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LOCUS XM_017155705 4882 bp mRNA linear INV 09-DEC-2024 regulatory subunit alpha (LOC108066922), transcript variant X4, mRNA. ACCESSION XM_017155705 VERSION XM_017155705.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017155705.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4882 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..4882 /gene="LOC108066922" /note="probable phosphorylase b kinase regulatory subunit alpha; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108066922" CDS 349..4407 /gene="LOC108066922" /codon_start=1 /product="probable phosphorylase b kinase regulatory subunit alpha isoform X4" /protein_id="XP_017011194.2" /db_xref="GeneID:108066922" /translation="MRSRSNSGVRLDYYQRIVHRLILAHQEPVTGLFPASNVNSHAWI RDNVYCILAVWGLSMAYKKIADQDEDRAKCYELEQSCVKLMRGLLMAMMNQKDKVEKF KMTQSPYDSLHAKYSSKNGLPVVGDNEWGHLQIDAVSLYLLILAQMTASGLQIVFSLD EVSFIQNLVFYIESAYSIPDYGIWERGDKTNHGEPELNASSIGMAKAALEAMNELDLF GARGGPASVIHVLADEAHKCQAVLQSMLPRESNSKELDSGLLCVIGFPAFAVDDAQLI HNTKDAILSRLQGKYGCKRFLRDGYRTPKEDPSRLYYERWELRMFENIECEWPLFYCY LILFHAFQSDKRAVEEYAGRLEKIMVRSEDGILLVPESYAVPQDLVGFEYQKPGSQAR EVVGRCPFLWGQSLFILGRLLQEGFLAVGELDPLNRRLGAQKKPDVVVQVVIIAEDNE IRDKLAEHDLHVQTIAEVAPIEVQPARVLSHLYTYLGRNRKLGLSGRKSRDVGILSTS KLYSLKDRIFAFTPQFADLSRFYIASDNELMIDILKGEINFLKSAWDLLGRPLVTLVL KRIHLDQDKIPLAMIQTMRKLKSGYINGTRVMLGSLKDFLNTSAITDLSFLGSTEDGY PDRLHPDVQTYLDEHLLRSFSNRSTMNLRGGQLRPRTLRRRMSCKGAIKKTRSINVDS DNLGMEGPSPLTERRLSSIVPPPWLQANKQSHVSVFATTPEEGPASSPLQLGNELSVR ENIYPVDPHHSRSAIDRRSEFVRQQEMPKILIQRHRAETNFADTEVEELIAMLRETEN LEEQGDILQYLVDTQGLDFNTAGLGFKNKSDDNATPNANGAAAELEQAFVDEVVLELA GGGAGGAAGGGGGAGEGSKKSPTLVLPTVIIDAATISASAAATSTDPDHNNPASNCNS NSSNNTSSSNTNNHMSPHENNNNDSSQSEGMLEEGRVVTVRDLLKGLYEKACQQKLWG LVRHTAGMLGKRVEDLAKAVTDLLVRQKQVTVGMPPNNEHTITAPLPEVELRQLIHDA YGDDESTAMLTQELMVYLAMFIRTEPQLFHEMLRLRVGLIIQVMAKELSRTLNCDGEA ASEHLLNLSPFEMKNLLYHILSGKEFAVSSVARGNLSIVSCKSSRVSKKSQIGLGDPE GEDALIATIDDRQGQWLRRRRLDGALNRVPRDFYSRVWTVLEKCQGLAIEGRVLQQSL TQEMTPGELKFALEVETALNQIPQPEYRQLVVEALMVLTLVTEHNMVPTLGGIIYVEH LVHKANQLFLEDQRKVQGDATLCCAKIKDGKEQQQAASGMLLCGGAAYICQHLYDSAP SGSYGTMTYMSRAVALVLDCVPKHGEMECAIS" misc_feature 370..>1665 /gene="LOC108066922" /note="Glycosyl hydrolases family 15; Region: Glyco_hydro_15; pfam00723" /db_xref="CDD:395586" misc_feature <3205..3555 /gene="LOC108066922" /note="Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain; Region: Bac_rhamnosid6H; cl46875" /db_xref="CDD:481215" misc_feature 3586..