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LOCUS XM_017155765 1810 bp mRNA linear INV 09-DEC-2024 (LOC108066957), mRNA. ACCESSION XM_017155765 VERSION XM_017155765.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017155765.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1810 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..1810 /gene="LOC108066957" /note="transcription factor grauzone; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108066957" CDS 30..1652 /gene="LOC108066957" /codon_start=1 /product="transcription factor grauzone" /protein_id="XP_017011254.2" /db_xref="GeneID:108066957" /translation="MICRLCLDNAEHSVPIFDQEEQQQEEAPSHLAELIEKHLQLVLL PNDAVSKCLCTQCWQQLADFEQFCAMVMKKQLGLQQLKMEPFSEDDEDADTKAQILCE PEIDVSPAPADNEECNEIDGDASSKSSRSSSRMPSPIRRTMRPRAAAAPKSRVAKAKA KTKRHQEEADEDEEAEGDPESRSTNSREMDSYIALHGRLECCLCGGSDDDQFQSFAEM KRHFRSHHQSAGYVVCCQRRYKKRALYVDHLRMHNDPDYFRCKICAKQLVSRISYDVH MLRFHSNEDELSFACNQCSKRFSKQFLLTIHSRVHQQERKEQCKHCDRSFRTAVDLRL HMRRTHDPAFVPFICDACGAKFKTKQNLLVHKRTVHREGSQLPEVQCQECQVWLSDEN SLRKHMYMHLDAASLRQWKCEQCGLEKGSRAKLAAHIRYHHPKEYHKCTHCGKEFKSS RGLEEHTATHTGQDLYECAFCERTFKNSGNMHKHRRQMHAAQVAALQQQKKVRPSRRK DKGDLLLDVLAAGGKELNHAMGGAVGVGDMND" misc_feature 33..272 /gene="LOC108066957" /note="Zinc-finger associated domain (zf-AD); Region: zf-AD; pfam07776" /db_xref="CDD:462262" misc_feature 732..785 /gene="LOC108066957" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 807..872 /gene="LOC108066957" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 900..962 /gene="LOC108066957" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature order(915..917,921..923,927..929,933..938,945..950, 957..959,999..1001,1005..1007,1017..1022,1029..1034, 1044..1046,1089..1091,1095..1097,1101..1103,1107..1112, 1119..1124,1131..1133) /gene="LOC108066957" /note="putative nucleic acid binding site [nucleotide binding]; other site" /db_xref="CDD:275368" misc_feature 984..>1166 /gene="LOC108066957" /note="N-terminal domain of Oryza sativa transcription factor SUPPRESSOR OF FRI 4 (OsSUF4), Arabidopsis thaliana SUF4 (AtSUF4), and similar proteins; Region: SUF4-like; cd20908" /db_xref="CDD:411020" misc_feature 984..1049 /gene="LOC108066957" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:411020" misc_feature 984..1049 /gene="LOC108066957" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature order(999..1001,1017..1019,1038..1040,1044..1046, 1071..1073,1092..1094) /gene="LOC108066957" /note="putative DNA binding site [nucleotide binding]; other site" /db_xref="CDD:411020" misc_feature 1074..1139 /gene="LOC108066957" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:411020" misc_feature 1074..1133 /gene="LOC108066957" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 1170..1232 /gene="LOC108066957" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 1263..1325 /gene="LOC108066957" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature order(1278..1280,1284..1286,1290..1292,1296..1301, 1308..1313,1320..1322,1362..1364,1368..1370,1380..1385, 1392..1397,1404..1406,1446..1448,1452..1454,1458..1460, 1464..1469,1476..1481) /gene="LOC108066957" /note="putative nucleic acid binding site [nucleotide binding]; other site" /db_xref="CDD:275368" misc_feature 1347..1409 /gene="LOC108066957" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 1431..1487 /gene="LOC108066957" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" ORIGIN 1 tctggcaacg ccacgtgtgc cgtcgcgcaa tgatatgtcg cctctgcctg gacaatgcgg 61 agcacagcgt gccgatcttc gaccaggagg agcagcagca ggaggaggcg ccctcccatc 121 tggctgagct aattgaaaag cacctgcagt tggtgctcct gcccaacgac gcggtgtcca 181 agtgcctgtg cacccagtgc tggcagcagc tggccgactt cgagcagttc tgcgccatgg 241 tgatgaagaa gcagctgggc ctgcagcagc tgaaaatgga gcctttttcg gaggacgacg 301 aggatgcgga caccaaggcg cagatcctgt gcgagccgga gatcgatgtg agtcccgcgc 361 cggcggacaa cgaggagtgc aacgagatcg atggcgatgc gagcagcaag agcagcagga 421 gcagcagcag gatgccctcg cccatcaggc gaacaatgcg accaagggcg gcggcagcac 481 ccaaaagccg ggtggccaag gcgaaggcca agacgaagcg ccaccaggag gaagcggacg 541 aggatgagga ggcggagggt gacccagaaa gccgtagcac caatagccgc gaaatggaca 601 gctacatcgc gctgcatggc cgcctggagt gctgcctgtg cggcggcagc gacgacgatc 661 agttccagag cttcgccgag atgaagcgtc acttccgcag ccatcaccag tccgccggct 721 atgtggtctg ctgccagcgg cgctacaaga agcgcgccct ctacgtcgac cacctgcgca 781 tgcacaacga tcccgattac tttcgttgca agatctgcgc caagcagctg gtcagccgca 841 tcagctacga cgtgcacatg ctgcgcttcc actccaacga ggacgagctg agcttcgcct 901 gcaatcagtg ctcgaagcgc ttctccaagc agttcctgct caccattcac tcgcgggtgc 961 atcagcagga gcggaaggag cagtgcaagc attgcgatag atcctttcgc accgccgtcg 1021 atctgcggct gcacatgcga cgcacccacg accccgcctt cgtgcccttc atctgcgacg 1081 cctgcggcgc caagttcaag acgaagcaga atctgctcgt ccacaagcgc accgtccacc 1141 gcgagggctc ccagctgccg gaggtgcagt gccaggagtg ccaggtgtgg ctctccgacg 1201 agaacagtct gcgcaagcac atgtacatgc atctggacgc cgcctcgctg cgccagtgga 1261 agtgcgagca gtgtggtctg gagaagggct cgcgggcgaa gctggccgcg cacatacgct 1321 accatcatcc gaaggagtat cacaagtgca cgcactgcgg caaggagttc aagagcagtc 1381 ggggattgga ggagcacacg gccacccata cgggacagga tctgtacgag tgcgccttct 1441 gcgagcgcac gttcaagaac tcgggcaaca tgcacaagca ccgcaggcag atgcacgccg 1501 cccaggtggc cgccctgcag cagcagaaga aggtgcggcc cagcaggcgc aaggacaagg 1561 gcgatctgct cctggacgtc ctggccgccg ggggaaagga actgaatcac gccatgggcg 1621 gggcagtagg agtgggcgac atgaacgact gatcgattcc aagggccaaa taaacacaca 1681 ttggaattaa gtaatagcta gtgtcttttt attctgtttt aattgagttt atttgaaggt 1741 taagttaggc ttaaagtttt tatgaaaaat atagttttgc tttagagaaa taattaagaa 1801 aatgttaaca