PREDICTED: Drosophila takahashii sulfiredoxin (Srx), transcript

LOCUS       XM_017155740             546 bp    mRNA    linear   INV 09-DEC-2024
            variant X1, mRNA.
ACCESSION   XM_017155740
VERSION     XM_017155740.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017155740.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..546
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..546
                     /gene="Srx"
                     /note="sulfiredoxin; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 2 Proteins"
                     /db_xref="GeneID:108066939"
     CDS             36..479
                     /gene="Srx"
                     /codon_start=1
                     /product="sulfiredoxin isoform X1"
                     /protein_id="XP_017011229.2"
                     /db_xref="GeneID:108066939"
                     /translation="MEFISQFIRLASRRGNGFGPILQRNRSSIVQKDSTMDTTIHSAG
                     IAEIHMVPMSVIQRPIPSVLDEKKVQSLMETIKGESSEDEVPPIDLLWITGDEGGDYY
                     FSFGGCHRFEAYKRLQRPEIKAKLVKSTLGDLYHYMGSSAPKYLA"
     misc_feature    177..452
                     /gene="Srx"
                     /note="Sulfiredoxin reactivates peroxiredoxins after
                     oxidative inactivation; Region: Srx; cd16395"
                     /db_xref="CDD:319253"
     misc_feature    order(180..191,204..218,300..302,306..311,333..341,
                     348..353,402..404,411..416,429..431,438..443)
                     /gene="Srx"
                     /note="peroxiredoxin binding site [polypeptide binding];
                     other site"
                     /db_xref="CDD:319253"
     misc_feature    order(237..239,246..251,258..260,285..287,291..293,
                     351..365)
                     /gene="Srx"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:319253"
     polyA_site      546
                     /gene="Srx"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gtttcaacgg cgcagaaatc gttcaattgg ccgccatgga gttcattagc cagttcatac
       61 gactggcgag cagacgcggc aacggattcg gtccaatcct gcagagaaat cggagcagca
      121 tcgtccaaaa agacagcacc atggacacca ccatccactc agcgggcata gccgagatcc
      181 acatggttcc catgagcgtc attcagaggc ccataccctc cgttcttgac gagaagaagg
      241 tgcaatccct gatggaaacc attaagggcg aaagcagcga ggacgaggtg ccccccatcg
      301 atctgctgtg gatcacgggc gacgagggcg gcgactacta cttcagcttc ggcggatgcc
      361 accggttcga ggcctacaag cgtctgcagc ggccggagat caaggcgaag ctggtgaagt
      421 ccaccttggg ggatctgtac cactacatgg gctccagtgc acccaagtac ctggcctgat
      481 ttatgttata tatatatgtg tgtattttag aaatgcattt ctcgttgact tatttttgat
      541 aagaaa