Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_017155716 2960 bp mRNA linear INV 09-DEC-2024 16F (RhoGAP16F), transcript variant X3, mRNA. ACCESSION XM_017155716 VERSION XM_017155716.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017155716.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2960 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2960 /gene="RhoGAP16F" /note="Rho GTPase activating protein at 16F; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins" /db_xref="GeneID:108066925" CDS 1078..2502 /gene="RhoGAP16F" /codon_start=1 /product="rho GTPase-activating protein 15" /protein_id="XP_017011205.2" /db_xref="GeneID:108066925" /translation="MQTTTSQRPVTPGTPDSAHIVIGAAGFVAHERRQTGKSLMNCFR DRSTTTSSSTSQQQRGHSSLFRLEGNGGGGGSNCQLDRDSGRPEAVVLLRELKSKPNK LALLKSSSSRDLTRLYLDDATNTAVLVSNTSLDVCSSNSSSAGSPGRSTKSRTECCSS CSRRWHELKQRMHTLEQDLLVQTTYGQELEQKVGEMSRQLNELLQERDRDKEKPRSLG LAGKRAYPPAAGSPNVRPSRLVAWMNLSNWFKSRPSVETLREQRIFFDEPCFDTELEM VLKHDQHRNVPRIVIDCCDLIEQKYRRSTQPIEGIYRQCGDYNKIQTLRFSIDANDYD ALRQPDVDIHTLTGVLKLFLREIKSPLVSVNEAKTFIGPPNQWLLTDLSAKLETLKRL IRSLPESNRDTMDYIFGHFNRLTKVPLQQISAETLSISVTPSIFHTVPQGVHMQDIQQ LLREGETLADCVKLMIEYQNRIFE" misc_feature 1936..2481 /gene="RhoGAP16F" /note="GTPase-activator protein (GAP) for Rho-like GTPases; GAPs towards Rho/Rac/Cdc42-like small GTPases. Small GTPases (G proteins) cluster into distinct families, and all act as molecular switches, active in their GTP-bound form but inactive when bound to...; Region: RhoGAP; cd00159" /db_xref="CDD:238090" misc_feature order(2014..2016,2128..2130,2140..2142,2353..2355, 2362..2367,2452..2454) /gene="RhoGAP16F" /note="GTPase interaction site; other site" /db_xref="CDD:238090" misc_feature 2014..2016 /gene="RhoGAP16F" /note="catalytic residue [active]" /db_xref="CDD:238090" ORIGIN 1 atagtgaaga cttaaagttt ggaatatatt tttgtacctc aagatctcta gattttgtag 61 taatattcca gggaatttac tttagattat accttttact tcacaacttc taacattgta 121 ataatcgaat caaaagttcc ctttttatag caataatttg tactgtttcc ttgacttacg 181 gaagtattta cccttctaga cttaatcttt gaagatttaa agtttggaat atattttttg 241 tacctcaaga tctctagatt ttttgtactg ttccaggaaa tttactttag actatccctt 301 tttctttata atttccataa tagtaacatt tttttgaacg gatatagaaa atagccctcc 361 cttcccatca ctgccgataa gtcatgttct taaatcccca tttgttcgcc tggtcaaggc 421 cctgatttgc tccagttacc cagaaatagc caaagtccaa acagaagcca aggcagagtg 481 atattaaagt gcgttccaaa ggaagatggg aactcctccc tggcatttca cacattatcg 541 tcaattcagt aactttattt atttatattc gtgcccagca ctttggcatt tgtttggctc 601 tgttctgttt cccccgtggt tatcttatcg cgagtgtcgg agtggctgcg actgcgactg 661 tggaacaatt ggaagtgcga taagcgcccg cagaatgccc acagaattcc aaccgctcaa 721 