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LOCUS XM_017155712 4576 bp mRNA linear INV 09-DEC-2024 regulatory subunit alpha (LOC108066922), transcript variant X9, mRNA. ACCESSION XM_017155712 VERSION XM_017155712.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017155712.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4576 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..4576 /gene="LOC108066922" /note="probable phosphorylase b kinase regulatory subunit alpha; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108066922" CDS 349..4101 /gene="LOC108066922" /codon_start=1 /product="probable phosphorylase b kinase regulatory subunit alpha isoform X9" /protein_id="XP_017011201.1" /db_xref="GeneID:108066922" /translation="MRSRSNSGVRLDYYQRIVHRLILAHQEPVTGLFPASNVNSHAWI RDNVYCILAVWGLSMAYKKIADQDEDRAKCYELEQSCVKLMRGLLMAMMNQKDKVEKF KMTQSPYDSLHAKYSSKNGLPVVGDNEWGHLQIDAVSLYLLILAQMTASGLQIVFSLD EVSFIQNLVFYIESAYSIPDYGIWERGDKTNHGEPELNASSIGMAKAALEAMNELDLF GARGGPASVIHVLADEAHKCQAVLQSMLPRESNSKELDSGLLCVIGFPAFAVDDAQLI HNTKDAILSRLQGKYGCKRFLRDGYRTPKEDPSRLYYERWELRMFENIECEWPLFYCY LILFHAFQSDKRAVEEYAGRLEKIMVRSEDGILLVPESYAVPQDLVGFEYQKPGSQAR EVVGRCPFLWGQSLFILGRLLQEGFLAVGELDPLNRRLGAQKKPDVVVQVVIIAEDNE IRDKLAEHDLHVQTIAEVAPIEVQPARVLSHLYTYLGRNRKLGLSGRKSRDVGILSTS KLYSLKDRIFAFTPQFADLSRFYIASDNELMIDILKGEINFLKSAWDLLGRPLVTLVL KRIHLDQDKIPLAMIQTMRKLKSGYINGTRVMLGSLKDFLNTSAITDLSFLGSTEDGY PDRLHPDVQTYLDEHLLRSFSNRSTMNLRGGQLRPRTLRRRMSCKGAIKKTRSINVDS DNLGMEGPSPLTERRLSSIVPPPWLQANKQSHVSVFATTPEEGPASSPLQLGNELSVR ENIYPVDPHHSRSAIDRRSEFVRQQEMPKILIQRHRAETNFADTEVEELIAMLRETEN LEEQGDILQYLVDTQGLDFNTAGLGFKNKSDDNATPNANGAAAGMLEEGRVVTVRDLL KGLYEKACQQKLWGLVRHTAGMLGKRVEDLAKAVTDLLVRQKQVTVGMPPNNEHTITA PLPEVELRQLIHDAYGDDESTAMLTQELMVYLAMFIRTEPQLFHEMLRLRVGLIIQVM AKELSRTLNCDGEAASEHLLNLSPFEMKNLLYHILSGKEFAVSSVARGNLSIVSCKSS RVSKKSQIGLGDPEGEDALIATIDDRQGQWLRRRRLDGALNRVPRDFYSRVWTVLEKC QGLAIEGRVLQQSLTQEMTPGELKFALEVETALNQIPQPEYRQLVVEALMVLTLVTEH NMVPTLGGIIYVEHLVHKANQLFLEDQRKVQGDATLCCAKIKDGKEQQQAASGMLLCG GAAYICQHLYDSAPSGSYGTMTYMSRAVALVLDCVPKHGEMECAIS" misc_feature 370..>1665 /gene="LOC108066922" /note="Glycosyl hydrolases family 15; Region: Glyco_hydro_15; pfam00723" /db_xref="CDD:395586" misc_feature <2899..3249 /gene="LOC108066922" /note="Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain; Region: Bac_rhamnosid6H; cl46875" /db_xref="CDD:481215" misc_feature 3280..