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LOCUS XM_017155671 4707 bp mRNA linear INV 09-DEC-2024 variant X27, mRNA. ACCESSION XM_017155671 VERSION XM_017155671.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017155671.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4707 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..4707 /gene="dlg1" /note="discs large 1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108066907" CDS 47..2431 /gene="dlg1" /codon_start=1 /product="disks large 1 tumor suppressor protein isoform X24" /protein_id="XP_017011160.2" /db_xref="GeneID:108066907" /translation="MDSDTDDSEREKSSDPNEGLLSSDDKTFHDDDEEEDSSPADDEE EPEGEESLLPQQQKKAQPLVVLVESGSGEAIEEPTEEIEIDRVTLPIKEEREPDPEPE PSPLKHDSVRESVECFYSAQDLLEYGHMLSSSGGSIVRTPDVESGYFEKSESDEGGPP SSSSSLGAARCRLLSGISGLSPVSSSSSRHSAEGLRMELSRFRTMIETLERESLEKTK GKPKPRQRSQLQVESAGESGSDQGSEREMERGFWSTVFGQAGLEISQDEDERIADIKK AHRALELLEDYHARLSEPQDRALRIAIERVIRIFKSRLFQALLDIQEFYELTLLDDSK SIQQKTAETLQIATKWEKDGQAVKIADFIKTSNLNRNCAYEFNNDASSNQTNQSANQL NQNQIANNVSAQAQAEALSRTFKSELEEILNQRMRIESDTENAKEPPAEQQQQRSSRS PQQNPQQQQPQQQQQPQQQLGSKSRSGSQTVNGDDSWLYEDIQLERGNSGLGFSIAGG TDNPHIGTDTSIYITKLISGGAAAADGRLSINDIIVSVNEVSVVDVPHASAVDALKKA GNVVKLHVKRKRDTAATTPAAGSAAGDARDGGPKVMEIDLVKGGKGLGFSIAGGIGNQ HIPGDNGIYVTKLMDGGAAQVDGRLNIGDKLIAVRTNGSEKNLENVTHELAVATLKSI TDKVTLIIGKTQHLTTSASGGGGGGLSSGQQLSQSQSQLATSQSQSQVHQQQQQHQTP MVNSQSTAFMLCYTQDDANAEGGEIIYRVELPDMEQITLIYLENSDADYRKSSI" misc_feature 875..1045 /gene="dlg1" /note="Region: L27_1; pfam09058" /db_xref="CDD:462665" misc_feature 1511..1777 /gene="dlg1" /note="PDZ domain 1 of human discs large homolog 1 (Dlg1), Dlg2, and Dlg4, Drosophila disc large (Dlg), and related domains; Region: PDZ1_Dlg1-2-4-like; cd06723" /db_xref="CDD:467206" misc_feature order(1544..1564,1613..1615,1622..1624,1712..1714, 1724..1726,1733..1738) /gene="dlg1" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:467206" misc_feature 1853..2119 /gene="dlg1" /note="PDZ domain 2 of human discs large homolog 1 (Dlg1), Dlg2, and Dlg4, Drosophila disc large (Dlg), and related domains; Region: PDZ2_Dlg1-2-4-like; cd06724" /db_xref="CDD:467207" misc_feature order(1880..1900,1949..1951,1958..1960,2060..2062, 2072..2074,2081..2086) /gene="dlg1" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:467207" polyA_site 4707 /gene="dlg1" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gcgatacttg gaagcgacgg gacttgtaga cttggggacc acaaaaatgg attcagacac 61 ggatgattcg gaacgggaga agagcagcga tcccaacgag ggtctgctga gcagcgatga 121 taagaccttt cacgatgacg acgaggagga ggactcttcc ccagccgacg atgaggagga 181 gcccgagggt gaggagtcct tgctgccgca gcagcagaag aaagctcagc cattggtggt 