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LOCUS XM_017155704 4886 bp mRNA linear INV 09-DEC-2024 regulatory subunit alpha (LOC108066922), transcript variant X3, mRNA. ACCESSION XM_017155704 VERSION XM_017155704.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017155704.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4886 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..4886 /gene="LOC108066922" /note="probable phosphorylase b kinase regulatory subunit alpha; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:108066922" CDS 350..4411 /gene="LOC108066922" /codon_start=1 /product="probable phosphorylase b kinase regulatory subunit alpha isoform X3" /protein_id="XP_017011193.2" /db_xref="GeneID:108066922" /translation="MRSRSNSGVRLDYYQRIVHRLILAHQEPVTGLFPASNVNSHAWI RDNVYCILAVWGLSMAYKKIADQDEDRAKCYELEQSCVKLMRGLLMAMMNQKDKVEKF KMTQSPYDSLHAKYSSKNGLPVVGDNEWGHLQIDAVSLYLLILAQMTASGLQIVFSLD EVSFIQNLVFYIESAYSIPDYGIWERGDKTNHGEPELNASSIGMAKAALEAMNELDLF GARGGPASVIHVLADEAHKCQAVLQSMLPRESNSKELDSGLLCVIGFPAFAVDDAQLI HNTKDAILSRLQGKYGCKRFLRDGYRTPKEDPSRLYYERWELRMFENIECEWPLFYCY LILFHAFQSDKRAVEEYAGRLEKIMVRSEDGILLVPESYAVPQDLVGFEYQKPGSQAR EVVGRCPFLWGQSLFILGRLLQEGFLAVGELDPLNRRLGAQKKPDVVVQVVIIAEDNE IRDKLAEHDLHVQTIAEVAPIEVQPARVLSHLYTYLGRNRKLGLSGRKSRDVGILSTS KLYSLKDRIFAFTPQHIDYEEYYTTRDPDLLASNFTTNLAFLTNNWRHMLGRPTITLM ATHYMLDQDKIPLAMIQTMRKLKSGYINGTRVMLGSLKDFLNTSAITDLSFLGSTEDG YPDRLHPDVQTYLDEHLLRSFSNRSTMNLRGGQLRPRTLRRRMSCKGAIKKTRSINVD SDNLGMEGPSPLTERRLSSIVPPPWLQANKQSHVSVFATTPEEGPASSPLQLGNELSV RENIYPVDPHHSRSAIDRRSEFVRQQEMPKILIQRHRAETNFADTEVEELIAMLRETE NLEEQGDILQYLVDTQGLDFNTAGLGFKNKSDDNATPNANGAAAELEQAFVDEVVLEL AGGGAGGAAGGGGGAGEGSKKSPTLVLPTVIIDAATISASAAATSTDPDHNNPASNCN SNSSNNTSSSNTNNHMSPHENNNNDSSQSEGMLEEGRVVTVRDLLKGLYEKACQQKLW GLVRHTAGMLGKRVEDLAKAVTDLLVRQKQVTVGMPPNNEHTITAPLPEVELRQLIHD AYGDDESTAMLTQELMVYLAMFIRTEPQLFHEMLRLRVGLIIQVMAKELSRTLNCDGE AASEHLLNLSPFEMKNLLYHILSGKEFAVSSVARGNLSIVSCKSSRVSKKSQIGLGDP EGEDALIATIDDRQGQWLRRRRLDGALNRVPRDFYSRVWTVLEKCQGLAIEGRVLQQS LTQEMTPGELKFALEVETALNQIPQPEYRQLVVEALMVLTLVTEHNMVPTLGGIIYVE HLVHKANQLFLEDQRKVQGDATLCCAKIKDGKEQQQAASGMLLCGGAAYICQHLYDSA PSGSYGTMTYMSRAVALVLDCVPKHGEMECAIS" misc_feature 371..>1666 /gene="LOC108066922" /note="Glycosyl hydrolases family 15; Region: Glyco_hydro_15; pfam00723" /db_xref="CDD:395586" misc_feature <3209..3559 /gene="LOC108066922" /note="Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain; Region: Bac_rhamnosid6H; cl46875" /db_xref="CDD:481215" misc_feature 3590..