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LOCUS XM_017155711 4579 bp mRNA linear INV 09-DEC-2024 regulatory subunit alpha (LOC108066922), transcript variant X8, mRNA. ACCESSION XM_017155711 VERSION XM_017155711.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017155711.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4579 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..4579 /gene="LOC108066922" /note="probable phosphorylase b kinase regulatory subunit alpha; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108066922" CDS 349..4104 /gene="LOC108066922" /codon_start=1 /product="probable phosphorylase b kinase regulatory subunit alpha isoform X8" /protein_id="XP_017011200.1" /db_xref="GeneID:108066922" /translation="MRSRSNSGVRLDYYQRIVHRLILAHQEPVTGLFPASNVNSHAWI RDNVYCILAVWGLSMAYKKIADQDEDRAKCYELEQSCVKLMRGLLMAMMNQKDKVEKF KMTQSPYDSLHAKYSSKNGLPVVGDNEWGHLQIDAVSLYLLILAQMTASGLQIVFSLD EVSFIQNLVFYIESAYSIPDYGIWERGDKTNHGEPELNASSIGMAKAALEAMNELDLF GARGGPASVIHVLADEAHKCQAVLQSMLPRESNSKELDSGLLCVIGFPAFAVDDAQLI HNTKDAILSRLQGKYGCKRFLRDGYRTPKEDPSRLYYERWELRMFENIECEWPLFYCY LILFHAFQSDKRAVEEYAGRLEKIMVRSEDGILLVPESYAVPQDLVGFEYQKPGSQAR EVVGRCPFLWGQSLFILGRLLQEGFLAVGELDPLNRRLGAQKKPDVVVQVVIIAEDNE IRDKLAEHDLHVQTIAEVAPIEVQPARVLSHLYTYLGRNRKLGLSGRKSRDVGILSTS KLYSLKDRIFAFTPQHIDYEEYYTTRDPDLLASNFTTNLAFLTNNWRHMLGRPTITLM ATHYMLDQDKIPLAMIQTMRKLKSGYINGTRVMLGSLKDFLNTSAITDLSFLGSTEDG YPDRLHPDVQTYLDEHLLRSFSNRSTMNLRGGQLRPRTLRRRMSCKGAIKKTRSINVD SDNLGMEGPSPLTERRLSSIVPPPWLQANKQSHVSVFATTPEEGPASSPLQLGNELSV RENIYPVDPHHSRSAIDRRSEFVRQQEMPKILIQRHRAETNFADTEVEELIAMLRETE NLEEQGDILQYLVDTQGLDFNTAGLGFKNKSDDNATPNANGAAAGMLEEGRVVTVRDL LKGLYEKACQQKLWGLVRHTAGMLGKRVEDLAKAVTDLLVRQKQVTVGMPPNNEHTIT APLPEVELRQLIHDAYGDDESTAMLTQELMVYLAMFIRTEPQLFHEMLRLRVGLIIQV MAKELSRTLNCDGEAASEHLLNLSPFEMKNLLYHILSGKEFAVSSVARGNLSIVSCKS SRVSKKSQIGLGDPEGEDALIATIDDRQGQWLRRRRLDGALNRVPRDFYSRVWTVLEK CQGLAIEGRVLQQSLTQEMTPGELKFALEVETALNQIPQPEYRQLVVEALMVLTLVTE HNMVPTLGGIIYVEHLVHKANQLFLEDQRKVQGDATLCCAKIKDGKEQQQAASGMLLC GGAAYICQHLYDSAPSGSYGTMTYMSRAVALVLDCVPKHGEMECAIS" misc_feature 370..>1665 /gene="LOC108066922" /note="Glycosyl hydrolases family 15; Region: Glyco_hydro_15; pfam00723" /db_xref="CDD:395586" misc_feature <2902..3252 /gene="LOC108066922" /note="Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain; Region: Bac_rhamnosid6H; cl46875" /db_xref="CDD:481215" misc_feature 3283..