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LOCUS XM_017156209 6114 bp mRNA linear INV 09-DEC-2024 (sl), mRNA. ACCESSION XM_017156209 VERSION XM_017156209.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017156209.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6114 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..6114 /gene="sl" /note="small wing phospholipase C gamma 1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:108067254" CDS 312..4016 /gene="sl" /codon_start=1 /product="1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1" /protein_id="XP_017011698.1" /db_xref="GeneID:108067254" /translation="MSCFSAMSAPLLGEMEQTIGMLERGTIVTKLYGKQRRPDRRHLM LIRETRQVIWATVATQTPRTDYEGAIQLREIREIRVGKHSKEFRLFADDCQRFESSKC FVILHGSHFKLKSFSVVALSEIEADNWVRGLQYMVKDTLGAPYTLQIDRWLRREYYQI ENVNSHSAKATEQSPAQVTIKDFKLFLAGVSCKMTTGKFMEHFTEDVRRKHDLKFDDF SRLYQKLLLPNGFASNLSGSGSSGANFPYSEDQQVVRPAELKQFLESEQRDVSACEIS NAAIASFIRDFVQDVERDVQEPYLTFSEFVDFLFSKQNDLWNSKYDSVFMDMNLPLSS YWIASSHNTYLTGDQFSSESSCEAYARALRMGCRCIELDCWNGPDNLPYIFHGHTMTS KIKFMDVIKTIKDHAFTTSEYPVILSIEQNCSLEQQRNMAQALIEVFGDTLLSQPCDR NEQHLPSPYQLRRKIILKHKKLPQFDDISNGISGTGSLGHRSSLGGAGGGENDGENVR KVFKEGLLYFKDPVDKSWNLYQFVLTHQELIYSSEINETRNGNSEDDDFGLSSSCSLN SNMQQKQKDASANDELHFGENWFHGKLEGGRKEADDLLKQYKHFGDGTFLVRESATFV GDYSLSFWRRNRPNHCRIKLKHENGSIKYYLVENFVFDSLYSLIVYYRKNMLRSSEFS IILKEPVPQPKKHEDQEWFHPNTTKEQAEQGLYRLDIGSFLVRPSVQSINAFVISFTI NRKIKHCRIMQEGRLYGIDTMNFESLVSLINYYTRNPLYRNVKLSHPVSQELLRQALA ESAQGDHTGHDDNGASNYMGSNLEEYVTCKALYSYKANKPDELSFPKHAIITNVQRDN SMWWIGDYGGMIKKHLPANYVKVIDSATEDYNSLNEDGTDGRTDSIEIFGAVASLFES NDPGIIFKLQIQTPTMQNPFVIGFDNQETAYEWIKAIQEAALIASQLATERRKKERTA RVAKEMSDLIIYFRSVPFREHSWIFQEMSSFPETKAEKQFLQQNTQLFLSYHRNQISR VYPKGQRLDSSNFNPMPFWNIGSQMIALNYQTGDRAMQFNQAKFRNNGQCGYILKPAF MKSESFQPNNPLCDGFGGVKVTIRLIAARHLFRGGKSNNPQIVVEIVGASYDTGVKYR TKVNENGFNPVWNESCEFNVRNPQFAILRFEVQDEDMFAETHFIAQACYPLTCVRQGY RSVILRNKFSEELELSSLLINIKIANATSP" misc_feature 375..752 /gene="sl" /note="Phospholipase C-gamma (PLC-gamma) pleckstrin homology (PH) domain; Region: PH_PLC_gamma; cd13362" /db_xref="CDD:270168" misc_feature order(390..392,396..398,435..437,480..482,672..674) /gene="sl" /note="putative Rac1 binding site [polypeptide binding]; other site" /db_xref="CDD:270168" misc_feature order(399..401,405..407,426..428,432..434,438..440, 477..482) /gene="sl" /note="putative phosphoinositide binding site [chemical binding]; other site" /db_xref="CDD:270168" misc_feature 765..1250 /gene="sl" /note="EF-hand motif found in phosphoinositide phospholipase C gamma isozymes (PI-PLC-gamma); Region: EFh_PI-PLCgamma; cd16201" /db_xref="CDD:320031" misc_feature 765..884 /gene="sl" /note="EF-hand motif [structural motif]; Region: EF-hand motif" /db_xref="CDD:320031" misc_feature 903..989 /gene="sl" /note="EF-hand motif [structural motif]; Region: EF-hand motif" /db_xref="CDD:320031" misc_feature 999..1112 /gene="sl" /note="EF-hand motif [structural motif]; Region: EF-hand motif" /db_xref="CDD:320031" misc_feature 1146..1250 /gene="sl" /note="EF-hand motif [structural motif]; Region: EF-hand motif" /db_xref="CDD:320031" misc_feature 1284..