Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_017155685 1416 bp mRNA linear INV 09-DEC-2024 factor ZNF622 (LOC108066917), mRNA. ACCESSION XM_017155685 VERSION XM_017155685.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017155685.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1416 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..1416 /gene="LOC108066917" /note="cytoplasmic 60S subunit biogenesis factor ZNF622; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108066917" CDS 104..1333 /gene="LOC108066917" /codon_start=1 /product="cytoplasmic 60S subunit biogenesis factor ZNF622" /protein_id="XP_017011174.1" /db_xref="GeneID:108066917" /translation="MSHFTCLNCDARFASADVQRDHYKTDWHRYNLKRRVAQLPPVTA EEFQQRVLSARSATDAALEEQQLSVYCQACRRQFGGQKAHDNHLNSRKHKELLARFER DQMMASGGSASTASASVCTRSVLEPRPHPALAAAAAGKGRLAFAERAAKADEDQEMDE DDDDFEDIEEEEVDSDEWDKIPENPLTERDCLFCSHESEDLVENLKHMSVAHSFFIPD TEYCTDIEGLLYYLGEKVANYFICLFCNDRGKTFYSLDAVRKHMVDKGHCQMLHEGVA LAEYAEYYDYSSSYPDNKEGMDIDDEVVPELLDGDEYQLVLPSGAVIGHRSLLRYYRQ HLRPERAVVLQKSDRKLHRVLSEYRALGWTHTQQLSAARKARDIHLMKRVQSKWQMKL GCKANKLQKHYRAQVLI" misc_feature <119..244 /gene="LOC108066917" /note="hypothetical protein; Provisional; Region: PTZ00448" /db_xref="CDD:185627" misc_feature 119..187 /gene="LOC108066917" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275371" misc_feature order(140..148,152..157,167..169,182..184,329..331, 338..352,356..361) /gene="LOC108066917" /note="putative nucleic acid binding site [nucleotide binding]; other site" /db_xref="CDD:275371" misc_feature 311..385 /gene="LOC108066917" /note="Zinc-finger double-stranded RNA-binding; Region: zf-C2H2_jaz; pfam12171" /db_xref="CDD:432381" misc_feature 314..382 /gene="LOC108066917" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275371" misc_feature 674..973 /gene="LOC108066917" /note="C2H2 type zinc-finger (2 copies); Region: zf-C2H2_2; pfam12756" /db_xref="CDD:463690" polyA_site 1416 /gene="LOC108066917" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ccgagaacgt ggttctgtta atcatcttta cttgtgaaat acgccattcc aattcgattc 61 gaaaccgata aaaacaaaac tctaaaccaa atcaacagca ggaatgtcgc actttacctg 121 cctgaactgc gatgcccgct tcgccagcgc ggatgtgcag cgggatcact acaagaccga 181 ctggcatcgc tacaacctga agcgcagggt ggcccagctg cccccggtca cggcggagga 241 gttccagcag cgcgtgctga gcgcccgcag tgccacggat gcggcgctgg aggagcagca 301 gctgagcgtc tactgccagg cctgcaggag gcagtttggt ggccagaagg cccacgacaa 361 tcacctgaac agccgcaagc acaaggagct cctcgcccgc ttcgagcggg atcagatgat 421 ggccagcggt ggcagcgcca gtaccgcctc cgcttccgtt tgcacgcgca gcgtcctcga 481 gccacgcccc catcccgccc tggccgccgc cgccgctggc aagggtcgtc tggcctttgc 541 ggagcgagcc gccaaggcgg atgaggacca ggagatggac gaagacgacg acgacttcga 601 ggacatcgag gaggaggagg tggactccga tgagtgggac aagatacccg agaatccgct 661 gacggagcgc gactgcctgt tctgctcaca cgagagcgag gatctggtgg agaacctgaa 721 gcacatgtcc gtggcccact cgttcttcat cccagacaca gaatactgca ccgacatcga 781 gggactgctc tactacctgg gcgagaaggt ggccaactac ttcatctgcc tgttctgcaa 841 cgatcgcggc aagaccttct actccctgga cgcggtgcgc aagcacatgg tcgacaaggg 901 ccactgccag atgctccacg agggcgtggc gctggccgag tatgccgagt actacgacta 961 cagcagcagt tacccagata ataaagaagg catggacatt gatgacgagg tggtgcccga 1021 gctgctagac ggcgatgagt accagttggt gctgccatcc ggggcagtca ttggccatcg 1081 gtccctgctc cgctactacc gccagcatct ccggccggaa cgcgctgtgg tcctccagaa 1141 gtccgaccgc aaactgcatc gcgtgctcag cgaatatcgt gctctcggct ggacgcacac 1201 ccaacagctc tctgccgctc gcaaggcacg cgacattcat ctgatgaagc gcgtccagtc 1261 caagtggcag atgaagctcg gctgcaaggc caacaagctg cagaagcact atcgcgccca 1321 ggttctgata taaatcgttg ttttctctcc atttcctttt taaaaagcta tatctaaatc 1381 cattgtacaa taaaaacgaa ttgaattttg cttaaa