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LOCUS XM_017155714 4510 bp mRNA linear INV 09-DEC-2024 regulatory subunit alpha (LOC108066922), transcript variant X11, mRNA. ACCESSION XM_017155714 VERSION XM_017155714.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017155714.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4510 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..4510 /gene="LOC108066922" /note="probable phosphorylase b kinase regulatory subunit alpha; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108066922" CDS 349..4035 /gene="LOC108066922" /codon_start=1 /product="probable phosphorylase b kinase regulatory subunit alpha isoform X11" /protein_id="XP_017011203.1" /db_xref="GeneID:108066922" /translation="MRSRSNSGVRLDYYQRIVHRLILAHQEPVTGLFPASNVNSHAWI RDNVYCILAVWGLSMAYKKIADQDEDRAKCYELEQSCVKLMRGLLMAMMNQKDKVEKF KMTQSPYDSLHAKYSSKNGLPVVGDNEWGHLQIDAVSLYLLILAQMTASGLQIVFSLD EVSFIQNLVFYIESAYSIPDYGIWERGDKTNHGEPELNASSIGMAKAALEAMNELDLF GARGGPASVIHVLADEAHKCQAVLQSMLPRESNSKELDSGLLCVIGFPAFAVDDAQLI HNTKDAILSRLQGKYGCKRFLRDGYRTPKEDPSRLYYERWELRMFENIECEWPLFYCY LILFHAFQSDKRAVEEYAGRLEKIMVRSEDGILLVPESYAVPQDLVGFEYQKPGSQAR EVVGRCPFLWGQSLFILGRLLQEGFLAVGELDPLNRRLGAQKKPDVVVQVVIIAEDNE IRDKLAEHDLHVQTIAEVAPIEVQPARVLSHLYTYLGRNRKLGLSGRKSRDVGILSTS KLYSLKDRIFAFTPQFADLSRFYIASDNELMIDILKGEINFLKSAWDLLGRPLVTLVL KRIHLDQDKIPLAMIQTMRKLKSGYINGTRVMLGSLKDFLNTSAITDLSFLGSTEDGY PDRLHPDVQTYLDEHLLRSFSNRSTMNLRGGQLRPRTLRRRMSCKGAIKKTRSINVDS DNLGMEGPSPLTERRLSSIVPPPWLQANKQSHVSVFATTPEEGPASSPLQLGNELSVR ENIYPVDPHHSRSAIDRRSEFVRQQEMPKILIQRHRAETNFADTEVEELIAMLRETEN LEEQGDILQYLVDTQGLDFNTGMLEEGRVVTVRDLLKGLYEKACQQKLWGLVRHTAGM LGKRVEDLAKAVTDLLVRQKQVTVGMPPNNEHTITAPLPEVELRQLIHDAYGDDESTA MLTQELMVYLAMFIRTEPQLFHEMLRLRVGLIIQVMAKELSRTLNCDGEAASEHLLNL SPFEMKNLLYHILSGKEFAVSSVARGNLSIVSCKSSRVSKKSQIGLGDPEGEDALIAT IDDRQGQWLRRRRLDGALNRVPRDFYSRVWTVLEKCQGLAIEGRVLQQSLTQEMTPGE LKFALEVETALNQIPQPEYRQLVVEALMVLTLVTEHNMVPTLGGIIYVEHLVHKANQL FLEDQRKVQGDATLCCAKIKDGKEQQQAASGMLLCGGAAYICQHLYDSAPSGSYGTMT YMSRAVALVLDCVPKHGEMECAIS" misc_feature 370..>1665 /gene="LOC108066922" /note="Glycosyl hydrolases family 15; Region: Glyco_hydro_15; pfam00723" /db_xref="CDD:395586" misc_feature <2833..3183 /gene="LOC108066922" /note="Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain; Region: Bac_rhamnosid6H; cl46875" /db_xref="CDD:481215" misc_feature 3214..