggacgacga caactcctat tccaccgaac tgttcgagga gatgggcaag 601 atcgagcggg gtcgcgtggg cgtctggccg gtgggcctcg ttggcggctt gatggtggag 661 cggccgctgc tcagcgagga tggcagcaag gtgaccggct tcaatgccgc ctggcgaccc 721 gagagaccct tccccatcga catggccgcc tttgccatca gcatggacct gttcatccgc 781 aatccgcagg cccagttctc gtacgaggtg cagcggggct accaggagag cgagatcctg 841 cgtcatctga ccaccaggga tcagctgcag ccgctggcca acaactgccg ggacgtcctc 901 gtctggcaca cgcgcaccga gaagaccaag ctgaacgccg aggaggcgct cctcaagaag 961 ggccagagat ccgacggcgg catggaggtt taacccccgg gaaaccactg tatatatgct 1021 gtcatcctag tgaatttatt taatgtgttc gtcccgagaa accgtcactc cttacagagg 1081 tttagttttc ctcatagcat agtttaaaga aatatctttt caatatctta tcttatctta 1141 actttttccc caaaatattc ctattttatg ttaccctatt actttgtaaa aacccggtga 1201 aggcagctca attatgttag gctaaatact ttaattagtg caatctaaac atagatctta 1261 atattctgaa agccacagat tgcacacgga agaaaatgta tttgagtgga gaagttaatc 1321 aaatatattg accaagcaca agagattaga aaccaaagga gatttttgtg acacccccga 1381 gtattagcgc aagtttcaat tacgaaacac tactagttgt acaatgctca aatcaaagtt 1441 gtaacgatag tccctagtct atctgcaatg cccgatatct gttgtggttt attattttac 1501 ctcgaaagtc attaaacgaa ttgccgcttt acattttatt taaactataa gtacgcctta 1561 atttacccca cttaattgta tattaatcca ctagaaattg taaaatatcc gcagaatgta 1621 agcttcccct gtgtgcctcc cgttcaacgc caataaaatt gataccgata acgattcaca 1681 gacaacaa