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LOCUS XM_017155710 4585 bp mRNA linear INV 09-DEC-2024 regulatory subunit alpha (LOC108066922), transcript variant X7, mRNA. ACCESSION XM_017155710 VERSION XM_017155710.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017155710.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4585 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..4585 /gene="LOC108066922" /note="probable phosphorylase b kinase regulatory subunit alpha; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108066922" CDS 349..4110 /gene="LOC108066922" /codon_start=1 /product="probable phosphorylase b kinase regulatory subunit alpha isoform X7" /protein_id="XP_017011199.1" /db_xref="GeneID:108066922" /translation="MRSRSNSGVRLDYYQRIVHRLILAHQEPVTGLFPASNVNSHAWI RDNVYCILAVWGLSMAYKKIADQDEDRAKCYELEQSCVKLMRGLLMAMMNQKDKVEKF KMTQSPYDSLHAKYSSKNGLPVVGDNEWGHLQIDAVSLYLLILAQMTASGLQIVFSLD EVSFIQNLVFYIESAYSIPDYGIWERGDKTNHGEPELNASSIGMAKAALEAMNELDLF GARGGPASVIHVLADEAHKCQAVLQSMLPRESNSKELDSGLLCVIGFPAFAVDDAQLI HNTKDAILSRLQGKYGCKRFLRDGYRTPKEDPSRLYYERWELRMFENIECEWPLFYCY LILFHAFQSDKRAVEEYAGRLEKIMVRSEDGILLVPESYAVPQDLVGFEYQKPGSQAR EVVGRCPFLWGQSLFILGRLLQEGFLAVGELDPLNRRLGAQKKPDVVVQVVIIAEDNE IRDKLAEHDLHVQTIAEVAPIEVQPARVLSHLYTYLGRNRKLGLSGRKSRDVGILSTS KLYSLKDRIFAFTPQHIDYEEYYTTRDPDLLASNFTTNLAFLTNNWRHMLGRPTITLM ATHYMLDQDKIPLAMIQTMRKLKSGYINGTRVMLGSLKDFLNTSAITDLSFLGSTEDG YPDRLHPDVQTYLDEHLLRSFSNRSTMNLRGGQLRPRTLRRRMSCKGAIKKTRSINVD SDNLGMEGPSPLTERRLSSIVPPPWLQANKQSHVSVFATTPEEGPASSPLQLGNELSV RENIYPVDPHHSRSAIDRRSEFVRQQEITVPKILIQRHRAETNFADTEVEELIAMLRE TENLEEQGDILQYLVDTQGLDFNTAGLGFKNKSDDNATPNANGAAAGMLEEGRVVTVR DLLKGLYEKACQQKLWGLVRHTAGMLGKRVEDLAKAVTDLLVRQKQVTVGMPPNNEHT ITAPLPEVELRQLIHDAYGDDESTAMLTQELMVYLAMFIRTEPQLFHEMLRLRVGLII QVMAKELSRTLNCDGEAASEHLLNLSPFEMKNLLYHILSGKEFAVSSVARGNLSIVSC KSSRVSKKSQIGLGDPEGEDALIATIDDRQGQWLRRRRLDGALNRVPRDFYSRVWTVL EKCQGLAIEGRVLQQSLTQEMTPGELKFALEVETALNQIPQPEYRQLVVEALMVLTLV TEHNMVPTLGGIIYVEHLVHKANQLFLEDQRKVQGDATLCCAKIKDGKEQQQAASGML LCGGAAYICQHLYDSAPSGSYGTMTYMSRAVALVLDCVPKHGEMECAIS" misc_feature 370..>1665 /gene="LOC108066922" /note="Glycosyl hydrolases family 15; Region: Glyco_hydro_15; pfam00723" /db_xref="CDD:395586" misc_feature <2908..3258 /gene="LOC108066922" /note="Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain; Region: Bac_rhamnosid6H; cl46875" /db_xref="CDD:481215" misc_feature 3289..