>3804 /gene="LOC108066922" /note="Phosphorylase b kinase C-terminal domain; Region: KPBB_C; pfam19292" /db_xref="CDD:437124" polyA_site 4576 /gene="LOC108066922" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 caacgctgcc ggcagaaata tcgataaatt gaattgacat tgagttgact ttaggtgcat 61 tttaacgaca atatatctcg atttattcgc aaacaagtga ccagccaggc ttcgaaacgc 121 gaacggcagc caagcgccac tccctcctcc gaatcccgga gagaatgcgc tgtcctcgcg 181 gcgaactgaa cgcattctac gggttctagc ggcgcgaggt gttccgggga gctctgggct 241 tcctcctcct ccactccgcc gaacggaacc acaacaaaac gatccgaagc gatcccaacc 301 gatccgatcc aatccgatcc gacattataa accacctcga aaacggccat gcgttcccgc 361 agcaattcgg gcgtccggtt ggactactac cagcgcatcg tgcaccgtct gatcttggcc 421 caccaggagc cggtcaccgg tctgttcccc gcctccaatg tcaactcaca cgcctggatc 481 agggacaatg tgtactgcat cctggccgtc tggggcctgt ccatggccta caagaagatc 541 gccgaccagg acgaggaccg ggccaagtgc tatgagctcg agcagagctg cgtgaagctg 601 atgcgcggcc tgctcatggc catgatgaac cagaaggaca aggtggagaa gttcaagatg 661 acccagagtc cctacgactc cctccacgcc aagtactcga gcaagaacgg cctgcccgtc 721 gtcggcgaca atgagtgggg ccatctgcag atcgatgccg tctccctgta cctgctgatc 781 ctggcccaga tgacggcctc cggtctgcag atcgtcttct ccctggacga ggtgtcgttc 841 atccagaatc tggtcttcta cattgagtcc gcctactcca ttccggacta cggaatatgg 901 gaacgcggcg acaagaccaa tcatggcgag cccgagttga atgccagctc cattggcatg 961 gccaaggcgg cgctggaggc gatgaacgag ctggatctgt tcggggcgcg cggcgggccg 1021 gccagtgtga tccatgtgct ggccgacgag gcccacaaat gccaggcggt gctccagtcg 1081 atgctgccgc gtgagtccaa cagcaaggag ctggactcgg gactgctctg tgtcattgga 1141 tttccggcct ttgccgtcga cgatgcccag ctgatacaca acaccaagga tgcgatattg 1201 tcgcgactgc agggcaagta cggctgcaag cggttcctgc gcgacggcta ccgcactccc 1261 aaggaggatc catcgcggct ctactacgaa cgctgggagc tgcgcatgtt cgagaacatc 1321 gagtgcgagt ggccgctctt ctactgctac ctgattctct tccacgcctt ccagagcgac 1381 aagcgggcgg tggaggagta cgccggccgg ctggagaaga tcatggtgcg ctcggaggat 1441 ggcatactgc tcgtgccgga gagctatgcg gtgccgcagg atctggtggg cttcgagtac 1501 cagaagccgg gatcgcaggc ccgcgaagtg gtcggtcgct gcccgttcct gtggggccag 1561 tccctgttta tcctcggccg cttgctgcag gagggcttct tggccgtggg cgagctggat 1621 ccgctgaatc gtcgcctggg cgcgcaaaag aaacccgatg tggtcgtcca ggtggtcatc 1681 attgccgagg acaacgagat ccgcgacaag ctggccgagc acgatctgca tgtgcagaca 1741 atcgccgagg tggctcccat tgaggtgcag ccagcccgtg ttttgagtca cctgtacacc 1801 tacctcgggc gcaaccgcaa gctgggtttg agcggcagga agtcccgcga tgtgggcatt 1861 ctcagcacca gcaagttgta ctcgctgaag gatcgcatat tcgctttcac cccgcagttc 1921 gccgacctgt cgcgcttcta tatcgcctcc gataacgaac tcatgatcga catcctcaag 1981 ggcgagataa atttcctcaa gtccgcttgg gatctgctgg gtcgtccgct ggtcaccctg 2041 gtgctgaagc gcatccacct agatcaggac aagattccgc tggccatgat ccagacgatg 2101 cggaaactca agtcgggcta catcaacggg acgcgcgtga tgctgggcag cctgaaggac 2161 ttcctcaaca cctcggccat cacggacctg agcttcctgg gcagcacgga ggatggctat 2221 ccggatcgcc tgcatccgga cgtgcagacg tacctcgacg agcacctgct gcgctcgttc 2281 agcaaccgca gcacaatgaa tctgcgcggc ggacagctgc gtccgcggac cctcaggcgc 