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LOCUS XM_017156222 2619 bp mRNA linear INV 09-DEC-2024 mRNA. ACCESSION XM_017156222 VERSION XM_017156222.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017156222.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2619 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2619 /gene="nonA" /note="no on or off transient A; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins" /db_xref="GeneID:108067262" CDS 132..2177 /gene="nonA" /codon_start=1 /product="protein no-on-transient A" /protein_id="XP_017011711.2" /db_xref="GeneID:108067262" /translation="MESAAKLDNTAPLPQRQQQRGNQPNKNVGKHNAQKQSDSADGSP AEKKPRFGGPNPNAQNQNGAVTGGGAPNQNKNFGNKGGFAANRNRNNQNQNRGGNHNR TFPAANNVNKPNNETPKAVVVNVAAKTSEPATAAASQSQPNPNASKGQNQRQGQNQNQ NQNQVQGQGQGQQGGLGNQGNHGGQGNGPGFRGRNVGNNQSASGGGGPLNQQRDNRNR GQRPGGPGGMNSSNMGGSGGGAGGPRGGEDFFIGQRLRSIAGPTIELEPVEVPTETKF SGRNRLYVGNLTGDITDDELREMFKPYGEISEIFSNLDKNFTFLKVDYHPNAEKAKRA LDGSMRKGRQLRVRFAPNATILRVSNLTPFVSNELLYKSFEIFGPIERASITVDDRGK HTGEGIVEFAKKSSASACLRLCNEKCFFLTASLRPCLVDPMEVNDDNDGLPEKAFNKK MPDFNHERSIGPRFADLNSFEHEYGSRWKQLHNLFKTKQDALKRELKMEEDKLEAQME YARYEQETELLRQELRKREVDNERKKLEWEMREKQAEEMRKREEETMRRHQGEMQSHM NRQEEDLLRRQQENTLFMQAQQLNSLLDQQEGFGNGGGGGNNNSSFDNFGGNSNSPFE VFRGNNNSNSTMIGNNSGPNTQDSFAFEFGVNNMNQGGNQRGNNGGGNNVPWGRRRF" misc_feature 966..1178 /gene="nonA" /note="RNA recognition motif 1 (RRM1) found in the p54nrb/PSF/PSP1 family; Region: RRM1_p54nrb_like; cd12332" /db_xref="CDD:409769" misc_feature order(966..968,1107..1109,1116..1121,1128..1133) /gene="nonA" /note="heterodimer interface [polypeptide binding]; other site" /db_xref="CDD:409769" misc_feature 1194..1433 /gene="nonA" /note="RNA recognition motif 2 (RRM2) found in the p54nrb/PSF/PSP1 family; Region: RRM2_p54nrb_like; cd12333" /db_xref="CDD:409770" misc_feature order(1209..1211,1218..1238,1248..1250,1260..1262, 1275..1277,1281..1298,1311..1313,1323..1325,1368..1373, 1383..1391,1395..1412,1416..1418) /gene="nonA" /note="heterodimer interface [polypeptide binding]; other site" /db_xref="CDD:409770" misc_feature 1404..1703 /gene="nonA" /note="NOPS domain, including C-terminal coiled-coil region, in p54nrb/PSF/PSP1 homologs from invertebrate species; Region: NOPS_NONA_like; cd12945" /db_xref="CDD:240580" misc_feature <1587..1907 /gene="nonA" /note="Guanylate-binding protein, C-terminal domain; Region: GBP_C; cd16269" /db_xref="CDD:293879" misc_feature 1815..1850 /gene="nonA" /note="coiled coil [structural motif]; Region: coiled coil" /db_xref="CDD:293879" misc_feature 1875..1907 /gene="nonA" /note="coiled coil [structural motif]; Region: coiled coil" /db_xref="CDD:293879" polyA_site 2619 /gene="nonA" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 aacactgatt tttttcttta caaagtaaaa ttttttaggg aaggctgaat tttcatctgg 61 caacactgat cattttttca ttacaaagta attctgagtg aaatatttgt gaataataaa 121 tcaattggaa aatggaaagt gctgctaaac