>3807 /gene="LOC108066922" /note="Phosphorylase b kinase C-terminal domain; Region: KPBB_C; pfam19292" /db_xref="CDD:437124" polyA_site 4579 /gene="LOC108066922" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 caacgctgcc ggcagaaata tcgataaatt gaattgacat tgagttgact ttaggtgcat 61 tttaacgaca atatatctcg atttattcgc aaacaagtga ccagccaggc ttcgaaacgc 121 gaacggcagc caagcgccac tccctcctcc gaatcccgga gagaatgcgc tgtcctcgcg 181 gcgaactgaa cgcattctac gggttctagc ggcgcgaggt gttccgggga gctctgggct 241 tcctcctcct ccactccgcc gaacggaacc acaacaaaac gatccgaagc gatcccaacc 301 gatccgatcc aatccgatcc gacattataa accacctcga aaacggccat gcgttcccgc 361 agcaattcgg gcgtccggtt ggactactac cagcgcatcg tgcaccgtct gatcttggcc 421 caccaggagc cggtcaccgg tctgttcccc gcctccaatg tcaactcaca cgcctggatc 481 agggacaatg tgtactgcat cctggccgtc tggggcctgt ccatggccta caagaagatc 541 gccgaccagg acgaggaccg ggccaagtgc tatgagctcg agcagagctg cgtgaagctg 601 atgcgcggcc tgctcatggc catgatgaac cagaaggaca aggtggagaa gttcaagatg 661 acccagagtc cctacgactc cctccacgcc aagtactcga gcaagaacgg cctgcccgtc 721 gtcggcgaca atgagtgggg ccatctgcag atcgatgccg tctccctgta cctgctgatc 781 ctggcccaga tgacggcctc cggtctgcag atcgtcttct ccctggacga ggtgtcgttc 841 atccagaatc tggtcttcta cattgagtcc gcctactcca ttccggacta cggaatatgg 901 gaacgcggcg acaagaccaa tcatggcgag cccgagttga atgccagctc cattggcatg 961 gccaaggcgg cgctggaggc gatgaacgag ctggatctgt tcggggcgcg cggcgggccg 1021 gccagtgtga tccatgtgct ggccgacgag gcccacaaat gccaggcggt gctccagtcg 1081 atgctgccgc gtgagtccaa cagcaaggag ctggactcgg gactgctctg tgtcattgga 1141 tttccggcct ttgccgtcga cgatgcccag ctgatacaca acaccaagga tgcgatattg 1201 tcgcgactgc agggcaagta cggctgcaag cggttcctgc gcgacggcta ccgcactccc 1261 aaggaggatc catcgcggct ctactacgaa cgctgggagc tgcgcatgtt cgagaacatc 1321 gagtgcgagt ggccgctctt ctactgctac ctgattctct tccacgcctt ccagagcgac 1381 aagcgggcgg tggaggagta cgccggccgg ctggagaaga tcatggtgcg ctcggaggat 1441 ggcatactgc tcgtgccgga gagctatgcg gtgccgcagg atctggtggg cttcgagtac 1501 cagaagccgg gatcgcaggc ccgcgaagtg gtcggtcgct gcccgttcct gtggggccag 1561 tccctgttta tcctcggccg cttgctgcag gagggcttct tggccgtggg cgagctggat 1621 ccgctgaatc gtcgcctggg cgcgcaaaag aaacccgatg tggtcgtcca ggtggtcatc 1681 attgccgagg acaacgagat ccgcgacaag ctggccgagc acgatctgca tgtgcagaca 1741 atcgccgagg tggctcccat tgaggtgcag ccagcccgtg ttttgagtca cctgtacacc 1801 tacctcgggc gcaaccgcaa gctgggtttg agcggcagga agtcccgcga tgtgggcatt 1861 ctcagcacca gcaagttgta ctcgctgaag gatcgcatat tcgctttcac cccgcagcat 1921 atcgactatg aagaatatta tacaacacgc gatcccgatt tgcttgccag caattttacc 1981 acaaatttag cattcttgac caacaattgg cgtcacatgt tgggcaggcc gacaatcaca 2041 ctaatggcaa cccactatat gctagatcag gacaagattc cgctggccat gatccagacg 2101 atgcggaaac tcaagtcggg ctacatcaac gggacgcgcg tgatgctggg cagcctgaag 2161 gacttcctca acacctcggc catcacggac ctgagcttcc tgggcagcac ggaggatggc 2221 tatccggatc gcctgcatcc ggacgtgcag acgtacctcg acgagcacct gctgcgctcg 2281 ttcagcaacc gcagcacaat gaatctgcgc ggcggacagc tgcgtccgcg gaccctcagg 