>4110 /gene="LOC108066922" /note="Phosphorylase b kinase C-terminal domain; Region: KPBB_C; pfam19292" /db_xref="CDD:437124" polyA_site 4882 /gene="LOC108066922" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 caacgctgcc ggcagaaata tcgataaatt gaattgacat tgagttgact ttaggtgcat 61 tttaacgaca atatatctcg atttattcgc aaacaagtga ccagccaggc ttcgaaacgc 121 gaacggcagc caagcgccac tccctcctcc gaatcccgga gagaatgcgc tgtcctcgcg 181 gcgaactgaa cgcattctac gggttctagc ggcgcgaggt gttccgggga gctctgggct 241 tcctcctcct ccactccgcc gaacggaacc acaacaaaac gatccgaagc gatcccaacc 301 gatccgatcc aatccgatcc gacattataa accacctcga aaacggccat gcgttcccgc 361 agcaattcgg gcgtccggtt ggactactac cagcgcatcg tgcaccgtct gatcttggcc 421 caccaggagc cggtcaccgg tctgttcccc gcctccaatg tcaactcaca cgcctggatc 481 agggacaatg tgtactgcat cctggccgtc tggggcctgt ccatggccta caagaagatc 541 gccgaccagg acgaggaccg ggccaagtgc tatgagctcg agcagagctg cgtgaagctg 601 atgcgcggcc tgctcatggc catgatgaac cagaaggaca aggtggagaa gttcaagatg 661 acccagagtc cctacgactc cctccacgcc aagtactcga gcaagaacgg cctgcccgtc 721 gtcggcgaca atgagtgggg ccatctgcag atcgatgccg tctccctgta cctgctgatc 781 ctggcccaga tgacggcctc cggtctgcag atcgtcttct ccctggacga ggtgtcgttc 841 atccagaatc tggtcttcta cattgagtcc gcctactcca ttccggacta cggaatatgg 901 gaacgcggcg acaagaccaa tcatggcgag cccgagttga atgccagctc cattggcatg 961 gccaaggcgg cgctggaggc gatgaacgag ctggatctgt tcggggcgcg cggcgggccg 1021 gccagtgtga tccatgtgct ggccgacgag gcccacaaat gccaggcggt gctccagtcg 1081 atgctgccgc gtgagtccaa cagcaaggag ctggactcgg gactgctctg tgtcattgga 1141 tttccggcct ttgccgtcga cgatgcccag ctgatacaca acaccaagga tgcgatattg 1201 tcgcgactgc agggcaagta cggctgcaag cggttcctgc gcgacggcta ccgcactccc 1261 aaggaggatc catcgcggct ctactacgaa cgctgggagc tgcgcatgtt cgagaacatc 1321 gagtgcgagt ggccgctctt ctactgctac ctgattctct tccacgcctt ccagagcgac 1381 aagcgggcgg tggaggagta cgccggccgg ctggagaaga tcatggtgcg ctcggaggat 1441 ggcatactgc tcgtgccgga gagctatgcg gtgccgcagg atctggtggg cttcgagtac 1501 cagaagccgg gatcgcaggc ccgcgaagtg gtcggtcgct gcccgttcct gtggggccag 1561 tccctgttta tcctcggccg cttgctgcag gagggcttct tggccgtggg cgagctggat 1621 ccgctgaatc gtcgcctggg cgcgcaaaag aaacccgatg tggtcgtcca ggtggtcatc 1681 attgccgagg acaacgagat ccgcgacaag ctggccgagc acgatctgca tgtgcagaca 1741 atcgccgagg tggctcccat tgaggtgcag ccagcccgtg ttttgagtca cctgtacacc 1801 tacctcgggc gcaaccgcaa gctgggtttg agcggcagga agtcccgcga tgtgggcatt 1861 ctcagcacca gcaagttgta ctcgctgaag gatcgcatat tcgctttcac cccgcagttc 1921 gccgacctgt cgcgcttcta tatcgcctcc gataacgaac tcatgatcga catcctcaag 1981 ggcgagataa atttcctcaa gtccgcttgg gatctgctgg gtcgtccgct ggtcaccctg 2041 gtgctgaagc gcatccacct agatcaggac aagattccgc tggccatgat ccagacgatg 2101 cggaaactca agtcgggcta catcaacggg acgcgcgtga tgctgggcag cctgaaggac 2161 ttcctcaaca cctcggccat cacggacctg agcttcctgg gcagcacgga ggatggctat 2221 ccggatcgcc tgcatccgga cgtgcagacg tacctcgacg agcacctgct gcgctcgttc 2281 agcaaccgca gcacaatgaa tctgcgcggc ggacagctgc gtccgcggac cctcaggcgc 2341 cgcatgtcct gcaagggagc gatcaagaag acgcgctcga tcaacgtgga ttccgacaac 2401 ctcggcatgg agggaccctc gccgctcacc gaacgccgcc tctcctcgat tgtgccgcct 2461 ccctggctgc aggccaacaa gcagagccac gtcagcgtct tcgccaccac