>3813 /gene="LOC108066922" /note="Phosphorylase b kinase C-terminal domain; Region: KPBB_C; pfam19292" /db_xref="CDD:437124" polyA_site 4585 /gene="LOC108066922" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 caacgctgcc ggcagaaata tcgataaatt gaattgacat tgagttgact ttaggtgcat 61 tttaacgaca atatatctcg atttattcgc aaacaagtga ccagccaggc ttcgaaacgc 121 gaacggcagc caagcgccac tccctcctcc gaatcccgga gagaatgcgc tgtcctcgcg 181 gcgaactgaa cgcattctac gggttctagc ggcgcgaggt gttccgggga gctctgggct 241 tcctcctcct ccactccgcc gaacggaacc acaacaaaac gatccgaagc gatcccaacc 301 gatccgatcc aatccgatcc gacattataa accacctcga aaacggccat gcgttcccgc 361 agcaattcgg gcgtccggtt ggactactac cagcgcatcg tgcaccgtct gatcttggcc 421 caccaggagc cggtcaccgg tctgttcccc gcctccaatg tcaactcaca cgcctggatc 481 agggacaatg tgtactgcat cctggccgtc tggggcctgt ccatggccta caagaagatc 541 gccgaccagg acgaggaccg ggccaagtgc tatgagctcg agcagagctg cgtgaagctg 601 atgcgcggcc tgctcatggc catgatgaac cagaaggaca aggtggagaa gttcaagatg 661 acccagagtc cctacgactc cctccacgcc aagtactcga gcaagaacgg cctgcccgtc 721 gtcggcgaca atgagtgggg ccatctgcag atcgatgccg tctccctgta cctgctgatc 781 ctggcccaga tgacggcctc cggtctgcag atcgtcttct ccctggacga ggtgtcgttc 841 atccagaatc tggtcttcta cattgagtcc gcctactcca ttccggacta cggaatatgg 901 gaacgcggcg acaagaccaa tcatggcgag cccgagttga atgccagctc cattggcatg 961 gccaaggcgg cgctggaggc gatgaacgag ctggatctgt tcggggcgcg cggcgggccg 1021 gccagtgtga tccatgtgct ggccgacgag gcccacaaat gccaggcggt gctccagtcg 1081 atgctgccgc gtgagtccaa cagcaaggag ctggactcgg gactgctctg tgtcattgga 1141 tttccggcct ttgccgtcga cgatgcccag ctgatacaca acaccaagga tgcgatattg 1201 tcgcgactgc agggcaagta cggctgcaag cggttcctgc gcgacggcta ccgcactccc 1261 aaggaggatc catcgcggct ctactacgaa cgctgggagc tgcgcatgtt cgagaacatc 1321 gagtgcgagt ggccgctctt ctactgctac ctgattctct tccacgcctt ccagagcgac 1381 aagcgggcgg tggaggagta cgccggccgg ctggagaaga tcatggtgcg ctcggaggat 1441 ggcatactgc tcgtgccgga gagctatgcg gtgccgcagg atctggtggg cttcgagtac 1501 cagaagccgg gatcgcaggc ccgcgaagtg gtcggtcgct gcccgttcct gtggggccag 1561 tccctgttta tcctcggccg cttgctgcag gagggcttct tggccgtggg cgagctggat 1621 ccgctgaatc gtcgcctggg cgcgcaaaag aaacccgatg tggtcgtcca ggtggtcatc 1681 attgccgagg acaacgagat ccgcgacaag ctggccgagc acgatctgca tgtgcagaca 1741 atcgccgagg tggctcccat tgaggtgcag ccagcccgtg ttttgagtca cctgtacacc 1801 tacctcgggc gcaaccgcaa gctgggtttg agcggcagga agtcccgcga tgtgggcatt 1861 ctcagcacca gcaagttgta ctcgctgaag gatcgcatat tcgctttcac cccgcagcat 1921 atcgactatg aagaatatta tacaacacgc gatcccgatt tgcttgccag caattttacc 1981 acaaatttag cattcttgac caacaattgg cgtcacatgt tgggcaggcc gacaatcaca 2041 ctaatggcaa cccactatat gctagatcag gacaagattc cgctggccat gatccagacg 2101 atgcggaaac tcaagtcggg ctacatcaac gggacgcgcg tgatgctggg cagcctgaag 2161 gacttcctca acacctcggc catcacggac ctgagcttcc tgggcagcac ggaggatggc 2221 tatccggatc gcctgcatcc ggacgtgcag acgtacctcg acgagcacct gctgcgctcg 2281 ttcagcaacc gcagcacaat gaatctgcgc ggcggacagc tgcgtccgcg gaccctcagg 