>4114 /gene="LOC108066922" /note="Phosphorylase b kinase C-terminal domain; Region: KPBB_C; pfam19292" /db_xref="CDD:437124" polyA_site 4886 /gene="LOC108066922" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gcaacgctgc cggcagaaat atcgataaat tgaattgaca ttgagttgac tttaggtgca 61 ttttaacgac aatatatctc gatttattcg caaacaagtg accagccagg cttcgaaacg 121 cgaacggcag ccaagcgcca ctccctcctc cgaatcccgg agagaatgcg ctgtcctcgc 181 ggcgaactga acgcattcta cgggttctag cggcgcgagg tgttccgggg agctctgggc 241 ttcctcctcc tccactccgc cgaacggaac cacaacaaaa cgatccgaag cgatcccaac 301 cgatccgatc caatccgatc cgacattata aaccacctcg aaaacggcca tgcgttcccg 361 cagcaattcg ggcgtccggt tggactacta ccagcgcatc gtgcaccgtc tgatcttggc 421 ccaccaggag ccggtcaccg gtctgttccc cgcctccaat gtcaactcac acgcctggat 481 cagggacaat gtgtactgca tcctggccgt ctggggcctg tccatggcct acaagaagat 541 cgccgaccag gacgaggacc gggccaagtg ctatgagctc gagcagagct gcgtgaagct 601 gatgcgcggc ctgctcatgg ccatgatgaa ccagaaggac aaggtggaga agttcaagat 661 gacccagagt ccctacgact ccctccacgc caagtactcg agcaagaacg gcctgcccgt 721 cgtcggcgac aatgagtggg gccatctgca gatcgatgcc gtctccctgt acctgctgat 781 cctggcccag atgacggcct ccggtctgca gatcgtcttc tccctggacg aggtgtcgtt 841 catccagaat ctggtcttct acattgagtc cgcctactcc attccggact acggaatatg 901 ggaacgcggc gacaagacca atcatggcga gcccgagttg aatgccagct ccattggcat 961 ggccaaggcg gcgctggagg cgatgaacga gctggatctg ttcggggcgc gcggcgggcc 1021 ggccagtgtg atccatgtgc tggccgacga ggcccacaaa tgccaggcgg tgctccagtc 1081 gatgctgccg cgtgagtcca acagcaagga gctggactcg ggactgctct gtgtcattgg 1141 atttccggcc tttgccgtcg acgatgccca gctgatacac aacaccaagg atgcgatatt 1201 gtcgcgactg cagggcaagt acggctgcaa gcggttcctg cgcgacggct accgcactcc 1261 caaggaggat ccatcgcggc tctactacga acgctgggag ctgcgcatgt tcgagaacat 1321 cgagtgcgag tggccgctct tctactgcta cctgattctc ttccacgcct tccagagcga 1381 caagcgggcg gtggaggagt acgccggccg gctggagaag atcatggtgc gctcggagga 1441 tggcatactg ctcgtgccgg agagctatgc ggtgccgcag gatctggtgg gcttcgagta 1501 ccagaagccg ggatcgcagg cccgcgaagt ggtcggtcgc tgcccgttcc tgtggggcca 1561 gtccctgttt atcctcggcc gcttgctgca ggagggcttc ttggccgtgg gcgagctgga 1621 tccgctgaat cgtcgcctgg gcgcgcaaaa gaaacccgat gtggtcgtcc aggtggtcat 1681 cattgccgag gacaacgaga tccgcgacaa gctggccgag cacgatctgc atgtgcagac 1741 aatcgccgag gtggctccca ttgaggtgca gccagcccgt gttttgagtc acctgtacac 1801 ctacctcggg cgcaaccgca agctgggttt gagcggcagg aagtcccgcg atgtgggcat 1861 tctcagcacc agcaagttgt actcgctgaa ggatcgcata ttcgctttca ccccgcagca 1921 tatcgactat gaagaatatt atacaacacg cgatcccgat ttgcttgcca gcaattttac 1981 cacaaattta gcattcttga ccaacaattg gcgtcacatg ttgggcaggc cgacaatcac 2041 actaatggca acccactata tgctagatca ggacaagatt ccgctggcca tgatccagac 2101 gatgcggaaa ctcaagtcgg gctacatcaa cgggacgcgc gtgatgctgg gcagcctgaa 2161 ggacttcctc aacacctcgg ccatcacgga cctgagcttc ctgggcagca cggaggatgg 2221 ctatccggat cgcctgcatc cggacgtgca gacgtacctc gacgagcacc tgctgcgctc 2281 gttcagcaac cgcagcacaa tgaatctgcg cggcggacag ctgcgtccgc ggaccctcag 2341 gcgccgcatg tcctgcaagg gagcgatcaa gaagacgcgc tcgatcaacg tggattccga 2401 caacctcggc atggagggac cctcgccgct caccgaacgc cgcctctcct cgattgtgcc 2461 gcctccctgg ctgcaggcca acaagcagag ccacgtcagc gtcttcgcca