2341 cgcatgtcct gcaagggagc gatcaagaag acgcgctcga tcaacgtgga ttccgacaac 2401 ctcggcatgg agggaccctc gccgctcacc gaacgccgcc tctcctcgat tgtgccgcct 2461 ccctggctgc aggccaacaa gcagagccac gtcagcgtct tcgccaccac gcccgaggag 2521 ggaccggcca gctcgcccct gcaactgggc aacgagctgt ccgtccgcga gaacatctat 2581 ccggtggatc cgcaccacag ccgctcggcg atcgacagac gcagcgagtt tgtgcgccag 2641 caagagatgc ccaaaattct catacaacgc catcgtgccg aaaccaattt cgcggacaca 2701 gaggtcgagg agctgattgc gatgctgcgc gaaacggaga atctcgagga gcagggcgac 2761 atcctgcagt acctggtgga cacccagggc ctggacttca acacagctgg cctgggattc 2821 aagaacaaat cggacgacaa tgcgacccca aatgccaatg gtgcagccgc cggaatgctg 2881 gaggagggac gcgtggtgac cgtgcgggat ctgttgaagg gactctacga gaaggcctgc 2941 cagcagaagc tctggggact cgtccgccac acggccggga tgctgggcaa gcgggtggag 3001 gatctggcca aggcggtcac cgatctgctg gtgcgccaga agcaggtcac cgtgggaatg 3061 ccgccgaaca atgagcacac catcacggcg ccgctgccgg aagtcgagct gcgacagctc 3121 atccatgatg cctatggcga cgatgagagc actgcgatgc tcacccagga gctgatggtc 3181 tacctggcca tgttcattcg caccgagccg cagctgttcc acgagatgct gcgcctgcgc 3241 gtcggcctga tcatccaggt gatggccaag gagctgtccc gcaccctcaa ctgcgacggc 3301 gaggcggcgt cggagcattt acttaacctc tcgcccttcg agatgaagaa tctcctctac 3361 cacatactca gcggcaagga gtttgcagtc agcagtgtgg cccgtggcaa tctgtccatt 3421 gttagctgca agagcagccg cgtcagcaag aagagccaaa tcggtctggg cgatccggag 3481 ggcgaggacg ctttaatagc caccattgac gaccggcagg gacagtggct gcgtcgcagg 3541 cgactggatg gcgccctgaa tcgtgtgccc cgtgactttt attcgcgcgt ttggaccgtt 3601 ttggagaagt gccagggtct ggccatcgag ggacgcgtcc tgcagcagag tctcacccag 3661 gagatgacgc cgggcgaact gaagttcgcc ctcgaagtgg agacggccct caatcagata 3721 ccgcagcccg agtacaggca gctggtggtg gaggccctga tggtgctcac cctcgtcacc 3781 gagcacaaca tggtgcccac tctcgggggc atcatctacg tggagcatct ggtgcacaag 3841 gccaaccagc tgttcctcga ggaccagcgc aaggtgcagg gcgatgccac gctgtgctgc 3901 gccaagatca aggacggcaa ggagcagcag caggccgcct cggggatgct gctgtgcggc 3961 ggcgccgcct acatatgcca gcacctctac gacagtgctc ccagcggcag ctacggaacc 4021 atgacctaca tgtcccgggc ggtggccctg gtgctcgact gtgtgcccaa gcacggcgag 4081 atggagtgcg ccatctcctg aagcggcggg cctccactta atgtaatgcc aaaatctcta 4141 gctctgcaac tctggatacg tccgttctcg ttctcgctta gccccgtctc gctttctctc 4201 gatcctgtcc tgcatttttt tgtttttccc agcctctgac ccaaaatgta tatattcttt 4261 gacccgaaaa cctgtttgtt ctgaccgaaa acgaaggcag aattaagaag ccaatcgaat 4321 ggtattagcc cacttatgtg tgtgtgttga ccctttggaa ggatactcca aaagcccccc 4381 ccccaaaaac agatccctat cccaatccta aaccatttgg aaagccaaca gtacagattt 4441 gttttttgta cttgcggacg acacttttga ttgttttaac ttttatattt ttaactgacc 4501 ctattttata ttatacgttt gaattgtaaa gttgaacgcg cagcaagatt tacaataaaa 4561 atgtgtttgc aatgtt