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PREDICTED: Drosophila takahashii wings up A (wupA), transcript


LOCUS       XM_017155695            1267 bp    mRNA    linear   INV 09-DEC-2024
            variant X7, mRNA.
ACCESSION   XM_017155695
VERSION     XM_017155695.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017155695.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1267
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..1267
                     /gene="wupA"
                     /note="wings up A; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 2 Proteins"
                     /db_xref="GeneID:108066919"
     CDS             175..774
                     /gene="wupA"
                     /codon_start=1
                     /product="troponin I isoform X7"
                     /protein_id="XP_017011184.1"
                     /db_xref="GeneID:108066919"
                     /translation="MADDEAKKAKQAEIERKRAEVRKRMEEASKAKKAKKGFMTPERK
                     KKLRLLLRKKAAEELKKEQERKAAERRRIIEERCGSPRNLSDASEAELQTICKQYWQR
                     VYDLEGDKFDLEHVQKVKAQEINDLNAQVNDLRGKFVKPALKKVSKYENKFAKLQKKA
                     AEFNFRNQLKVVKKKEFTLEEEEKEKKIKDAAVLKQAKK"
     misc_feature    337..690
                     /gene="wupA"
                     /note="Region: Troponin; pfam00992"
                     /db_xref="CDD:460018"
     polyA_site      1267
                     /gene="wupA"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ccgtatctgt atccgttgga aggctggccg ctagaatata gtctgccgtg gatcgtcgga
       61 ccgttcagtc tttttgtgtc gttcagtatc atccgattcg tgtgatcgac agcacagccg
      121 aatttttttt cttttttttc taattccttg aagtaaccaa aaacacaaat caaaatggct
      181 gatgatgagg ctaagaaggc taaacaggct gagatcgagc gcaagcgtgc tgaggtgcgc
      241 aagcgcatgg aggaagcctc caaggccaag aaggccaaga agggtttcat gaccccagag
      301 aggaagaaga aactcaggtt gctgctgcgt aagaaagccg ctgaggagct gaagaaagaa
      361 caggaacgca aagcggctga acgtagacgc atcattgaag aacgttgcgg cagtcccagg
      421 aatctcagcg atgccagcga agccgaactg caaacaatat gcaaacaata ttggcaacgc
      481 gtttacgatt tggagggcga taagtttgat ttagaacacg tgcagaaagt caaggcccaa
      541 gagatcaacg atctcaatgc ccaagttaac gatcttcgcg gcaagttcgt caagccagcc
      601 ctgaagaagg tctccaaata cgaaaacaaa ttcgccaagc tgcagaagaa ggccgctgag
      661 ttcaacttcc gcaaccagct caaggtggtg aagaagaagg agttcacgct ggaggaggag
      721 gagaaggaga aaaagataaa agatgccgct gtgctaaagc aagccaaaaa gtaagaaacc
      781 cgactggtcc aagggcaagc ccggagatgc caaggtgaag gaggaggttg aggccgaagc
      841 ttaagtgtcc acacgtccac tagtgtccac tgacccgtga ctcccgccct aaacaataat
      901 tgaaattatt tacaacaatt atctgaagca atacaattta tataaatcta ttaatatata
      961 tatatatcca caaatatata tgcatgtata tatctcgcca tatatatgtg ttcacaatgg
     1021 atttgatcag aaatgaagtc aataaacaac aacagcaaca actaaaacaa ctcaaaatca
     1081 aaatcaaact cagactcaaa ctcaaactca agaacaaaaa caactgctac aaataattca
     1141 gatcaacgat tcaaaacaac agccaaacat ctgaacacct tgatgaatta ttgattatat
     1201 ttcattattt acaaattata ttttttaatg taaattaaat taaattacaa aaaaaaaaga
     1261 aacaaca