>3738 /gene="LOC108066922" /note="Phosphorylase b kinase C-terminal domain; Region: KPBB_C; pfam19292" /db_xref="CDD:437124" polyA_site 4510 /gene="LOC108066922" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 caacgctgcc ggcagaaata tcgataaatt gaattgacat tgagttgact ttaggtgcat 61 tttaacgaca atatatctcg atttattcgc aaacaagtga ccagccaggc ttcgaaacgc 121 gaacggcagc caagcgccac tccctcctcc gaatcccgga gagaatgcgc tgtcctcgcg 181 gcgaactgaa cgcattctac gggttctagc ggcgcgaggt gttccgggga gctctgggct 241 tcctcctcct ccactccgcc gaacggaacc acaacaaaac gatccgaagc gatcccaacc 301 gatccgatcc aatccgatcc gacattataa accacctcga aaacggccat gcgttcccgc 361 agcaattcgg gcgtccggtt ggactactac cagcgcatcg tgcaccgtct gatcttggcc 421 caccaggagc cggtcaccgg tctgttcccc gcctccaatg tcaactcaca cgcctggatc 481 agggacaatg tgtactgcat cctggccgtc tggggcctgt ccatggccta caagaagatc 541 gccgaccagg acgaggaccg ggccaagtgc tatgagctcg agcagagctg cgtgaagctg 601 atgcgcggcc tgctcatggc catgatgaac cagaaggaca aggtggagaa gttcaagatg 661 acccagagtc cctacgactc cctccacgcc aagtactcga gcaagaacgg cctgcccgtc 721 gtcggcgaca atgagtgggg ccatctgcag atcgatgccg tctccctgta cctgctgatc 781 ctggcccaga tgacggcctc cggtctgcag atcgtcttct ccctggacga ggtgtcgttc 841 atccagaatc tggtcttcta cattgagtcc gcctactcca ttccggacta cggaatatgg 901 gaacgcggcg acaagaccaa tcatggcgag cccgagttga atgccagctc cattggcatg 961 gccaaggcgg cgctggaggc gatgaacgag ctggatctgt tcggggcgcg cggcgggccg 1021 gccagtgtga tccatgtgct ggccgacgag gcccacaaat gccaggcggt gctccagtcg 1081 atgctgccgc gtgagtccaa cagcaaggag ctggactcgg gactgctctg tgtcattgga 1141 tttccggcct ttgccgtcga cgatgcccag ctgatacaca acaccaagga tgcgatattg 1201 tcgcgactgc agggcaagta cggctgcaag cggttcctgc gcgacggcta ccgcactccc 1261 aaggaggatc catcgcggct ctactacgaa cgctgggagc tgcgcatgtt cgagaacatc 1321 gagtgcgagt ggccgctctt ctactgctac ctgattctct tccacgcctt ccagagcgac 1381 aagcgggcgg tggaggagta cgccggccgg ctggagaaga tcatggtgcg ctcggaggat 1441 ggcatactgc tcgtgccgga gagctatgcg gtgccgcagg atctggtggg cttcgagtac 1501 cagaagccgg gatcgcaggc ccgcgaagtg gtcggtcgct gcccgttcct gtggggccag 1561 tccctgttta tcctcggccg cttgctgcag gagggcttct tggccgtggg cgagctggat 1621 ccgctgaatc gtcgcctggg cgcgcaaaag aaacccgatg tggtcgtcca ggtggtcatc 1681 attgccgagg acaacgagat ccgcgacaag ctggccgagc acgatctgca tgtgcagaca 1741 atcgccgagg tggctcccat tgaggtgcag ccagcccgtg ttttgagtca cctgtacacc 1801 tacctcgggc gcaaccgcaa gctgggtttg agcggcagga agtcccgcga tgtgggcatt 1861 ctcagcacca gcaagttgta ctcgctgaag gatcgcatat tcgctttcac cccgcagttc 1921 gccgacctgt cgcgcttcta tatcgcctcc gataacgaac tcatgatcga catcctcaag 1981 ggcgagataa atttcctcaa gtccgcttgg gatctgctgg gtcgtccgct ggtcaccctg 2041 gtgctgaagc gcatccacct agatcaggac aagattccgc tggccatgat ccagacgatg 2101 cggaaactca agtcgggcta catcaacggg acgcgcgtga tgctgggcag cctgaaggac 2161 ttcctcaaca cctcggccat cacggacctg agcttcctgg gcagcacgga ggatggctat 2221 ccggatcgcc tgcatccgga cgtgcagacg tacctcgacg agcacctgct gcgctcgttc 2281 agcaaccgca