>1748 /gene="sl" /note="Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma; Region: PI-PLCc_gamma; cd08592" /db_xref="CDD:176534" misc_feature order(1332..1334,1467..1469) /gene="sl" /note="catalytic site [active]" /db_xref="CDD:176534" misc_feature order(1335..1337,1422..1424,1428..1430,1569..1571) /gene="sl" /note="putative Ca binding site [ion binding]; other site" /db_xref="CDD:176534" misc_feature 2058..2354 /gene="sl" /note="N-terminal Src homology 2 (N-SH2) domain in Phospholipase C gamma; Region: SH2_N-SH2_PLC_gamma_like; cd10341" /db_xref="CDD:199829" misc_feature order(2100..2102,2163..2165,2169..2171,2193..2195, 2226..2228) /gene="sl" /note="phosphotyrosine binding pocket [polypeptide binding]; other site" /db_xref="CDD:199829" misc_feature order(2202..2204,2229..2231,2274..2276,2343..2345) /gene="sl" /note="hydrophobic binding pocket [polypeptide binding]; other site" /db_xref="CDD:199829" misc_feature 2394..2696 /gene="sl" /note="C-terminal Src homology 2 (C-SH2) domain in Phospholipase C gamma; Region: SH2_C-SH2_PLC_gamma_like; cd09932" /db_xref="CDD:198186" misc_feature order(2430..2432,2484..2486,2547..2549,2553..2555) /gene="sl" /note="phosphotyrosine binding pocket [polypeptide binding]; other site" /db_xref="CDD:198186" misc_feature order(2550..2552,2628..2630) /gene="sl" /note="hydrophobic binding pocket [polypeptide binding]; other site" /db_xref="CDD:198186" misc_feature 2787..2945 /gene="sl" /note="Src homology 3 domain of Phospholipase C (PLC) gamma; Region: SH3_PLCgamma; cd11825" /db_xref="CDD:212759" misc_feature order(2802..2804,2820..2822,2826..2831,2886..2888, 2922..2924,2934..2939) /gene="sl" /note="peptide ligand binding site [polypeptide binding]; other site" /db_xref="CDD:212759" misc_feature 3246..3578 /gene="sl" /note="Phospholipase C, catalytic domain (part); domain Y; Region: PLCYc; smart00149" /db_xref="CDD:128454" misc_feature 3630..3950 /gene="sl" /note="C2 domain present in Phosphoinositide-specific phospholipases C (PLC); Region: C2_PLC_like; cd00275" /db_xref="CDD:175974" misc_feature order(3690..3692,3762..3764,3849..3851,3855..3857, 3873..3875,3879..3881) /gene="sl" /note="Ca2+ binding pocket [ion binding]; other site" /db_xref="CDD:175974" polyA_site 6114 /gene="sl" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tcccagctct aagtcatatt agttccacct ctaaaccgta aaagtgctgg aaaggtattt 61 tttttgggta cattttataa atattgcata gttaaactcg gttctacggt ccacttcccg 121 tgatttgtgc gccaaccaag tggaagagag tggggcagtt gatctgcgaa gggataacgc 181 tggagcccac agtttgcatg cattgcactt agtttttggg tgattggttg gcgaggcgag 241 gaacaacctg tggcagccag cgacaggaaa cggcaggaca ggatttgacc ccattaaatc 301 cagattccag gatgagctgc tttagtgcga tgagtgcccc gctgctgggc gagatggagc 361 agaccatcgg tatgctggag cgcggaacca tcgtgaccaa gttgtatggg aagcagcgtc 421 gtccggatcg ccgccacctg atgctcatcc gtgagacgcg ccaggtgatc tgggccacgg 481 tcgccaccca aacgccacgc accgactacg agggcgccat acagctgcgg gagatccgtg 541 agatccgggt gggcaagcac tccaaggagt tcagactctt cgccgacgat tgccagcgct 601 tcgagtccag caaatgcttt gtcattctac acggcagtca cttcaagctg aagagcttct 661 cggtcgtggc gctgtcggag attgaggccg ataattgggt gcgggggctg cagtatatgg 721 tcaaggacac actgggagca ccctataccc tgcaaatcga tcgctggctg cggcgagagt 