gcccgaggag 2521 ggaccggcca gctcgcccct gcaactgggc aacgagctgt ccgtccgcga gaacatctat 2581 ccggtggatc cgcaccacag ccgctcggcg atcgacagac gcagcgagtt tgtgcgccag 2641 caagagatgc ccaaaattct catacaacgc catcgtgccg aaaccaattt cgcggacaca 2701 gaggtcgagg agctgattgc gatgctgcgc gaaacggaga atctcgagga gcagggcgac 2761 atcctgcagt acctggtgga cacccagggc ctggacttca acacagctgg cctgggattc 2821 aagaacaaat cggacgacaa tgcgacccca aatgccaatg gtgcagccgc cgagctcgag 2881 caggcgtttg tggatgaggt ggtgctggaa ctggctggtg gtggtgcagg tggtgcagca 2941 ggaggaggcg gcggagcagg tgaagggtcc aagaagagtc caacgcttgt gctgcccacg 3001 gtgatcatcg atgctgctac aatttcagcc tcagccgccg ccactagcac cgatccggat 3061 cataataatc cagccagcaa ttgcaacagc aacagcagca acaacaccag cagcagcaac 3121 accaacaacc acatgagccc acatgagaat aacaacaacg attcttccca atccgaagga 3181 atgctggagg agggacgcgt ggtgaccgtg cgggatctgt tgaagggact ctacgagaag 3241 gcctgccagc agaagctctg gggactcgtc cgccacacgg ccgggatgct gggcaagcgg 3301 gtggaggatc tggccaaggc ggtcaccgat ctgctggtgc gccagaagca ggtcaccgtg 3361 ggaatgccgc cgaacaatga gcacaccatc acggcgccgc tgccggaagt cgagctgcga 3421 cagctcatcc atgatgccta tggcgacgat gagagcactg cgatgctcac ccaggagctg 3481 atggtctacc tggccatgtt cattcgcacc gagccgcagc tgttccacga gatgctgcgc 3541 ctgcgcgtcg gcctgatcat ccaggtgatg gccaaggagc tgtcccgcac cctcaactgc 3601 gacggcgagg cggcgtcgga gcatttactt aacctctcgc ccttcgagat gaagaatctc 3661 ctctaccaca tactcagcgg caaggagttt gcagtcagca gtgtggcccg tggcaatctg 3721 tccattgtta gctgcaagag cagccgcgtc agcaagaaga gccaaatcgg tctgggcgat 3781 ccggagggcg aggacgcttt aatagccacc attgacgacc ggcagggaca gtggctgcgt 3841 cgcaggcgac tggatggcgc cctgaatcgt gtgccccgtg acttttattc gcgcgtttgg 3901 accgttttgg agaagtgcca gggtctggcc atcgagggac gcgtcctgca gcagagtctc 3961 acccaggaga tgacgccggg cgaactgaag ttcgccctcg aagtggagac ggccctcaat 4021 cagataccgc agcccgagta caggcagctg gtggtggagg ccctgatggt gctcaccctc 4081 gtcaccgagc acaacatggt gcccactctc gggggcatca tctacgtgga gcatctggtg 4141 cacaaggcca accagctgtt cctcgaggac cagcgcaagg tgcagggcga tgccacgctg 4201 tgctgcgcca agatcaagga cggcaaggag cagcagcagg ccgcctcggg gatgctgctg 4261 tgcggcggcg ccgcctacat atgccagcac ctctacgaca gtgctcccag cggcagctac 4321 ggaaccatga cctacatgtc ccgggcggtg gccctggtgc tcgactgtgt gcccaagcac 4381 ggcgagatgg agtgcgccat ctcctgaagc ggcgggcctc cacttaatgt aatgccaaaa 4441 tctctagctc tgcaactctg gatacgtccg ttctcgttct cgcttagccc cgtctcgctt 4501 tctctcgatc ctgtcctgca tttttttgtt tttcccagcc tctgacccaa aatgtatata 4561 ttctttgacc cgaaaacctg tttgttctga ccgaaaacga aggcagaatt aagaagccaa 4621 tcgaatggta ttagcccact tatgtgtgtg tgttgaccct ttggaaggat actccaaaag 4681 cccccccccc aaaaacagat ccctatccca atcctaaacc atttggaaag ccaacagtac 4741 agatttgttt tttgtacttg cggacgacac ttttgattgt tttaactttt atatttttaa 4801 ctgaccctat tttatattat acgtttgaat tgtaaagttg aacgcgcagc aagatttaca 4861 ataaaaatgt gtttgcaatg tt