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LOCUS XM_017156234 1832 bp mRNA linear INV 09-DEC-2024 biosynthesis class Q (PIG-Q), transcript variant X1, mRNA. ACCESSION XM_017156234 VERSION XM_017156234.2 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017156234.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1832 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..1832 /gene="PIG-Q" /note="phosphatidylinositol glycan anchor biosynthesis class Q; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108067271" CDS 284..1729 /gene="PIG-Q" /codon_start=1 /product="uncharacterized protein PIG-Q" /protein_id="XP_017011723.1" /db_xref="GeneID:108067271" /translation="MSIKIYLPFNYYYLKKPTNLYGQVQINEDNVVAYYVLEASVLEF RDKAIDHASSDMRFLGSILNVDFNADQIQYLKFNMRLCFTYNSSQANITLVYTGITPE YLKHIKLILYEKPMLRNLFVGGESVNNRPIEHNDNDSSDCDFLELSRLTQPTEEALRN PKNSTKNSVLYMLTLIADFPITVFKYVVENVFVNSIMVHTSIYKHFKEWQTTCDGRSR PANIALDRILGMILMLILFSLATQPGDFLIQISHYVIDELYSLLKVLEGSPIGLKLNI HLNNFFLDCFKYHIELWSTFLDFIEPLVRQVFLAIGVFGCLGLTFQIALLVDLISIIG LHSHCFYIYTKVLYNVERKGLSVLWQVVRGNRYNILKGRTESHNYMNRQLYLATIFFS AILFLFPTTLVYYIVFAALKALTFATLSMFEFFRRKLLNLPIEGCVKRLLKGCNDIDC LQIKDVLPHETDFLMHKHQKIDVTVYKITAL" misc_feature 947..1606 /gene="PIG-Q" /note="N-acetylglucosaminyl transferase component (Gpi1); Region: Gpi1; pfam05024" /db_xref="CDD:461527" polyA_site 1832 /gene="PIG-Q" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tatcgtaatc gacatgacat gtctttttga ggtggcaaaa gttaactccc ttagttacat 61 tttgtttagg aatatttcac tacccttcaa tgaaaaataa taatgagcat aaatttgtaa 121 accacaagta aataatcaaa aattcaaata ttcaattttg cctatcatcc caaaaaagaa 181 aactgtgacg tcacacggcg ggtgcacaac cttctcaggc atgctgcaat tgttttgtat 241 acataataga aaaccggtgt ttttgtgatt taaacgactt attatgagca ttaagatata 301 tttgccgttc aactattatt accttaagaa gcccacgaat ttgtacggcc aagtgcaaat 361 aaatgaagat aatgtcgtag catattacgt tctggaagct tcggtcctgg agtttcgtga 421 taaagccata gatcatgcat cgagcgatat gcgtttcttg ggctccatcc tgaacgtgga 481 cttcaatgca gatcaaatcc aatatctgaa attcaatatg cgactgtgtt tcacatacaa 541 cagcagccaa gcaaatataa cactggtcta caccggtatt accccagaat atctcaagca 601 cattaagcta attctctatg aaaaaccaat gctaagaaat ctgtttgtcg gcggggaatc 661 tgtgaataac cgacccatag aacataatga taatgatagc agtgactgcg actttctcga 721 gctatccaga ttaacacaac ccacagaaga ggctctaagg aatccaaaga acagtaccaa 781 aaatagtgtt ctatatatgt taactctcat cgccgacttt cccataacgg tgtttaaata 841 tgttgttgaa aatgtgtttg tcaatagcat aatggttcat acaagcatct acaaacattt 901 caaggagtgg cagacaacct gtgatgggcg atctcgccct gctaatattg cacttgatag 961 aatattggga atgatattga tgctcatact tttctcccta gcgacacagc cgggagattt 1021 tctcattcaa atatcccact acgttattga tgagttatac agcctattga aggtactgga 1081 aggcagtcca attggcctca agctaaatat acatttaaat aatttctttc tcgactgctt 1141 taaatatcat attgaattat ggtcgacatt tttggatttc atcgaacctt tagtccgtca 1201 ggttttcttg gccattggag tatttgggtg cttgggtctt acattccaga tagccctcct 1261 agtggactta atatccataa ttgggttaca ttcgcattgc ttttatattt ataccaaagt 1321 gctctacaat gtagagagaa agggtctttc tgtactatgg caagtggtcc gagggaaccg 1381 gtacaatatt ttaaaaggtc gcacagagtc tcataattac atgaatcgtc aattatatct 1441 tgcaacgata tttttctcgg ccattctgtt tttgtttccc actacccttg tctactatat 1501 agtttttgct gctttaaagg cgcttacttt tgcaactctt agcatgtttg agtttttccg 1561 aagaaagctt ttgaatcttc cgattgaagg gtgtgtgaaa cggcttttaa aaggatgtaa 1621 tgacatagat tgtcttcaaa tcaaggatgt tttacctcac gaaacggatt tcctaatgca 1681 taaacaccag aaaatcgacg tgactgtgta taaaattaca gccttataaa agagccaaat 1741 agtaggaaaa agtgtgatat tttattttat ttaatatttg tttaaattgt atttatgact 1801 tcaaataata aaattcgatt tgatgatata aa