241 tctggttgag tctggttcgg gggaagccat agaagaacct actgaagaaa tcgaaatcga 301 tcgggtgaca ttacccatta aagaagaaag ggaacccgat ccggaacccg aaccctcacc 361 cctcaaacac gacagtgtcc gcgagtccgt tgaatgcttc tattccgccc aggatctcct 421 ggaatatggc catatgctgt cctcctccgg aggctccata gttcgaacgc cggacgtgga 481 gtcggggtat ttcgagaagt ccgagagcga tgagggtgga cctccttcgt cctcctcctc 541 gctgggcgcc gcccgctgtc gtctgttgtc cggcatttcg ggactctcgc ccgtctcctc 601 ctcgtcgagc cgacacagtg ccgagggtct gcgaatggaa ctgagtcgtt tccgcaccat 661 gatcgaaacc ctcgagcggg agagtctcga gaagaccaag ggcaagccga agcccaggca 721 gagatcccaa ttgcaggtgg aatcggcggg ggaaagtggt tcggatcagg gttccgaaag 781 ggagatggaa aggggcttct ggtccacggt cttcggacag gcgggtctgg agatcagtca 841 ggatgaagac gagcggattg cggatattaa aaaagctcat cgggctctcg agctgctcga 901 ggactatcac gccaggctat cggagcccca ggatcgggca ctgcgtattg caatcgaacg 961 cgttatacgc atatttaaat ctcgcttgtt tcaagcgctg ttagatatac aagaattcta 1021 tgaattgaca ttattggatg actcgaagag catacagcaa aagacagcgg agaccttgca 1081 aattgcaacc aaatgggaga aggacggaca ggccgttaaa atagccgatt ttatcaaaac 1141 ttcaaattta aatcgcaatt gcgcctatga gtttaacaac gacgcctcat ccaatcaaac 1201 caaccaatca gccaatcaac tcaatcagaa tcagatcgcg aataatgtca gcgctcaggc 1261 gcaggccgaa gccctcagca gaacatttaa gagtgaattg gaagagatct tgaatcagcg 1321 aatgcgcatc gagtcggata cggaaaatgc gaaggagcca ccggctgagc agcagcagca 1381 gcgcagttcc cgctccccgc agcagaatcc gcaacagcag cagccgcaac agcaacagca 1441 gccgcaacag cagctgggat ccaagtcaag gagcgggtcg cagactgtaa acggcgatga 1501 tagctggttg tacgaggaca ttcagctgga gcgcggcaac tccggattgg gattctcgat 1561 tgccggcggc acggataatc cgcacatcgg caccgacacc tccatctaca tcaccaagct 1621 aatttccggc ggagcagctg ccgccgatgg acggctgagc atcaacgaca ttatcgtttc 1681 ggtgaacgag gtgtccgtgg tggatgtgcc gcatgcctcc gccgtggatg ccctgaaaaa 1741 ggccggcaat gtggtcaagt tgcatgtgaa gcgaaaacgt gacacggcgg ccaccactcc 1801 ggccgcagga tcggcggctg gagatgcccg cgatggtgga cccaaggtca tggaaatcga 1861 tctggtcaag ggcggcaagg gattgggctt ctcgattgcc ggcggcattg gcaaccagca 1921 catccccggc gacaatggca tctatgtgac caagctgatg gacggcggag cggcgcaggt 1981 ggacggacgt ctcaatatcg gcgacaaact cattgcagtg cgcaccaatg ggagcgaaaa 2041 gaatctggag aacgtaacgc acgaactggc ggtggccacg ctaaaatcga tcaccgacaa 2101 ggtgacgctg atcattggga agacgcagca cctgaccacc agtgcgtctg gcggcggagg 2161 aggaggcctc tcatccggac agcagttgtc gcagtcgcag tcgcagttgg ccaccagcca 2221 gagccaaagt caggtgcacc agcagcagca gcagcatcag acgccgatgg tcaattcgca 2281 gtcgacagcc tttatgcttt gctacacaca agacgatgcc aatgctgaag gaggcgagat 2341 tatctacagg gtggagttac ccgatatgga gcagataact ctgatctact tggagaatag 2401 tgatgcggac tatcgtaagt cgagcatctg aacaaccaac aatcacaaaa ataaaaaaaa 2461 aaaacaacca caagaaccaa