2341 cgccgcatgt cctgcaaggg agcgatcaag aagacgcgct cgatcaacgt ggattccgac 2401 aacctcggca tggagggacc ctcgccgctc accgaacgcc gcctctcctc gattgtgccg 2461 cctccctggc tgcaggccaa caagcagagc cacgtcagcg tcttcgccac cacgcccgag 2521 gagggaccgg ccagctcgcc cctgcaactg ggcaacgagc tgtccgtccg cgagaacatc 2581 tatccggtgg atccgcacca cagccgctcg gcgatcgaca gacgcagcga gtttgtgcgc 2641 cagcaagaga tgcccaaaat tctcatacaa cgccatcgtg ccgaaaccaa tttcgcggac 2701 acagaggtcg aggagctgat tgcgatgctg cgcgaaacgg agaatctcga ggagcagggc 2761 gacatcctgc agtacctggt ggacacccag ggcctggact tcaacacagc tggcctggga 2821 ttcaagaaca aatcggacga caatgcgacc ccaaatgcca atggtgcagc cgccggaatg 2881 ctggaggagg gacgcgtggt gaccgtgcgg gatctgttga agggactcta cgagaaggcc 2941 tgccagcaga agctctgggg actcgtccgc cacacggccg ggatgctggg caagcgggtg 3001 gaggatctgg ccaaggcggt caccgatctg ctggtgcgcc agaagcaggt caccgtggga 3061 atgccgccga acaatgagca caccatcacg gcgccgctgc cggaagtcga gctgcgacag 3121 ctcatccatg atgcctatgg cgacgatgag agcactgcga tgctcaccca ggagctgatg 3181 gtctacctgg ccatgttcat tcgcaccgag ccgcagctgt tccacgagat gctgcgcctg 3241 cgcgtcggcc tgatcatcca ggtgatggcc aaggagctgt cccgcaccct caactgcgac 3301 ggcgaggcgg cgtcggagca tttacttaac ctctcgccct tcgagatgaa gaatctcctc 3361 taccacatac tcagcggcaa ggagtttgca gtcagcagtg tggcccgtgg caatctgtcc 3421 attgttagct gcaagagcag ccgcgtcagc aagaagagcc aaatcggtct gggcgatccg 3481 gagggcgagg acgctttaat agccaccatt gacgaccggc agggacagtg gctgcgtcgc 3541 aggcgactgg atggcgccct gaatcgtgtg ccccgtgact tttattcgcg cgtttggacc 3601 gttttggaga agtgccaggg tctggccatc gagggacgcg tcctgcagca gagtctcacc 3661 caggagatga cgccgggcga actgaagttc gccctcgaag tggagacggc cctcaatcag 3721 ataccgcagc ccgagtacag gcagctggtg gtggaggccc tgatggtgct caccctcgtc 3781 accgagcaca acatggtgcc cactctcggg ggcatcatct acgtggagca tctggtgcac 3841 aaggccaacc agctgttcct cgaggaccag cgcaaggtgc agggcgatgc cacgctgtgc 3901 tgcgccaaga tcaaggacgg caaggagcag cagcaggccg cctcggggat gctgctgtgc 3961 ggcggcgccg cctacatatg ccagcacctc tacgacagtg ctcccagcgg cagctacgga 4021 accatgacct acatgtcccg ggcggtggcc ctggtgctcg actgtgtgcc caagcacggc 4081 gagatggagt gcgccatctc ctgaagcggc gggcctccac ttaatgtaat gccaaaatct 4141 ctagctctgc aactctggat acgtccgttc tcgttctcgc ttagccccgt ctcgctttct 4201 ctcgatcctg tcctgcattt ttttgttttt cccagcctct gacccaaaat gtatatattc 4261 tttgacccga aaacctgttt gttctgaccg aaaacgaagg cagaattaag aagccaatcg 4321 aatggtatta gcccacttat gtgtgtgtgt tgaccctttg gaaggatact ccaaaagccc 4381 cccccccaaa aacagatccc tatcccaatc ctaaaccatt tggaaagcca acagtacaga 4441 tttgtttttt gtacttgcgg acgacacttt tgattgtttt aacttttata tttttaactg 4501 accctatttt atattatacg tttgaattgt aaagttgaac gcgcagcaag atttacaata 4561 aaaatgtgtt tgcaatgtt