cggcgcaggc agtcagttga aatcggagct gcctgcgaat tatccactat ccatgaccga 781 ccggcaatcg agccgctgat actgcgtcat caaggaaata ggtctgcata atcggaagcc 841 caagaagtga tcgatgttgc aagttctcgg ggcaacacaa ttatcagtcg caacggaaat 901 cggctcttga aaggcggaag agaagagcag caggaggagg aagcggagga ggaggaggag 961 caactggtca gctgcctcac cctttggcgg gcagaagcga taagcagcga accgagaaga 1021 aactaaagag gaaaccccaa cgataagcga ttccccccct ccccaaaaga aggcatcatg 1081 cagacgacga caagtcagcg gccagttacg cctggcactc cagactcggc acacatcgtg 1141 atcggcgcgg cgggattcgt ggcccacgag agacggcaga cgggaaagag cctgatgaat 1201 tgcttccgcg atcgctccac gaccacgtcg tcgtccacgt cgcagcagca gcgcggccac 1261 agcagcctgt ttcgcctgga gggcaacggc ggcggcggcg gctccaattg ccaactggat 1321 agggattccg gtcgacccga ggctgttgtt ctcctgcggg agctcaagag caaacccaac 1381 aagctggccc tgctcaagag cagcagctcg agggatctga cgcgcctcta cctcgatgat 1441 gccaccaaca cagccgtttt ggtttcgaac accagcctgg atgtctgctc ctcgaattcc 1501 agctccgccg gcagcccggg cagatcaacg aaaagcagga cggagtgctg cagcagctgc 1561 tcgaggcgat ggcatgagct caagcagcgc atgcacacgc tggagcagga tctgctcgtc 1621 cagacgacct acggccagga attggagcag aaggtgggcg agatgagtcg tcagttgaat 1681 gaattactac aggaacgaga cagagacaag gagaaaccac gctccttggg attagctggc 1741 aagcgggcat atccccctgc cgccgggagt cccaatgtgc gaccctcgcg actggtggcc 1801 tggatgaatc tgtccaactg gttcaagagc cgaccgagcg tggaaacgct gcgggagcag 1861 cgcatcttct tcgacgagcc ctgcttcgat acggaactgg agatggtctt gaagcacgac 1921 cagcaccgca atgtcccgcg aattgtgatc gattgctgtg atctcatcga gcagaagtac 1981 cgccgctcca cgcagcccat cgagggcatc tacaggcagt gcggcgacta caataagatc 2041 caaacgctgc gcttcagcat cgatgcaaat gattatgatg cactgcgtca gccggacgtc 2101 gatatacaca cgctgaccgg ggtgctaaag ctattcctgc gcgaaatcaa gagtccgctg 2161 gtcagcgtca acgaggccaa gaccttcatt ggaccgccca atcagtggtt gctcaccgat 2221 ctttccgcca agctggagac cctcaaaaga ctgatacgct cgctgccgga gagcaaccgc 2281 gacaccatgg actatatctt cgggcacttc aatagattga ccaaagtgcc gctgcagcag 2341 atcagcgccg agacgctgtc catatcggtg acaccctcga tcttccacac ggtgccgcag 2401 ggcgtccaca tgcaggacat acagcagctg ctccgcgagg gcgaaactct ggccgactgc 2461 gttaagctga tgatcgagta ccaaaatcgc atattcgagt aagtcagctg gtggaggaga 2521 gggctcccgt ctccctggtg aaggtgccgc tactttccgt cgtttcccca aaaaacccaa 2581 acaaagaatc ccagctgctt gcgcctcatc caaaaagttt gtgccgtttg cctcgaaaac 2641 tttgctaacc acacgtaatc ctgaatcctg aaccccgaac ctgaacctga acctgaaccc 2701 actgtacctg caactccaat ccccccatct acagatgcac cgccgatcga cgccgtttga 2761 gcatgcgcaa cctgaagaag actctgtcgc agccggattt gctcttccac aatctattct 2821 gatctgatga cccgatgcca tgtggatcta ctgatccttc aggccagaga gagcactgta 2881 catattgaat gacatatttc ttattgattt tttttacatc ctaactttat aaacatactt 2941 ttgtacttat gttaaataaa