Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_017155721 1427 bp mRNA linear INV 09-DEC-2024 transcript variant X1, mRNA. ACCESSION XM_017155721 VERSION XM_017155721.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017155721.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1427 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..1427 /gene="Pa1" /note="PTIP associated 1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108066928" CDS 88..462 /gene="Pa1" /codon_start=1 /product="uncharacterized protein Pa1" /protein_id="XP_017011210.1" /db_xref="GeneID:108066928" /translation="MATDVEPAANTADKFSANAEELEGYYLQLDAGGIPELQWQFPGR RAPSPEASGGSGGNSKELEPLNDAIEQEPQKANDFDFSDEVAPTQMRVRSQTSTPKSA KKKTANFAGVMETLKKKNAESS" misc_feature 139..441 /gene="Pa1" /note="PAXIP1-associated-protein-1 C term PTIP binding protein; Region: PAXIP1_C; pfam15364" /db_xref="CDD:464674" polyA_site 1427 /gene="Pa1" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tgcccataaa tcgtatacaa aaaccaagaa attccctaaa actgtaacaa attaaggatt 61 taattaaact tatagactaa atccgcgatg gcaaccgacg tggagccggc ggcgaacacg 121 gcggacaagt tttcggctaa tgccgaggag ctggagggct actatcttca actggacgcg 181 ggcggcattc cggagctcca gtggcaattc ccgggacgca gggctccctc gccggaggct 241 tcgggcggat cgggtggcaa cagcaaggag ctggagcccc tgaacgatgc catcgaacag 301 gaaccccaga aggccaacga cttcgacttc agcgacgagg tggcccccac ccagatgcgc 361 gtccgcagcc agacctccac gcccaagtcg gccaagaaga agacggccaa cttcgcgggc 421 gtcatggaga cgctgaagaa gaagaacgcc gagagctcct agcacccgcc aaagttttga 481 tctagatcca gggatctagc ctaagatcag ttctttaagt ctagaatcct aggatcactc 541 tacaaaagaa tggaagtctt ccaaggaata ccacaagttt ggcagccagg aatgctacta 601 ttcgtataac attttgatct agcctaagat cacacttact aacttagtaa atcgtagtta 661 aaatccctgg caaacccatt aaaattatac tacaccacat atacctaaga caaacaagaa 721 atgttttagt atttaaggat cggaccggtt ggagatccct cttgggatca ctccacatta 781 aattaagaat atcccaagag atccccgaag tttggtagca aagaagagct tgccaccttt 841 caaaatttaa aggaagtttt aatctctgat tttccaaacg atttcaaggt taaaacccca 901 cattaaattt aacaaagggc ctagaaaatg gtcctaaact agtagaagca caatataaat 961 cgataaaacg tagacaaaca cagtaaagat acactactta ctccttatat acttaagata 1021 taagacttat acttaagtta ggcttgtagg aactttaatt ttaaacttta atagttcagt 1081 tttccattag aaagcaagtt ctgtgtaact tgtaagcgag acagcctgtt ctttagaatt 1141 aagagtagtt taagtagtcc taagaagttt caaatactct ttagtatata agcacctatt 1201 tttaagagta gcttgtagtt aggacatata tttctgtttc actttatatt taagttctta 1261 ccttttcgcc aatggcaata ttctccgtaa tattgcctaa aaaccgccgt ttgaagaata 1321 gcccattaag aatatactga actcgatggt agttcatagc tattaggtat aggtaagata 1381 ggctaaaatc tgtatatata acgaataaaa actgaatttc acaaaaa