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PREDICTED: Drosophila takahashii AF4/FMR2 family member lilli


LOCUS       XM_017156122            2500 bp    mRNA    linear   INV 09-DEC-2024
            (LOC108067200), transcript variant X2, mRNA.
ACCESSION   XM_017156122
VERSION     XM_017156122.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017156122.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2500
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..2500
                     /gene="LOC108067200"
                     /note="AF4/FMR2 family member lilli; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:108067200"
     CDS             92..2500
                     /gene="LOC108067200"
                     /codon_start=1
                     /product="AF4/FMR2 family member lilli isoform X2"
                     /protein_id="XP_017011611.3"
                     /db_xref="GeneID:108067200"
                     /translation="MSAVPQARSRQHRHHHHHHKKHYTIHSNHLIQMGSIIFSQRQWC
                     ICLLIIMSTLCSAVSVTSGTSGNSRRRSGGTLGAGASSLEETDGKKIPDQLALAASRR
                     GSDERGYSRRGSVIHSRLKEADSKDYSYGQVELNLVRPEQESHPKLILSTTTAASGSG
                     ATGVNLEDSQSAAEYVANAIKLAYNQPPVQIQLKNPNQNLNQNQNHKKLQVSTQRSYQ
                     EQRRDKDRELQELQRQKELEQQGLILGSGPSSPSSLGSESSLPPSSPSLAPAPVYEKE
                     PVTRSYELYEPSTEGESNVHIQGPEPDIERHFRPKYNNYNNNYAQYQPPQIYRNLEAE
                     AEEKVRVSASTEIPKSEIMKQIEKSVIKYMKELEAEGKILSTLQEPATPPAPPHPPPP
                     PSIAKTTYYKSQPLLSSGGIHHSGTITSTHSEEKRYSSSTVRPKFTAPPTTTKQQQLH
                     HHHQQQVHHHPQHHHTHQIGGKLRSSTLASKPLQHFQSETETAYQAPDLPVDELSPNV
                     EFIYKIKTRAPLQTATVKTVSKPYTLPLKSADHFDHGAALKNIEEFDLSHVVPTPDRV
                     ERERERERERERERDSREDQGRLSNSGKAHKLYFNSEIYHDINSLPYKSKEAAALQEY
                     RSKLKASGSPSSGELHPDYKGYAPGYFAEPEAEVENDSKVILNEEGGYPYHYVLKKET
                     LLDDHDPWLEQQPLRLAHAHAHTHSHAHNPNKHSSLEYDSYSPKFNNNPEGYGYQHTY
                     KVRGQAGAVGVLGGVATGAGAGGKRGKRGGGAHPRQEAIKKQLRASEAKDLEASLALR
                     PPPK"
ORIGIN      
        1 aattttccgc tgcagcggtc cgcatcatta taaaagcctc gcctcgccag ctggccgcta
       61 acaatcccag ctgagactcc gtcgcgccac aatgtcagcg gtgccacaag cacgatcccg
      121 tcagcatcgt catcatcatc atcatcataa gaagcactac acgatccatt cgaaccacct
      181 catccaaatg ggatcaatca tctttagcca acggcagtgg tgcatatgcc tgctgattat
      241 catgtcgacg ctttgcagtg ctgtttcagt aacctcaggc acatcgggaa acagtcgccg
      301 ccgatcagga ggaaccctag gagcaggtgc atcctcactt gaggagactg atggcaagaa
      361 aattccagat cagctagctt tggcagccag tcgtcgcggg tcagatgaac gtggttactc
      421 caggcgagga tcggtgatac acagcagatt aaaggaggcg gacagcaaag attatagcta
      481 cggccaggtg gaactaaatc tcgtccgccc cgagcaagaa tcgcatccga aactcatact
      541 gagcaccacg accgcagcat ccggatcggg ggcgaccgga gtcaatcttg aggattccca
      601 atccgcagcc gagtacgtgg ccaatgccat caagttggcc tacaatcagc caccggtaca
      661 gattcagctc aagaatccga accagaatct gaaccaaaac cagaaccata agaagctgca
      721 ggtttccacg cagaggagtt accaagagca gcggagggat aaggataggg agctccagga
      781 actgcaaagg caaaaggaac ttgaacagca gggattgatc ctaggctcag gaccctcgtc
      841 tccatcctcc ttgggatcgg aatcctcttt accaccctca tcgccctctt tagcaccagc
      901 tcctgtgtac gaaaaggaac ccgtcacacg gagctatgaa ctctatgaac cctccaccga
      961 aggggaatcc aatgtccata tccagggacc agagccagac atcgaacgtc acttccgtcc
     1021 caaatataac aactacaaca acaactatgc ccaatatcag ccaccgcaaa tctacagaaa
     1081 tctcgaagcc gaggccgagg aaaaagtcag ggtatcggcc tcaacggaaa ttcctaaatc
     1141 ggagattatg aaacagattg aaaagagtgt gattaagtat atgaaggaat tggaggcaga
     1201 gggtaaaatc ctaagtaccc ttcaagagcc ggccacgccc ccggcaccac cacatccgcc
     1261 accgccgccc tcaatcgcca agaccaccta ctataaatcg cagccactgc tttcatctgg
     1321 tggtatccac cattccggaa ctataacctc tacccattcg gaggaaaaac gctacagcag
     1381 cagcacagtg cggcccaaat ttacggcacc accaacgacg acgaagcaac agcagttgca
     1441 tcaccatcat cagcagcagg tgcaccacca cccacagcac caccacaccc accaaatagg
     1501 tggaaaatta aggagttcca cgttggcttc aaagcccctt cagcactttc aatcggaaac
     1561 ggaaacagcc tatcaggcac ctgatttacc cgtagacgaa ctgagtccca atgtggagtt
     1621 tatctacaag atcaagactc gggctcccct gcaaactgcc acagtgaaaa ccgtctcaaa
     1681 accctatact ctacccctca agagcgccga tcattttgat catggtgcgg ccttaaaaaa
     1741 tatcgaagaa ttcgatttat ctcacgtagt acccactcca gatcgggtgg aaagggaaag
     1801 agaaagagaa agagaaaggg agagggaacg tgattcacgg gaggatcagg gccgacttag
     1861 caactctggt aaagcccaca agttgtattt caattcggaa atctatcacg acataaattc
     1921 attgccctac aaaagcaaag aggcagctgc tttgcaggaa tatcgaagca agctcaaggc
     1981 aagcgggagc ccatcatctg gagaactgca tccagattac aagggctatg cacccggtta
     2041 ctttgccgaa ccggaagcag aggtggaaaa tgattccaag gtcattctga atgaagaggg
     2101 aggctatccc tatcattatg tgctgaaaaa ggaaactctt ttggatgatc atgatccatg
     2161 gttggagcaa cagcctctgc gcctcgccca cgcccacgcc cacacgcaca gccacgccca
     2221 caaccccaac aagcattcga gtctcgaata cgatagctac agtccgaaat ttaataacaa
     2281 tcctgagggt tacggctatc agcataccta caaggtcaga ggtcaggcgg gagccgtggg
     2341 cgttttaggt ggagtggcta caggtgctgg ggctggtgga aagcgcggaa aacggggggg
     2401 cggtgctcat cccagacaag aggcgatcaa gaagcaactg cgggcatcgg aggcaaagga
     2461 tttggaagcc agtttggccc tgaggccacc gcccaaatag