cagcaaaata ttaaaaaaaa aaacaagtct attctctttt 2521 tgtaatacta gtgaaagtta caacaaagct tatgttttct tctacttaaa aaccaaaaaa 2581 ctaaaaacca aaaaaaaaaa aaacgaaaga atgaaagtta aatatttagt tatgaaaaca 2641 aagaaacaaa attttgcaag atcaattcct cttggttata tttttcgttc tttccttgat 2701 ttctgcctat ctcttgcttt gtctctctca ctcatgctgt ctcactccat ctctctgtct 2761 ctctctttct ctcgctctct gctatacatc tatctctatc gcgttttgtc cttagagaat 2821 ataaacttta aaaatatgta actttccgaa aggctttcag tagatcttgt ctttctttcc 2881 atcattattt tcattttgta taactgagtt taaacctagg ataagcctga aactctcttc 2941 ttgcaagtag aaccatattt tttatactgg cagagaaatt tcgttgatat ttaactatca 3001 tctaagacaa tcattatata agattaaact gaaaaaccaa ttcctggaca cacaacttga 3061 acaccgaata ttttgttgat catcgacctc atggtttgct tatgagttct taaactgttg 3121 tgaattgtgt tgatagttgc gtagaatcga atgatgatag atgataattt tgtgaatcca 3181 ccaaaaagaa cacacaactg aaacactcac acctgtatct gtatagtttg cctatttcta 3241 cttttatcct tttcctcttt ttctttttgg ttgccacatt gcatagtttc acccgagcag 3301 taacagaaaa gttgaccaaa ggatgcgaag atccttagag aaccctcttc ttttttttgt 3361 gatccttctg cctggatagt tgtttgtccc cgtccccttc ttagttctta gttagccaaa 3421 gaacacccac tcactttgcc ccgtcacaca tctatatata gattttgtat atagagtact 3481 ggatcgattc gaattcagtt tggtttgccg tttgattttc atgtattgct cgtctcgtgt 3541 cgcgtctttt gcatgtgcca cccgcctccc gaaccaccgc aaaaattgtt tctattcgag 3601 agggaaaata atatcagatt aagagaaccc ttcagagata ttttgtgaat taatcgcggg 3661 ttaagatgaa actactgaat aaaggaattg tacaaatcga gggagtttta tttgccttaa 3721 tcgatcagtt gttaatatcc aacccgtagc actcaacgta cgtgtgtctg taaatctata 3781 aattctacga ggcgtcaagt gagtaaaacc ccataatttc ccccttgaat ggtaaagagg 3841 aaagccaaaa aagaaatcca ataactgggt tctcatccaa cgccaaaatc taatcaccta 3901 agctagttct aatgatctca acataactat taccgtatac acccactcat aacacagagt 3961 ttcctaattc atgttgtcca attctttgtg tgccatgtat gtatgtaaga tcatgatgtc 4021 atgtatgtag tatgtaaccg tgtaaggcct tacccagtgt gcccactgtc tgttaactgt 4081 ttgctcgtag atcgcctgct ctatatgtct acatagccat catttctata tcctatatag 4141 tctatatggt atatagtata gttaccattc cgcatattgc attcacattg gttttttcgg 4201 ttcgatttcg tttttaagtt ttgatatcat ttcattgtat accctaagtt ttaagtgact 4261 tcttcttagg aacccccgaa ttattgcctt gattatgagt tttataagtt ttgcgccgcg 4321 cctcggtgaa tgcttgataa gtgaattaag tgaaacttga caagtattcg cttttaattt 4381 agtaaaattg caatttatac tgtacatttt tctgtgtgcg agagcttaaa ttaaacgaac 4441 ctaacttaga gatacaaact cttccactat tcccccctcc aaaataaccg tagaaagcaa 4501 ttgtatactt ctcttctaat tctaactgac ttgccgataa taataatata acccaatcca 4561 gttgcaatcc atagaccgaa atagatattt gttttgtaga gtacccaagt taatttctct 4621 aaagaaaaaa aaaagaaaaa aactattcca ttccgaaccc gaatcccaat ccgattccca 4681 ctcatttaga aaacactttg cgatgac