781 actaccaaat cgagaatgtc aactcgcatt cggccaaggc gacggaacag tcgccggcac 841 aggtgacgat caaggacttc aagctcttcc tggccggcgt tagctgcaag atgaccaccg 901 gcaagttcat ggagcacttc accgaggatg tgcggcgcaa gcacgacctg aagttcgacg 961 atttctcgcg actgtatcag aagctgctgc tgcccaacgg ctttgccagc aatctatcgg 1021 gttcaggatc tagcggggct aactttccat actcggagga ccagcaggtg gtacgaccgg 1081 cggagcttaa gcagttcctg gagtcggagc agcgcgatgt gagcgcctgt gagatcagta 1141 acgcagccat tgcctcgttt atacgggact ttgtgcagga tgtggagcgg gatgtccagg 1201 agccgtatct gaccttctcg gagttcgtgg actttctgtt ctccaagcag aacgacctgt 1261 ggaacagcaa gtacgactcg gtgtttatgg acatgaacct gccactgtcc tcctactgga 1321 tcgcctcgtc gcataatacc tacctaaccg gcgatcagtt ctccagcgaa tcctcctgcg 1381 aggcctacgc gcgcgccctt cgcatgggct gtcgctgcat cgagctggac tgttggaatg 1441 gcccggataa cctgccctac atcttccatg gccacacgat gacctccaag atcaagttca 1501 tggacgtcat caagacgatc aaggatcacg ccttcaccac ctccgagtat ccggtgatac 1561 tctccatcga gcagaactgc tccctggagc agcagcgaaa catggcgcag gccctgatcg 1621 aggtatttgg ggacacgctg ctttcgcaac cttgtgaccg aaacgagcaa cacttgccgt 1681 caccatacca gttgcgtcgc aagataatcc tcaagcacaa gaagttgccg cagttcgacg 1741 atatcagcaa tgggatttcc ggcaccggtt cgctgggcca tagatcttcg ctgggcggag 1801 cgggcggtgg ggagaacgat ggcgagaatg tgcgcaaggt gttcaaggag ggattgctgt 1861 actttaagga tccggtcgat aagtcctgga acctgtatca gttcgtcctg acccaccagg 1921 agctcatcta ctcatccgag atcaacgaga cgcgtaacgg aaactccgag gacgatgact 1981 ttggactatc ctcgtcgtgt tcgctgaaca gcaacatgca gcaaaaacag aaggatgcat 2041 cggccaacga cgagctgcac tttggcgaga attggttcca tgggaaactg gaaggtggca 2101 ggaaggaagc agacgatcta ctaaagcagt ataaacattt tggcgacgga acatttttgg 2161 tacgcgaatc agccactttt gtgggcgact atagtctctc tttttggcgc cgaaatcgac 2221 cgaatcactg tcgcattaag ctgaagcacg agaatggttc aatcaagtac tatttagtgg 2281 agaatttcgt gtttgactcc ctatactccc tgatcgttta ctatcgaaag aatatgctgc 2341 gaagctcgga gttttcgatt atactaaagg agcctgtgcc acagccaaaa aaacacgagg 2401 atcaggagtg gttccaccca aacaccacta aagagcaagc ggagcagggc ctatatagac 2461 tcgacatcgg ttcgtttctc gtcaggccgt cggtgcagag cattaacgcc ttcgtcattt 2521 cgtttacgat caaccggaag atcaagcact gccgcattat gcaggagggt cgtctgtacg 2581 gcatcgatac gatgaatttc gagtccctcg tctcgctgat caactactat acgcgaaatc 2641 cgctctatcg caatgtcaag ctcagccatc cggtttctca ggagctgctg cgtcaggcgc 2701 tggcggagag cgcccagggc gatcacactg gccacgacga caacggggca tccaattaca 2761 tgggctccaa tctggaggaa tatgtcacct gcaaggccct ctacagctac aaggcaaaca 2821 agccggacga actctcgttc cccaagcatg ccatcatcac aaacgtccag agggacaact 2881 cgatgtggtg gattggggac tacggtggaa tgataaagaa gcatctgccg gcaaattatg 2941 taaaggttat tgattctgct accgaggact acaactcgtt aaacgaggac ggaaccgatg 3001 ggcgcactga ctccatagag atattcggag ctgtggcctc gcttttcgag tccaacgacc 3061 cggggattat cttcaagctg cagatacaaa cgccaacgat gcagaatccg tttgtgatcg 3121 gctttgacaa ccaggagacg gcctacgagt ggataaaggc catccaggag gcggccctaa 3181 tcgccagcca actggccacg gagcgacgga aaaaggagcg cactgcccgg gtggccaagg 3241 agatgtccga cctgatcatc tacttccgca gcgtgccctt ccgcgagcac tcgtggatat 3301 tccaggaaat gtccagcttc cccgaaacaa aggcggaaaa gcaattcttg cagcagaaca 3361 cacagctatt tctctcctac catcgcaatc agattagtcg agtgtaccca aagggacagc 3421 gcttggattc gtcaaatttt aatccgatgc