2341 cgccgcatgt cctgcaaggg agcgatcaag aagacgcgct cgatcaacgt ggattccgac 2401 aacctcggca tggagggacc ctcgccgctc accgaacgcc gcctctcctc gattgtgccg 2461 cctccctggc tgcaggccaa caagcagagc cacgtcagcg tcttcgccac cacgcccgag 2521 gagggaccgg ccagctcgcc cctgcaactg ggcaacgagc tgtccgtccg cgagaacatc 2581 tatccggtgg atccgcacca cagccgctcg gcgatcgaca gacgcagcga gtttgtgcgc 2641 cagcaagaga taacagtgcc caaaattctc atacaacgcc atcgtgccga aaccaatttc 2701 gcggacacag aggtcgagga gctgattgcg atgctgcgcg aaacggagaa tctcgaggag 2761 cagggcgaca tcctgcagta cctggtggac acccagggcc tggacttcaa cacagctggc 2821 ctgggattca agaacaaatc ggacgacaat gcgaccccaa atgccaatgg tgcagccgcc 2881 ggaatgctgg aggagggacg cgtggtgacc gtgcgggatc tgttgaaggg actctacgag 2941 aaggcctgcc agcagaagct ctggggactc gtccgccaca cggccgggat gctgggcaag 3001 cgggtggagg atctggccaa ggcggtcacc gatctgctgg tgcgccagaa gcaggtcacc 3061 gtgggaatgc cgccgaacaa tgagcacacc atcacggcgc cgctgccgga agtcgagctg 3121 cgacagctca tccatgatgc ctatggcgac gatgagagca ctgcgatgct cacccaggag 3181 ctgatggtct acctggccat gttcattcgc accgagccgc agctgttcca cgagatgctg 3241 cgcctgcgcg tcggcctgat catccaggtg atggccaagg agctgtcccg caccctcaac 3301 tgcgacggcg aggcggcgtc ggagcattta cttaacctct cgcccttcga gatgaagaat 3361 ctcctctacc acatactcag cggcaaggag tttgcagtca gcagtgtggc ccgtggcaat 3421 ctgtccattg ttagctgcaa gagcagccgc gtcagcaaga agagccaaat cggtctgggc 3481 gatccggagg gcgaggacgc tttaatagcc accattgacg accggcaggg acagtggctg 3541 cgtcgcaggc gactggatgg cgccctgaat cgtgtgcccc gtgactttta ttcgcgcgtt 3601 tggaccgttt tggagaagtg ccagggtctg gccatcgagg gacgcgtcct gcagcagagt 3661 ctcacccagg agatgacgcc gggcgaactg aagttcgccc tcgaagtgga gacggccctc 3721 aatcagatac cgcagcccga gtacaggcag ctggtggtgg aggccctgat ggtgctcacc 3781 ctcgtcaccg agcacaacat ggtgcccact ctcgggggca tcatctacgt ggagcatctg 3841 gtgcacaagg ccaaccagct gttcctcgag gaccagcgca aggtgcaggg cgatgccacg 3901 ctgtgctgcg ccaagatcaa ggacggcaag gagcagcagc aggccgcctc ggggatgctg 3961 ctgtgcggcg gcgccgccta catatgccag cacctctacg acagtgctcc cagcggcagc 4021 tacggaacca tgacctacat gtcccgggcg gtggccctgg tgctcgactg tgtgcccaag 4081 cacggcgaga tggagtgcgc catctcctga agcggcgggc ctccacttaa tgtaatgcca 4141 aaatctctag ctctgcaact ctggatacgt ccgttctcgt tctcgcttag ccccgtctcg 4201 ctttctctcg atcctgtcct gcattttttt gtttttccca gcctctgacc caaaatgtat 4261 atattctttg acccgaaaac ctgtttgttc tgaccgaaaa cgaaggcaga attaagaagc 4321 caatcgaatg gtattagccc acttatgtgt gtgtgttgac cctttggaag gatactccaa 4381 aagccccccc cccaaaaaca gatccctatc ccaatcctaa accatttgga aagccaacag 4441 tacagatttg ttttttgtac ttgcggacga cacttttgat tgttttaact tttatatttt 4501 taactgaccc tattttatat tatacgtttg aattgtaaag ttgaacgcgc agcaagattt 4561 acaataaaaa tgtgtttgca atgtt