gcacaatgaa tctgcgcggc ggacagctgc gtccgcggac cctcaggcgc 2341 cgcatgtcct gcaagggagc gatcaagaag acgcgctcga tcaacgtgga ttccgacaac 2401 ctcggcatgg agggaccctc gccgctcacc gaacgccgcc tctcctcgat tgtgccgcct 2461 ccctggctgc aggccaacaa gcagagccac gtcagcgtct tcgccaccac gcccgaggag 2521 ggaccggcca gctcgcccct gcaactgggc aacgagctgt ccgtccgcga gaacatctat 2581 ccggtggatc cgcaccacag ccgctcggcg atcgacagac gcagcgagtt tgtgcgccag 2641 caagagatgc ccaaaattct catacaacgc catcgtgccg aaaccaattt cgcggacaca 2701 gaggtcgagg agctgattgc gatgctgcgc gaaacggaga atctcgagga gcagggcgac 2761 atcctgcagt acctggtgga cacccagggc ctggacttca acacaggaat gctggaggag 2821 ggacgcgtgg tgaccgtgcg ggatctgttg aagggactct acgagaaggc ctgccagcag 2881 aagctctggg gactcgtccg ccacacggcc gggatgctgg gcaagcgggt ggaggatctg 2941 gccaaggcgg tcaccgatct gctggtgcgc cagaagcagg tcaccgtggg aatgccgccg 3001 aacaatgagc acaccatcac ggcgccgctg ccggaagtcg agctgcgaca gctcatccat 3061 gatgcctatg gcgacgatga gagcactgcg atgctcaccc aggagctgat ggtctacctg 3121 gccatgttca ttcgcaccga gccgcagctg ttccacgaga tgctgcgcct gcgcgtcggc 3181 ctgatcatcc aggtgatggc caaggagctg tcccgcaccc tcaactgcga cggcgaggcg 3241 gcgtcggagc atttacttaa cctctcgccc ttcgagatga agaatctcct ctaccacata 3301 ctcagcggca aggagtttgc agtcagcagt gtggcccgtg gcaatctgtc cattgttagc 3361 tgcaagagca gccgcgtcag caagaagagc caaatcggtc tgggcgatcc ggagggcgag 3421 gacgctttaa tagccaccat tgacgaccgg cagggacagt ggctgcgtcg caggcgactg 3481 gatggcgccc tgaatcgtgt gccccgtgac ttttattcgc gcgtttggac cgttttggag 3541 aagtgccagg gtctggccat cgagggacgc gtcctgcagc agagtctcac ccaggagatg 3601 acgccgggcg aactgaagtt cgccctcgaa gtggagacgg ccctcaatca gataccgcag 3661 cccgagtaca ggcagctggt ggtggaggcc ctgatggtgc tcaccctcgt caccgagcac 3721 aacatggtgc ccactctcgg gggcatcatc tacgtggagc atctggtgca caaggccaac 3781 cagctgttcc tcgaggacca gcgcaaggtg cagggcgatg ccacgctgtg ctgcgccaag 3841 atcaaggacg gcaaggagca gcagcaggcc gcctcgggga tgctgctgtg cggcggcgcc 3901 gcctacatat gccagcacct ctacgacagt gctcccagcg gcagctacgg aaccatgacc 3961 tacatgtccc gggcggtggc cctggtgctc gactgtgtgc ccaagcacgg cgagatggag 4021 tgcgccatct cctgaagcgg cgggcctcca cttaatgtaa tgccaaaatc tctagctctg 4081 caactctgga tacgtccgtt ctcgttctcg cttagccccg tctcgctttc tctcgatcct 4141 gtcctgcatt tttttgtttt tcccagcctc tgacccaaaa tgtatatatt ctttgacccg 4201 aaaacctgtt tgttctgacc gaaaacgaag gcagaattaa gaagccaatc gaatggtatt 4261 agcccactta tgtgtgtgtg ttgacccttt ggaaggatac tccaaaagcc ccccccccaa 4321 aaacagatcc ctatcccaat cctaaaccat ttggaaagcc aacagtacag atttgttttt 4381 tgtacttgcg gacgacactt ttgattgttt taacttttat atttttaact gaccctattt 4441 tatattatac gtttgaattg taaagttgaa cgcgcagcaa gatttacaat aaaaatgtgt 4501 ttgcaatgtt