ctttctggaa tatcggatca cagatgatcg 3481 cactgaacta ccagacggga gacagggcca tgcagttcaa tcaggccaag ttccggaaca 3541 atggccaatg tggctatatc ctgaagccgg cattcatgaa gtcggaaagc ttccaaccca 3601 acaatcccct gtgcgatggt tttggcgggg tgaaagttac cattcgcctg atagccgcac 3661 gtcatctatt tcgtggcggc aaatcgaaca atccacagat cgtggtcgaa atagttggcg 3721 ccagttacga tacgggcgtc aagtatcgca ccaaagtcaa cgagaacgga ttcaatccgg 3781 tgtggaatga atcgtgcgag ttcaacgtgc gcaatccgca attcgcgatc cttcgctttg 3841 aggtccagga cgaggacatg ttcgccgaga cgcacttcat cgcccaggcg tgttatccgc 3901 tgacctgtgt tcgccagggc tatcgcagcg tcattttgcg aaataagttt agtgaagagc 3961 tggaattatc gtctttactg atcaacatca agatcgccaa tgccacttcc ccgtagtcgg 4021 attatatagt tggttggtgc actggaccgt agatgcgtta tgagtgcaag caatgattcc 4081 aagtctgcat gtatgtataa gtaaatggga aaaccaattg tttacctgaa agaatgcaaa 4141 gctagtattg ctccaccgtt ttattcaaac tatgatctga ttctccgact caaactagct 4201 ttaatgaaga taccgaaaac ttttgacgat ttcgattaaa ttctatacga atcagaagat 4261 atggtagcgc atactataca attagtgttc taataataat caaattcatg aaagtgggaa 4321 ctcccgaaac aaatttgact tttccatatt ttttggcgtc tactgaatca acgttcaatc 4381 aattggcctc tacatatact tatgattaat tttcgttcta tcatgagttc attgcagtat 4441 tcgtacatct actcttgttt accactatat tatgtgcaat ctgagcatct ttggatgggt 4501 cattgattca ggagaactaa aaattatggc taaaagagca caaagcgata tcgtaaaaca 4561 aaaaaaaaaa gtagtcaaaa tcgaaactga tttaattgtc atattcctgt ttttgctttc 4621 aaaagttttt cttgaattcg aaagtataat ttacttacac tttagcatcg aattcaaatg 4681 acatttgata ttaattttta aaattttgtt attattgaac accccttcat aagtgttaca 4741 ttgcaaactt aaaaaaaatg ttaatttaga gtataaggac aacgtttaaa actattacat 4801 aagcaggagg actcggatat cattcgcaag cgcctttcct aaacttcttt atataacttt 4861 tctttagcgc aaatactcag agagcatttc aaaaatgcgt ggaaaaatca aatcatcttc 4921 aaaaggaata atacaaaaag ttagaaatta ctacaaaaaa gtaaatcagt atctctagtt 4981 tacaagtgcc ttaaaaatca acgcttaccc aagatcaaaa atcgtatttc atttttaata 5041 aataatatga gtactagtgg agtcaaccta gttaaacgtt aactattgac tcagtcctgt 5101 gaatatatgt acatgtttta aactcatttt tgatcaattt tgattagtat tttgaacaaa 5161 taatcgaaac aaaactaaac taagggttcc tcgtgaacat gatttgatca aatcacgggt 5221 gtttacgatt ttcaaatttc tatgtataca atttcgcgct tgcctctcct aatctgcaag 5281 atctacaaat tctaaactaa cctaatagac tttatttttg ttaatgcatt ttgtaatcaa 5341 aatattaaag atcgataaac tacactagtc gatttaagga gggaaaaata aacgacctag 5401 aactaatatg ggtatcgaga gatatagcat ctgaaaacga tttgcattcc atttgaatgc 5461 ccgctagaat gatcgctaca actcctaagg ggctgtccat atattacgta atcacaattt 5521 cggcgacttt tgacccatgt aatcaattct ccatacaaaa aaaaaataat ttgcactaga 5581 gtaatcattt ggtggacccc ctcccccccc cctagatgat tacgtaatat atggacagcc 5641 cctaatagta tgtttagact tagactacta gaatcaattt cgaatattca aaaataatgc 5701 gaggcattag atgcagtctt aaaacattcg aatttaaaga aaactgacat aaaaattgag 5761 ctttacttat gtatttcgtc gcatgtcagt ctaaacacac tattatatat catttgtcat 5821 gcatttgcat ttaactatat gaacaacatt ctgcagcccc aacaccagaa catttcgcat 5881 catagatctg aattggacat tttcgctttt gagaattagc caatcgtttt tagtatatgt 5941 acccaaaatg tatttaagtt gtacgtttcg tctttaagtg tatctgtata tctaatagat 6001 attttcaact attttgtaaa tgccttatat acagcgaaca cacaaaatgt atacatgcat 6061 acattattta atgccaaata aaaatttacc ggcgttagct gtccatatat taaa