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LOCUS XM_017155754 2091 bp mRNA linear INV 09-DEC-2024 (LOC108066949), mRNA. ACCESSION XM_017155754 VERSION XM_017155754.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017155754.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2091 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2091 /gene="LOC108066949" /note="transcription factor grauzone; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108066949" CDS 110..2044 /gene="LOC108066949" /codon_start=1 /product="transcription factor grauzone" /protein_id="XP_017011243.2" /db_xref="GeneID:108066949" /translation="MICRLCLEDAEHGVPIFDPDPTAAQPALRRLAELIERHLQLVLA ANDAVSTCLCNRCCRQLTEIELFCSMVADKQRSLHRSLQLKTELPELPEPALVVWNTE SPIEPKLSYEGDDIKDHILCEPVIDALSAGDEKDSEYGDTFEPEMQLEDENEDEDDEE EPQLDPVRPRPRGRPRKTPLQPHQIIKRKYEKRKQQNKELSLRESRARLREIKREEEE DDEEEEEEEDEAASPSPDEQPKPRGKRGRPKTKKLVTADDDSEAPVKRSSIKEMDDYI AANVKLDCAICAAPLEDFNDLKRHFRVEHDCTGYVKCCNNRYKKRTLYVDHLHCHKDP QYFSCQSCRKNFLNRNSQVMHMLRFHSQQQELVHQCAICEARFAKKFLLTMHLKGHKG TERPEVCDTCGKTFRTKFELSAHVKRMHAADFTPIICDICGTHFRSKANFLIHKKALH PDGPVAEVQCTLCGRWLRDERSLRKHLARHDDRDGDTKYRCLLCNAEKSSRAALSSHM RYHHSAKRHKCSLCDKEFKLPRALAEHMATHTGIDLYQCQFCTRTFKSHANMHNHKKK MHPNDWVRKYSQPSSSMTSTAAPPLAAPPVAAPPPPQPQLATPMLPPLGGMDSKSLIE IPDPEGFDFVSNSSVCPTPD" misc_feature 113..352 /gene="LOC108066949" /note="Zinc-finger associated domain (zf-AD); Region: zf-AD; pfam07776" /db_xref="CDD:462262" misc_feature 1124..1189 /gene="LOC108066949" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature order(1139..1141,1145..1147,1151..1153,1157..1162, 1169..1174,1184..1186,1232..1234,1238..1240,1250..1255, 1262..1267,1274..1276,1319..1321,1325..1327,1331..1333, 1337..1342,1349..1354,1364..1366) /gene="LOC108066949" /note="putative nucleic acid binding site [nucleotide binding]; other site" /db_xref="CDD:275368" misc_feature 1217..1279 /gene="LOC108066949" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 1304..1369 /gene="LOC108066949" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 1394..1450 /gene="LOC108066949" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 1487..1549 /gene="LOC108066949" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 1580..1642 /gene="LOC108066949" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature order(1595..1597,1601..1603,1607..1609,1613..1618, 1625..1630,1637..1639,1679..1681,1685..1687,1697..1702, 1709..1714,1721..1723,1763..1765,1769..1771,1775..1777, 1781..1786,1793..1798) /gene="LOC108066949" /note="putative nucleic acid binding site [nucleotide binding]; other site" /db_xref="CDD:275368" misc_feature 1616..1690 /gene="LOC108066949" /note="Zinc-finger double domain; Region: zf-H2C2_2; pfam13465" /db_xref="CDD:463886" misc_feature 1664..1726 /gene="LOC108066949" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 1748..1804 /gene="LOC108066949" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" ORIGIN 1 ccggcaacgc cctggacaac aactcttcaa aaaaaaaact caaaaacagc tgcatttaat 61 ttaacccgat tcgatttgcg atttttgtcc tttggtgtcc ttttatgaga tgatatgccg 121 actctgcctg gaggatgctg agcacggggt gcccattttc gacccggacc ccacggcggc 181 gcaaccggcg ctgcgccggc tggcggagct gatcgagcga catctgcagc tggtgctggc 241 ggccaacgat gcggtgtcca cgtgcctgtg caaccgctgc tgtcggcagc tgaccgagat 301 cgagctcttc tgctccatgg tggccgacaa gcagcgttcg ctgcaccgct cgctgcagct 361 gaagacggag ctcccggagc ttccagagcc cgctttggtt gtctggaaca cggagtcgcc 421 catcgagccg aagctgagct acgagggcga cgacatcaag gatcatatac tatgcgagcc 481 agtaatcgac gctctgtcgg cgggcgatga gaaggatagc gagtatgggg acaccttcga 541 gccggaaatg cagctggagg atgagaatga ggatgaggat gatgaggagg agccccagct 601 ggacccggtg aggccgagac ccaggggcag gccgcgcaag acgccactgc agcctcatca 661 gatcatcaaa aggaagtacg agaagcgcaa gcagcagaac aaggagctct ctttaaggga 721 atcgcgggcc aggctgaggg agattaagcg cgaggaggag gaggatgatg aggaggagga 781 ggaggaggaa gatgaggcgg catcgccatc ccccgacgag cagccaaagc cgcgcggcaa 841 acgcggccgt cccaagacca agaaacttgt aaccgccgac gacgacagcg aggcgcccgt 901 gaagcgcagc agcatcaagg agatggacga ctatatagcc gccaatgtga agctggactg 961 cgccatttgc gccgctccct tggaggattt caacgatctc aagcgccact ttcgcgtgga 1021 gcacgactgc actggttatg tgaagtgctg caataatcgg tacaagaagc gcacgctgta 1081 tgtcgatcat ctgcactgcc acaaggatcc gcagtacttc agttgccaga gctgccgcaa 1141 gaatttcctc aatcgcaaca gccaggtgat gcacatgctg cgcttccatt cgcagcagca 1201 ggagctcgtc catcagtgcg ccatctgcga ggcgcgcttc gccaagaagt tcctgctgac 1261 gatgcatttg aagggccaca agggcaccga gcggcccgag gtgtgcgaca cctgcggcaa 1321 gacattccgc accaaattcg agctgagcgc ccatgttaag cgcatgcatg cggccgactt 1381 tacgcccatc atttgcgaca tctgcggcac gcatttccgc agcaaggcga actttctcat 1441 ccacaagaag gccctgcatc ccgatgggcc cgtggcggag gtgcagtgta ccctgtgcgg 1501 ccgctggctg cgggacgagc gtagcctgcg caagcatctg gcgcgccacg atgaccgcga 1561 cggcgacacc aagtaccgat gcctgctctg caatgcagag aagtcatccc gtgccgcact 1621 cagcagccac atgcggtacc atcactccgc caagcggcac aagtgcagtc tctgcgacaa 1681 ggagttcaag ttgccaaggg cgttggcaga gcacatggcc acccacacgg gcatcgattt 1741 gtatcagtgc cagttctgca cgcgcacctt taagtcgcac gccaacatgc acaaccacaa 1801 gaagaagatg catcccaacg actgggtgcg caagtactcg cagcccagca gcagcatgac 1861 ctccacggcg gctcctccgc ttgcagctcc tccggttgca gctcctcctc cacctcagcc 1921 tcaattagct actcccatgc tgccgccgct gggcgggatg gacagcaagt ccctcatcga 1981 gatacccgat cccgagggct tcgactttgt cagcaacagc tccgtgtgtc ccacgcccga 2041 ctgaatctgc ttgtttttgt gtgtgtaagg aatcggattg gatttcgatg g