tggataacac cgcgccgttg ccacagcgtc 181 agcagcagcg gggaaaccag cccaacaaaa acgtcggcaa gcataacgcc cagaagcaaa 241 gcgattccgc cgatgggagt ccggcggaga agaagccccg atttggaggt cccaatccaa 301 acgcccaaaa ccaaaatggt gctgtaacgg gcggcggtgc ccccaatcaa aataagaact 361 ttggaaacaa gggtggtttt gctgcgaacc gcaatcgcaa caatcagaat cagaatcgag 421 gaggaaatca taaccggacc tttccagccg ccaataacgt gaataagccc aataacgaaa 481 caccaaaggc ggtcgtcgtt aacgtagctg ctaagacaag tgaaccggca acagcagctg 541 caagtcaaag tcaaccgaat ccgaatgcta gcaagggcca aaatcaaaga caagggcaaa 601 accaaaacca aaaccaaaat caggtgcaag gtcaaggaca aggacaacaa ggaggcctag 661 gaaatcaagg aaatcatgga ggccaaggaa atgggccagg ctttagagga cgcaacgttg 721 gtaacaacca aagtgctagc ggtggcggag gacccctgaa ccagcagcgg gacaacagga 781 accggggtca acgacctggc ggtcctgggg gcatgaacag ctccaacatg ggcggcagcg 841 gcggcggagc cgggggtccg cgtggtggag aggacttttt catcggccag cgattgcgga 901 gcattgctgg ccccaccatt gaactagagc cggttgaagt accgaccgaa acgaaattct 961 ctggccgtaa tcgtctctat gtgggcaacc taaccggcga cattaccgac gatgagctgc 1021 gcgagatgtt caagccgtac ggagagatca gcgagatctt ctcgaacctt gacaagaact 1081 ttacattcct aaaggtcgac taccatccaa atgccgagaa ggccaagcgc gccctagacg 1141 gatcgatgcg aaagggacgc cagttgcgag ttcgttttgc ccccaatgcg accattttgc 1201 gcgtgagcaa tctcacgccg ttcgtgtcta acgaattgct gtacaagtcc ttcgaaattt 1261 ttggtcccat cgagagggcc agcattaccg tcgacgatcg tggcaagcat acaggcgaag 1321 gtattgtgga gtttgccaag aagtcgtccg ccagcgcctg cctgcgatta tgcaatgaga 1381 aatgtttttt cctgaccgcg tccctccgtc cgtgtcttgt ggatccgatg gaggtgaacg 1441 acgacaacga tggactgccg gagaaggcgt tcaataagaa gatgcccgac ttcaatcacg 1501 agcgcagcat tggtccacgc ttcgccgatc tcaactcctt tgagcacgag tacggatcgc 1561 ggtggaagca gctgcacaat ctattcaaaa ccaagcagga tgccctcaaa cgtgagctaa 1621 aaatggagga ggacaaattg gaggctcaga tggagtacgc tcgctatgag caggaaactg 1681 aacttttgcg tcaagagtta agaaagcgcg aagtggacaa cgagcgtaaa aaattggaat 1741 gggaaatgcg agagaaacag gccgaagaga tgcgaaagcg ggaggaggag acaatgcgac 1801 gccatcaggg cgaaatgcag agccacatga atcgtcagga ggaagacctt ctccgcaggc 1861 agcaggagaa cacattgttt atgcaggcgc agcaactaaa ttcgttgctt gatcagcagg 1921 aaggatttgg caacggtgga ggcggcggca acaacaactc cagtttcgac aacttcgggg 1981 gaaacagcaa ctcgccattt gaagttttca gaggcaataa caacagcaat tcgactatga 2041 ttggaaacaa ttctggtccc aatacacagg actccttcgc ttttgaattt ggggttaaca 2101 atatgaacca aggcggaaat caacgcggaa ataatggcgg aggaaataat gtcccatggg 2161 gacgtcgacg tttttagaca ctggagccaa acatatgagg atgaaatata acgtactctc 2221 tcacttattg attacgtttc acattttgac tttgctcctt cgagagtaaa caaaataatc 2281 gaacataaaa ggatcgtcta atcgaaagca cccaaatatg atttgatttt aaatttagtc 2341 aaatattatc aatcgctcct aataagaggc aactataaaa ccataacacg caaaggatga 2401 accttaaaaa atacacaatc ccaaaatgat tgcttaaaag tgcagtattg cgcaaacaaa 2461 aaaaaaaaac aaaaaatcat tacgtacatc tatttaatca taacgataag tttaaattat 2521 gtatgtatgt ggtgactaca ttctccagta aaatgattct ttttttatct atcattgaaa 2581 ttaaatatat actgatatat tactaatcga ttaactgaa