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LOCUS XM_017155759 1739 bp mRNA linear INV 09-DEC-2024 mRNA. ACCESSION XM_017155759 VERSION XM_017155759.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017155759.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1739 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..1739 /gene="betaTub65B" /note="beta-Tubulin at 65B; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins" /db_xref="GeneID:108066952" CDS 193..1572 /gene="betaTub65B" /codon_start=1 /product="beta-Tubulin at 65B" /protein_id="XP_017011248.2" /db_xref="GeneID:108066952" /translation="MREIVTLQIGGAGNAIGDSFWHVISHEHGVDYASGRFGGTSPLQ LERINVFFNATASKRFYARSILIDTEASTIQRLNASSQLYRPENFVAGTESAGNNFAR GYHTDGAAILEQVLDSTRREVESVDSLQGFQLLHSIGGGTGSGLTSLIMEALVEQYPD NLLCNYVTIPSPNMSQVVVEPYNALLSTPALVNNSHLTFCLDNEALFQICNRNLKIKM SGYEHINHIVALTMSGITTCLRFPGQLNAGLRKIYVNMVPFPRLHFLIPGFAPLVTCK QQQFSKGTVSELVQQIFSSNNLLCAIDLRQGKLLTAAGIFRGRMSPREVDQLMTGVRN KNINNFVDWIPNNIKTAICDIPPRGLKMSATFIGNTTAIQSLFQRLLDGSMAMLRRKA HLHWYTGEGMEEQEFQDAQQELQAIIDDYRSSAEGEDSGGAGRNGTAEDDSDEDATAA GPKCPYCTD" misc_feature 196..1467 /gene="betaTub65B" /note="The beta-tubulin family; Region: beta_tubulin; cd02187" /db_xref="CDD:276956" misc_feature order(196..198,580..582,922..930,940..942,955..957, 961..969,1153..1161,1168..1170,1228..1242) /gene="betaTub65B" /note="beta/alpha domain interface [polypeptide binding]; other site" /db_xref="CDD:276956" misc_feature order(220..228,235..237,601..603,607..621,730..732, 799..801,853..855,865..867) /gene="betaTub65B" /note="nucleotide binding site [chemical binding]; other site" /db_xref="CDD:276956" misc_feature order(256..261,268..273,832..834,859..861,868..873, 889..891,997..999,1003..1011,1261..1269) /gene="betaTub65B" /note="Taxol binding site [chemical binding]; other site" /db_xref="CDD:276956" misc_feature order(403..408,481..489,496..498,724..726,730..732, 853..855) /gene="betaTub65B" /note="alpha/beta domain interface [polypeptide binding]; other site" /db_xref="CDD:276956" polyA_site 1739 /gene="betaTub65B" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 aaaacaaaaa ttcaatgatt cacttagggc tcaagtataa gtctaaaata tttttttaag 61 ctaccctagg tctctcaaaa attgtatgaa aatattaaca agacggccag gagtcagctc 121 tccactagaa aaataagaaa agcagaggat gaggcagtag tagtttcgag gagcgcagga 181 gattgggtca gcatgcggga gatagtcacc ctgcagatcg gcggagcggg caatgccatt 241 ggcgattcgt tctggcacgt catctcgcac gaacatggcg tggattatgc ctcgggaaga 301 ttcgggggca ccagcccttt gcaactggag cggattaatg tattcttcaa tgcgacggcc 361 agcaaaaggt tctatgcccg ctccatactc atcgatacgg aggcgagcac aatacagcgt 421 ttgaatgcca gcagtcagct ttacaggccg gagaattttg tggcgggaac ggagagtgct 481 gggaataatt ttgcccgcgg ctatcacacc gatggagcag ctatcctgga gcaagtgctg 541 gatagcacgc gacgggaggt ggaatcggtg gactcgctgc agggctttca gctcctccac 601 tcgattggcg gcggcacggg ctccggtttg acttcgctga ttatggaggc tctggtggag 661 cagtatccgg ataatttgct atgcaattat gtgaccattc catcgcccaa tatgtcccaa 721 gtggtagtgg aaccctataa tgccttgttg agcacccctg ccctggtgaa caactcgcat 781 ttgacgttct gcttggacaa cgaggccttg tttcagatct gcaataggaa tctgaagatt 841 aagatgtccg gctatgagca tattaatcat attgtggcct tgaccatgtc tgggattacc 901 acctgcttga gattcccagg tcaactaaat gccgggctgc gcaagatcta tgtgaatatg 961 gttccctttc cgaggttgca tttcctcatt cccggctttg caccgctggt cacctgcaag 1021 cagcagcagt tcagcaaggg caccgtttcg gagctcgtcc agcagatctt ctcgagcaat 1081 aatctcctgt gtgccattga tttaaggcag ggtaaattac tcacagctgc tggaattttc 1141 cgtggcagaa tgtcgccgcg ggaggtggat caactgatga ctggggtgag gaacaagaat 1201 atcaataatt tcgtcgattg gataccgaat aatatcaaga ctgccatttg tgatattcca 1261 ccgaggggtt tgaaaatgtc ggccactttt ataggcaaca cgacggcaat tcagtcgctt 1321 tttcagcgtc tgctcgacgg atccatggcc atgttgcggc gcaaggccca tttgcattgg 1381 tacaccggcg agggaatgga ggagcaggag ttccaggatg cccagcagga gctgcaggcc 1441 atcatcgatg attatcgcag cagtgccgag ggtgaggatt caggaggagc tggccgaaat 1501 ggaaccgccg aggatgacag cgatgaggat gccaccgccg ccggtcccaa gtgtccttac 1561 tgcaccgatt aaactcagta attaaccctc ctcatcacac gaaaaaagat tcaaggactc 1621 cggtaaaaat tccaaagtgt cctcctttgt cgttgcgcgt ctgggattcg gattcataca 1681 tacttctgcc attgatattt cgatttcgat taggaaaata tatatatttt agatagtaa