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LOCUS XM_017155703 4888 bp mRNA linear INV 09-DEC-2024 regulatory subunit alpha (LOC108066922), transcript variant X2, mRNA. ACCESSION XM_017155703 VERSION XM_017155703.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017155703.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4888 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..4888 /gene="LOC108066922" /note="probable phosphorylase b kinase regulatory subunit alpha; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108066922" CDS 349..4413 /gene="LOC108066922" /codon_start=1 /product="probable phosphorylase b kinase regulatory subunit alpha isoform X2" /protein_id="XP_017011192.2" /db_xref="GeneID:108066922" /translation="MRSRSNSGVRLDYYQRIVHRLILAHQEPVTGLFPASNVNSHAWI RDNVYCILAVWGLSMAYKKIADQDEDRAKCYELEQSCVKLMRGLLMAMMNQKDKVEKF KMTQSPYDSLHAKYSSKNGLPVVGDNEWGHLQIDAVSLYLLILAQMTASGLQIVFSLD EVSFIQNLVFYIESAYSIPDYGIWERGDKTNHGEPELNASSIGMAKAALEAMNELDLF GARGGPASVIHVLADEAHKCQAVLQSMLPRESNSKELDSGLLCVIGFPAFAVDDAQLI HNTKDAILSRLQGKYGCKRFLRDGYRTPKEDPSRLYYERWELRMFENIECEWPLFYCY LILFHAFQSDKRAVEEYAGRLEKIMVRSEDGILLVPESYAVPQDLVGFEYQKPGSQAR EVVGRCPFLWGQSLFILGRLLQEGFLAVGELDPLNRRLGAQKKPDVVVQVVIIAEDNE IRDKLAEHDLHVQTIAEVAPIEVQPARVLSHLYTYLGRNRKLGLSGRKSRDVGILSTS KLYSLKDRIFAFTPQFADLSRFYIASDNELMIDILKGEINFLKSAWDLLGRPLVTLVL KRIHLDQDKIPLAMIQTMRKLKSGYINGTRVMLGSLKDFLNTSAITDLSFLGSTEDGY PDRLHPDVQTYLDEHLLRSFSNRSTMNLRGGQLRPRTLRRRMSCKGAIKKTRSINVDS DNLGMEGPSPLTERRLSSIVPPPWLQANKQSHVSVFATTPEEGPASSPLQLGNELSVR ENIYPVDPHHSRSAIDRRSEFVRQQEITVPKILIQRHRAETNFADTEVEELIAMLRET ENLEEQGDILQYLVDTQGLDFNTAGLGFKNKSDDNATPNANGAAAELEQAFVDEVVLE LAGGGAGGAAGGGGGAGEGSKKSPTLVLPTVIIDAATISASAAATSTDPDHNNPASNC NSNSSNNTSSSNTNNHMSPHENNNNDSSQSEGMLEEGRVVTVRDLLKGLYEKACQQKL WGLVRHTAGMLGKRVEDLAKAVTDLLVRQKQVTVGMPPNNEHTITAPLPEVELRQLIH DAYGDDESTAMLTQELMVYLAMFIRTEPQLFHEMLRLRVGLIIQVMAKELSRTLNCDG EAASEHLLNLSPFEMKNLLYHILSGKEFAVSSVARGNLSIVSCKSSRVSKKSQIGLGD PEGEDALIATIDDRQGQWLRRRRLDGALNRVPRDFYSRVWTVLEKCQGLAIEGRVLQQ SLTQEMTPGELKFALEVETALNQIPQPEYRQLVVEALMVLTLVTEHNMVPTLGGIIYV EHLVHKANQLFLEDQRKVQGDATLCCAKIKDGKEQQQAASGMLLCGGAAYICQHLYDS APSGSYGTMTYMSRAVALVLDCVPKHGEMECAIS" misc_feature 370..>1665 /gene="LOC108066922" /note="Glycosyl hydrolases family 15; Region: Glyco_hydro_15; pfam00723" /db_xref="CDD:395586" misc_feature <3211..3561 /gene="LOC108066922" /note="Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain; Region: Bac_rhamnosid6H; cl46875" /db_xref="CDD:481215" misc_feature 3592..