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LOCUS XM_017155707 4735 bp mRNA linear INV 09-DEC-2024 regulatory subunit alpha (LOC108066922), transcript variant X6, mRNA. ACCESSION XM_017155707 VERSION XM_017155707.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017155707.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4735 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..4735 /gene="LOC108066922" /note="probable phosphorylase b kinase regulatory subunit alpha; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:108066922" CDS 349..4260 /gene="LOC108066922" /codon_start=1 /product="probable phosphorylase b kinase regulatory subunit alpha isoform X6" /protein_id="XP_017011196.2" /db_xref="GeneID:108066922" /translation="MRSRSNSGVRLDYYQRIVHRLILAHQEPVTGLFPASNVNSHAWI RDNVYCILAVWGLSMAYKKIADQDEDRAKCYELEQSCVKLMRGLLMAMMNQKDKVEKF KMTQSPYDSLHAKYSSKNGLPVVGDNEWGHLQIDAVSLYLLILAQMTASGLQIVFSLD EVSFIQNLVFYIESAYSIPDYGIWERGDKTNHGEPELNASSIGMAKAALEAMNELDLF GARGGPASVIHVLADEAHKCQAVLQSMLPRESNSKELDSGLLCVIGFPAFAVDDAQLI HNTKDAILSRLQGKYGCKRFLRDGYRTPKEDPSRLYYERWELRMFENIECEWPLFYCY LILFHAFQSDKRAVEEYAGRLEKIMVRSEDGILLVPESYAVPQDLVGFEYQKPGSQAR EVVGRCPFLWGQSLFILGRLLQEGFLAVGELDPLNRRLGAQKKPDVVVQVVIIAEDNE IRDKLAEHDLHVQTIAEVAPIEVQPARVLSHLYTYLGRNRKLGLSGRKSRDVGILSTS KLYSLKDRIFAFTPQHIDYEEYYTTRDPDLLASNFTTNLAFLTNNWRHMLGRPTITLM ATHYMLDQDKIPLAMIQTMRKLKSGYINGTRVMLGSLKDFLNTSAITDLSFLGSTEDG YPDRLHPDVQTYLDEHLLRSFSNRSTMNLRGGQLRPRTLRRRMSCKGAIKKTRSINVD SDNLGMEGPSPLTERRLSSIVPPPWLQANKQSHVSVFATTPEEGPASSPLQLGNELSV RENIYPVDPHHSRSAIDRRSEFVRQQEITVPKILIQRHRAETNFADTEVEELIAMLRE TENLEEQGDILQYLVDTQGLDFNTAGLGFKNKSDDNATPNANGAAAASAAATSTDPDH NNPASNCNSNSSNNTSSSNTNNHMSPHENNNNDSSQSEGMLEEGRVVTVRDLLKGLYE KACQQKLWGLVRHTAGMLGKRVEDLAKAVTDLLVRQKQVTVGMPPNNEHTITAPLPEV ELRQLIHDAYGDDESTAMLTQELMVYLAMFIRTEPQLFHEMLRLRVGLIIQVMAKELS RTLNCDGEAASEHLLNLSPFEMKNLLYHILSGKEFAVSSVARGNLSIVSCKSSRVSKK SQIGLGDPEGEDALIATIDDRQGQWLRRRRLDGALNRVPRDFYSRVWTVLEKCQGLAI EGRVLQQSLTQEMTPGELKFALEVETALNQIPQPEYRQLVVEALMVLTLVTEHNMVPT LGGIIYVEHLVHKANQLFLEDQRKVQGDATLCCAKIKDGKEQQQAASGMLLCGGAAYI CQHLYDSAPSGSYGTMTYMSRAVALVLDCVPKHGEMECAIS" misc_feature 370..>1665 /gene="LOC108066922" /note="Glycosyl hydrolases family 15; Region: Glyco_hydro_15; pfam00723" /db_xref="CDD:395586" misc_feature <3058..3408 /gene="LOC108066922" /note="Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain; Region: Bac_rhamnosid6H; cl46875" /db_xref="CDD:481215" misc_feature 3439..