ccacgcccga 2521 ggagggaccg gccagctcgc ccctgcaact gggcaacgag ctgtccgtcc gcgagaacat 2581 ctatccggtg gatccgcacc acagccgctc ggcgatcgac agacgcagcg agtttgtgcg 2641 ccagcaagag atgcccaaaa ttctcataca acgccatcgt gccgaaacca atttcgcgga 2701 cacagaggtc gaggagctga ttgcgatgct gcgcgaaacg gagaatctcg aggagcaggg 2761 cgacatcctg cagtacctgg tggacaccca gggcctggac ttcaacacag ctggcctggg 2821 attcaagaac aaatcggacg acaatgcgac cccaaatgcc aatggtgcag ccgccgagct 2881 cgagcaggcg tttgtggatg aggtggtgct ggaactggct ggtggtggtg caggtggtgc 2941 agcaggagga ggcggcggag caggtgaagg gtccaagaag agtccaacgc ttgtgctgcc 3001 cacggtgatc atcgatgctg ctacaatttc agcctcagcc gccgccacta gcaccgatcc 3061 ggatcataat aatccagcca gcaattgcaa cagcaacagc agcaacaaca ccagcagcag 3121 caacaccaac aaccacatga gcccacatga gaataacaac aacgattctt cccaatccga 3181 aggaatgctg gaggagggac gcgtggtgac cgtgcgggat ctgttgaagg gactctacga 3241 gaaggcctgc cagcagaagc tctggggact cgtccgccac acggccggga tgctgggcaa 3301 gcgggtggag gatctggcca aggcggtcac cgatctgctg gtgcgccaga agcaggtcac 3361 cgtgggaatg ccgccgaaca atgagcacac catcacggcg ccgctgccgg aagtcgagct 3421 gcgacagctc atccatgatg cctatggcga cgatgagagc actgcgatgc tcacccagga 3481 gctgatggtc tacctggcca tgttcattcg caccgagccg cagctgttcc acgagatgct 3541 gcgcctgcgc gtcggcctga tcatccaggt gatggccaag gagctgtccc gcaccctcaa 3601 ctgcgacggc gaggcggcgt cggagcattt acttaacctc tcgcccttcg agatgaagaa 3661 tctcctctac cacatactca gcggcaagga gtttgcagtc agcagtgtgg cccgtggcaa 3721 tctgtccatt gttagctgca agagcagccg cgtcagcaag aagagccaaa tcggtctggg 3781 cgatccggag ggcgaggacg ctttaatagc caccattgac gaccggcagg gacagtggct 3841 gcgtcgcagg cgactggatg gcgccctgaa tcgtgtgccc cgtgactttt attcgcgcgt 3901 ttggaccgtt ttggagaagt gccagggtct ggccatcgag ggacgcgtcc tgcagcagag 3961 tctcacccag gagatgacgc cgggcgaact gaagttcgcc ctcgaagtgg agacggccct 4021 caatcagata ccgcagcccg agtacaggca gctggtggtg gaggccctga tggtgctcac 4081 cctcgtcacc gagcacaaca tggtgcccac tctcgggggc atcatctacg tggagcatct 4141 ggtgcacaag gccaaccagc tgttcctcga ggaccagcgc aaggtgcagg gcgatgccac 4201 gctgtgctgc gccaagatca aggacggcaa ggagcagcag caggccgcct cggggatgct 4261 gctgtgcggc ggcgccgcct acatatgcca gcacctctac gacagtgctc ccagcggcag 4321 ctacggaacc atgacctaca tgtcccgggc ggtggccctg gtgctcgact gtgtgcccaa 4381 gcacggcgag atggagtgcg ccatctcctg aagcggcggg cctccactta atgtaatgcc 4441 aaaatctcta gctctgcaac tctggatacg tccgttctcg ttctcgctta gccccgtctc 4501 gctttctctc gatcctgtcc tgcatttttt tgtttttccc agcctctgac ccaaaatgta 4561 tatattcttt gacccgaaaa cctgtttgtt ctgaccgaaa acgaaggcag aattaagaag 4621 ccaatcgaat ggtattagcc cacttatgtg tgtgtgttga ccctttggaa ggatactcca 4681 aaagcccccc ccccaaaaac agatccctat cccaatccta aaccatttgg aaagccaaca 4741 gtacagattt gttttttgta cttgcggacg acacttttga ttgttttaac ttttatattt 4801 ttaactgacc ctattttata ttatacgttt gaattgtaaa gttgaacgcg cagcaagatt 4861 tacaataaaa atgtgtttgc aatgtt