>4116 /gene="LOC108066922" /note="Phosphorylase b kinase C-terminal domain; Region: KPBB_C; pfam19292" /db_xref="CDD:437124" polyA_site 4888 /gene="LOC108066922" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 caacgctgcc ggcagaaata tcgataaatt gaattgacat tgagttgact ttaggtgcat 61 tttaacgaca atatatctcg atttattcgc aaacaagtga ccagccaggc ttcgaaacgc 121 gaacggcagc caagcgccac tccctcctcc gaatcccgga gagaatgcgc tgtcctcgcg 181 gcgaactgaa cgcattctac gggttctagc ggcgcgaggt gttccgggga gctctgggct 241 tcctcctcct ccactccgcc gaacggaacc acaacaaaac gatccgaagc gatcccaacc 301 gatccgatcc aatccgatcc gacattataa accacctcga aaacggccat gcgttcccgc 361 agcaattcgg gcgtccggtt ggactactac cagcgcatcg tgcaccgtct gatcttggcc 421 caccaggagc cggtcaccgg tctgttcccc gcctccaatg tcaactcaca cgcctggatc 481 agggacaatg tgtactgcat cctggccgtc tggggcctgt ccatggccta caagaagatc 541 gccgaccagg acgaggaccg ggccaagtgc tatgagctcg agcagagctg cgtgaagctg 601 atgcgcggcc tgctcatggc catgatgaac cagaaggaca aggtggagaa gttcaagatg 661 acccagagtc cctacgactc cctccacgcc aagtactcga gcaagaacgg cctgcccgtc 721 gtcggcgaca atgagtgggg ccatctgcag atcgatgccg tctccctgta cctgctgatc 781 ctggcccaga tgacggcctc cggtctgcag atcgtcttct ccctggacga ggtgtcgttc 841 atccagaatc tggtcttcta cattgagtcc gcctactcca ttccggacta cggaatatgg 901 gaacgcggcg acaagaccaa tcatggcgag cccgagttga atgccagctc cattggcatg 961 gccaaggcgg cgctggaggc gatgaacgag ctggatctgt tcggggcgcg cggcgggccg 1021 gccagtgtga tccatgtgct ggccgacgag gcccacaaat gccaggcggt gctccagtcg 1081 atgctgccgc gtgagtccaa cagcaaggag ctggactcgg gactgctctg tgtcattgga 1141 tttccggcct ttgccgtcga cgatgcccag ctgatacaca acaccaagga tgcgatattg 1201 tcgcgactgc agggcaagta cggctgcaag cggttcctgc gcgacggcta ccgcactccc 1261 aaggaggatc catcgcggct ctactacgaa cgctgggagc tgcgcatgtt cgagaacatc 1321 gagtgcgagt ggccgctctt ctactgctac ctgattctct tccacgcctt ccagagcgac 1381 aagcgggcgg tggaggagta cgccggccgg ctggagaaga tcatggtgcg ctcggaggat 1441 ggcatactgc tcgtgccgga gagctatgcg gtgccgcagg atctggtggg cttcgagtac 1501 cagaagccgg gatcgcaggc ccgcgaagtg gtcggtcgct gcccgttcct gtggggccag 1561 tccctgttta tcctcggccg cttgctgcag gagggcttct tggccgtggg cgagctggat 1621 ccgctgaatc gtcgcctggg cgcgcaaaag aaacccgatg tggtcgtcca ggtggtcatc 1681 attgccgagg acaacgagat ccgcgacaag ctggccgagc acgatctgca tgtgcagaca 1741 atcgccgagg tggctcccat tgaggtgcag ccagcccgtg ttttgagtca cctgtacacc 1801 tacctcgggc gcaaccgcaa gctgggtttg agcggcagga agtcccgcga tgtgggcatt 1861 ctcagcacca gcaagttgta ctcgctgaag gatcgcatat tcgctttcac cccgcagttc 1921 gccgacctgt cgcgcttcta tatcgcctcc gataacgaac tcatgatcga catcctcaag 1981 ggcgagataa atttcctcaa gtccgcttgg gatctgctgg gtcgtccgct ggtcaccctg 2041 gtgctgaagc gcatccacct agatcaggac aagattccgc tggccatgat ccagacgatg 2101 cggaaactca agtcgggcta catcaacggg acgcgcgtga tgctgggcag cctgaaggac 2161 ttcctcaaca cctcggccat cacggacctg agcttcctgg gcagcacgga ggatggctat 2221 ccggatcgcc tgcatccgga cgtgcagacg tacctcgacg agcacctgct gcgctcgttc 2281 agcaaccgca gcacaatgaa tctgcgcggc ggacagctgc gtccgcggac cctcaggcgc 2341 cgcatgtcct gcaagggagc gatcaagaag acgcgctcga tcaacgtgga ttccgacaac 2401 ctcggcatgg agggaccctc gccgctcacc gaacgccgcc tctcctcgat tgtgccgcct 2461 ccctggctgc aggccaacaa gcagagccac gtcagcgtct tcgccaccac