>3963 /gene="LOC108066922" /note="Phosphorylase b kinase C-terminal domain; Region: KPBB_C; pfam19292" /db_xref="CDD:437124" polyA_site 4735 /gene="LOC108066922" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 caacgctgcc ggcagaaata tcgataaatt gaattgacat tgagttgact ttaggtgcat 61 tttaacgaca atatatctcg atttattcgc aaacaagtga ccagccaggc ttcgaaacgc 121 gaacggcagc caagcgccac tccctcctcc gaatcccgga gagaatgcgc tgtcctcgcg 181 gcgaactgaa cgcattctac gggttctagc ggcgcgaggt gttccgggga gctctgggct 241 tcctcctcct ccactccgcc gaacggaacc acaacaaaac gatccgaagc gatcccaacc 301 gatccgatcc aatccgatcc gacattataa accacctcga aaacggccat gcgttcccgc 361 agcaattcgg gcgtccggtt ggactactac cagcgcatcg tgcaccgtct gatcttggcc 421 caccaggagc cggtcaccgg tctgttcccc gcctccaatg tcaactcaca cgcctggatc 481 agggacaatg tgtactgcat cctggccgtc tggggcctgt ccatggccta caagaagatc 541 gccgaccagg acgaggaccg ggccaagtgc tatgagctcg agcagagctg cgtgaagctg 601 atgcgcggcc tgctcatggc catgatgaac cagaaggaca aggtggagaa gttcaagatg 661 acccagagtc cctacgactc cctccacgcc aagtactcga gcaagaacgg cctgcccgtc 721 gtcggcgaca atgagtgggg ccatctgcag atcgatgccg tctccctgta cctgctgatc 781 ctggcccaga tgacggcctc cggtctgcag atcgtcttct ccctggacga ggtgtcgttc 841 atccagaatc tggtcttcta cattgagtcc gcctactcca ttccggacta cggaatatgg 901 gaacgcggcg acaagaccaa tcatggcgag cccgagttga atgccagctc cattggcatg 961 gccaaggcgg cgctggaggc gatgaacgag ctggatctgt tcggggcgcg cggcgggccg 1021 gccagtgtga tccatgtgct ggccgacgag gcccacaaat gccaggcggt gctccagtcg 1081 atgctgccgc gtgagtccaa cagcaaggag ctggactcgg gactgctctg tgtcattgga 1141 tttccggcct ttgccgtcga cgatgcccag ctgatacaca acaccaagga tgcgatattg 1201 tcgcgactgc agggcaagta cggctgcaag cggttcctgc gcgacggcta ccgcactccc 1261 aaggaggatc catcgcggct ctactacgaa cgctgggagc tgcgcatgtt cgagaacatc 1321 gagtgcgagt ggccgctctt ctactgctac ctgattctct tccacgcctt ccagagcgac 1381 aagcgggcgg tggaggagta cgccggccgg ctggagaaga tcatggtgcg ctcggaggat 1441 ggcatactgc tcgtgccgga gagctatgcg gtgccgcagg atctggtggg cttcgagtac 1501 cagaagccgg gatcgcaggc ccgcgaagtg gtcggtcgct gcccgttcct gtggggccag 1561 tccctgttta tcctcggccg cttgctgcag gagggcttct tggccgtggg cgagctggat 1621 ccgctgaatc gtcgcctggg cgcgcaaaag aaacccgatg tggtcgtcca ggtggtcatc 1681 attgccgagg acaacgagat ccgcgacaag ctggccgagc acgatctgca tgtgcagaca 1741 atcgccgagg tggctcccat tgaggtgcag ccagcccgtg ttttgagtca cctgtacacc 1801 tacctcgggc gcaaccgcaa gctgggtttg agcggcagga agtcccgcga tgtgggcatt 1861 ctcagcacca gcaagttgta ctcgctgaag gatcgcatat tcgctttcac cccgcagcat 1921 atcgactatg aagaatatta tacaacacgc gatcccgatt tgcttgccag caattttacc 1981 acaaatttag cattcttgac caacaattgg cgtcacatgt tgggcaggcc gacaatcaca 2041 ctaatggcaa cccactatat gctagatcag gacaagattc cgctggccat gatccagacg 2101 atgcggaaac tcaagtcggg ctacatcaac gggacgcgcg tgatgctggg cagcctgaag 2161 gacttcctca acacctcggc catcacggac ctgagcttcc tgggcagcac ggaggatggc 2221 tatccggatc gcctgcatcc ggacgtgcag acgtacctcg acgagcacct gctgcgctcg 2281 ttcagcaacc gcagcacaat gaatctgcgc ggcggacagc tgcgtccgcg gaccctcagg 2341 cgccgcatgt cctgcaaggg agcgatcaag aagacgcgct cgatcaacgt ggattccgac 2401 aacctcggca tggagggacc