gcccgaggag 2521 ggaccggcca gctcgcccct gcaactgggc aacgagctgt ccgtccgcga gaacatctat 2581 ccggtggatc cgcaccacag ccgctcggcg atcgacagac gcagcgagtt tgtgcgccag 2641 caagagataa cagtgcccaa aattctcata caacgccatc gtgccgaaac caatttcgcg 2701 gacacagagg tcgaggagct gattgcgatg ctgcgcgaaa cggagaatct cgaggagcag 2761 ggcgacatcc tgcagtacct ggtggacacc cagggcctgg acttcaacac agctggcctg 2821 ggattcaaga acaaatcgga cgacaatgcg accccaaatg ccaatggtgc agccgccgag 2881 ctcgagcagg cgtttgtgga tgaggtggtg ctggaactgg ctggtggtgg tgcaggtggt 2941 gcagcaggag gaggcggcgg agcaggtgaa gggtccaaga agagtccaac gcttgtgctg 3001 cccacggtga tcatcgatgc tgctacaatt tcagcctcag ccgccgccac tagcaccgat 3061 ccggatcata ataatccagc cagcaattgc aacagcaaca gcagcaacaa caccagcagc 3121 agcaacacca acaaccacat gagcccacat gagaataaca acaacgattc ttcccaatcc 3181 gaaggaatgc tggaggaggg acgcgtggtg accgtgcggg atctgttgaa gggactctac 3241 gagaaggcct gccagcagaa gctctgggga ctcgtccgcc acacggccgg gatgctgggc 3301 aagcgggtgg aggatctggc caaggcggtc accgatctgc tggtgcgcca gaagcaggtc 3361 accgtgggaa tgccgccgaa caatgagcac accatcacgg cgccgctgcc ggaagtcgag 3421 ctgcgacagc tcatccatga tgcctatggc gacgatgaga gcactgcgat gctcacccag 3481 gagctgatgg tctacctggc catgttcatt cgcaccgagc cgcagctgtt ccacgagatg 3541 ctgcgcctgc gcgtcggcct gatcatccag gtgatggcca aggagctgtc ccgcaccctc 3601 aactgcgacg gcgaggcggc gtcggagcat ttacttaacc tctcgccctt cgagatgaag 3661 aatctcctct accacatact cagcggcaag gagtttgcag tcagcagtgt ggcccgtggc 3721 aatctgtcca ttgttagctg caagagcagc cgcgtcagca agaagagcca aatcggtctg 3781 ggcgatccgg agggcgagga cgctttaata gccaccattg acgaccggca gggacagtgg 3841 ctgcgtcgca ggcgactgga tggcgccctg aatcgtgtgc cccgtgactt ttattcgcgc 3901 gtttggaccg ttttggagaa gtgccagggt ctggccatcg agggacgcgt cctgcagcag 3961 agtctcaccc aggagatgac gccgggcgaa ctgaagttcg ccctcgaagt ggagacggcc 4021 ctcaatcaga taccgcagcc cgagtacagg cagctggtgg tggaggccct gatggtgctc 4081 accctcgtca ccgagcacaa catggtgccc actctcgggg gcatcatcta cgtggagcat 4141 ctggtgcaca aggccaacca gctgttcctc gaggaccagc gcaaggtgca gggcgatgcc 4201 acgctgtgct gcgccaagat caaggacggc aaggagcagc agcaggccgc ctcggggatg 4261 ctgctgtgcg gcggcgccgc ctacatatgc cagcacctct acgacagtgc tcccagcggc 4321 agctacggaa ccatgaccta catgtcccgg gcggtggccc tggtgctcga ctgtgtgccc 4381 aagcacggcg agatggagtg cgccatctcc tgaagcggcg ggcctccact taatgtaatg 4441 ccaaaatctc tagctctgca actctggata cgtccgttct cgttctcgct tagccccgtc 4501 tcgctttctc tcgatcctgt cctgcatttt tttgtttttc ccagcctctg acccaaaatg 4561 tatatattct ttgacccgaa aacctgtttg ttctgaccga aaacgaaggc agaattaaga 4621 agccaatcga atggtattag cccacttatg tgtgtgtgtt gaccctttgg aaggatactc 4681 caaaagcccc ccccccaaaa acagatccct atcccaatcc taaaccattt ggaaagccaa 4741 cagtacagat ttgttttttg tacttgcgga cgacactttt gattgtttta acttttatat 4801 ttttaactga ccctatttta tattatacgt ttgaattgta aagttgaacg cgcagcaaga 4861 tttacaataa aaatgtgttt gcaatgtt