ctcgccgctc accgaacgcc gcctctcctc gattgtgccg 2461 cctccctggc tgcaggccaa caagcagagc cacgtcagcg tcttcgccac cacgcccgag 2521 gagggaccgg ccagctcgcc cctgcaactg ggcaacgagc tgtccgtccg cgagaacatc 2581 tatccggtgg atccgcacca cagccgctcg gcgatcgaca gacgcagcga gtttgtgcgc 2641 cagcaagaga taacagtgcc caaaattctc atacaacgcc atcgtgccga aaccaatttc 2701 gcggacacag aggtcgagga gctgattgcg atgctgcgcg aaacggagaa tctcgaggag 2761 cagggcgaca tcctgcagta cctggtggac acccagggcc tggacttcaa cacagctggc 2821 ctgggattca agaacaaatc ggacgacaat gcgaccccaa atgccaatgg tgcagccgcc 2881 gcctcagccg ccgccactag caccgatccg gatcataata atccagccag caattgcaac 2941 agcaacagca gcaacaacac cagcagcagc aacaccaaca accacatgag cccacatgag 3001 aataacaaca acgattcttc ccaatccgaa ggaatgctgg aggagggacg cgtggtgacc 3061 gtgcgggatc tgttgaaggg actctacgag aaggcctgcc agcagaagct ctggggactc 3121 gtccgccaca cggccgggat gctgggcaag cgggtggagg atctggccaa ggcggtcacc 3181 gatctgctgg tgcgccagaa gcaggtcacc gtgggaatgc cgccgaacaa tgagcacacc 3241 atcacggcgc cgctgccgga agtcgagctg cgacagctca tccatgatgc ctatggcgac 3301 gatgagagca ctgcgatgct cacccaggag ctgatggtct acctggccat gttcattcgc 3361 accgagccgc agctgttcca cgagatgctg cgcctgcgcg tcggcctgat catccaggtg 3421 atggccaagg agctgtcccg caccctcaac tgcgacggcg aggcggcgtc ggagcattta 3481 cttaacctct cgcccttcga gatgaagaat ctcctctacc acatactcag cggcaaggag 3541 tttgcagtca gcagtgtggc ccgtggcaat ctgtccattg ttagctgcaa gagcagccgc 3601 gtcagcaaga agagccaaat cggtctgggc gatccggagg gcgaggacgc tttaatagcc 3661 accattgacg accggcaggg acagtggctg cgtcgcaggc gactggatgg cgccctgaat 3721 cgtgtgcccc gtgactttta ttcgcgcgtt tggaccgttt tggagaagtg ccagggtctg 3781 gccatcgagg gacgcgtcct gcagcagagt ctcacccagg agatgacgcc gggcgaactg 3841 aagttcgccc tcgaagtgga gacggccctc aatcagatac cgcagcccga gtacaggcag 3901 ctggtggtgg aggccctgat ggtgctcacc ctcgtcaccg agcacaacat ggtgcccact 3961 ctcgggggca tcatctacgt ggagcatctg gtgcacaagg ccaaccagct gttcctcgag 4021 gaccagcgca aggtgcaggg cgatgccacg ctgtgctgcg ccaagatcaa ggacggcaag 4081 gagcagcagc aggccgcctc ggggatgctg ctgtgcggcg gcgccgccta catatgccag 4141 cacctctacg acagtgctcc cagcggcagc tacggaacca tgacctacat gtcccgggcg 4201 gtggccctgg tgctcgactg tgtgcccaag cacggcgaga tggagtgcgc catctcctga 4261 agcggcgggc ctccacttaa tgtaatgcca aaatctctag ctctgcaact ctggatacgt 4321 ccgttctcgt tctcgcttag ccccgtctcg ctttctctcg atcctgtcct gcattttttt 4381 gtttttccca gcctctgacc caaaatgtat atattctttg acccgaaaac ctgtttgttc 4441 tgaccgaaaa cgaaggcaga attaagaagc caatcgaatg gtattagccc acttatgtgt 4501 gtgtgttgac cctttggaag gatactccaa aagccccccc cccaaaaaca gatccctatc 4561 ccaatcctaa accatttgga aagccaacag tacagatttg ttttttgtac ttgcggacga 4621 cacttttgat tgttttaact tttatatttt taactgaccc tattttatat tatacgtttg 4681 aattgtaaag ttgaacgcgc agcaagattt acaataaaaa tgtgtttgca atgtt