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LOCUS XM_017155662 5083 bp mRNA linear INV 09-DEC-2024 variant X20, mRNA. ACCESSION XM_017155662 VERSION XM_017155662.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017155662.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5083 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..5083 /gene="dlg1" /note="discs large 1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108066907" CDS 36..2954 /gene="dlg1" /codon_start=1 /product="disks large 1 tumor suppressor protein isoform X17" /protein_id="XP_017011151.2" /db_xref="GeneID:108066907" /translation="MDSDTDDSEREKSSDPNEGLLSSDDKTFHDDDEEEDSSPADDEE EPEGEESLLPQQQKKAQPLVVLVESGSGEAIEEPTEEIEIDRVTLPIKEEREPDPEPE PSPLKHDSVRESVECFYSAQDLLEYGHMLSSSGGSIVRTPDVESGYFEKSESDEGGPP SSSSSLGAARCRLLSGISGLSPVSSSSSRHSAEGLRMELSRFRTMIETLERESLEKTK GKPKPRQRSQLQVESAGESGSDQGSEREMERGFWSTVFGQAGLEISQDEDERIADIKK AHRALELLEDYHARLSEPQDRALRIAIERVIRIFKSRLFQALLDIQEFYELTLLDDSK SIQQKTAETLQIATKWEKDGQAVKIADFIKTSNLNRNCAYEFNNDASSNQTNQSANQL NQNQIANNVSAQAQAEALSRTFKSELEEILNQRMRIESDTENAKEPPAEQQQQRSSRS PQQNPQQQQPQQQQQPQQQLGSKSRSGSQTVNGDDSWLYEDIQLERGNSGLGFSIAGG TDNPHIGTDTSIYITKLISGGAAAADGRLSINDIIVSVNEVSVVDVPHASAVDALKKA GNVVKLHVKRKRDTAATTPAAGSAAGDARDGGPKVMEIDLVKGGKGLGFSIAGGIGNQ HIPGDNGIYVTKLMDGGAAQVDGRLNIGDKLIAVRTNGSEKNLENVTHELAVATLKSI TDKVTLIIGKTQHLTTSASGGGGGGLSSGQQLSQSQSQLATSQSQSQVHQQQQQHQTP MVNSQSTAFMLCYTQDDANAEGASEENVLSYEAVQRLSINYTRPVIILGPLKDRINDD LISEYPDKFGSCVPHTTRPKREYEVDGRDYHFVSSREQMERDIQNHLFIEAGQYNDNL YGTSVASVREVAEKGKHCILDVSGNAIKRLQVAQLYPVAVFIKPKSVDSVMEMNRRMT EEQAKKTYERAIKMEQEFGEYFTGVVQGDTIEEIYSKVKSMIWSQSGPTIWVPSKESL " misc_feature 864..1034 /gene="dlg1" /note="Region: L27_1; pfam09058" /db_xref="CDD:462665" misc_feature 1500..1766 /gene="dlg1" /note="PDZ domain 1 of human discs large homolog 1 (Dlg1), Dlg2, and Dlg4, Drosophila disc large (Dlg), and related domains; Region: PDZ1_Dlg1-2-4-like; cd06723" /db_xref="CDD:467206" misc_feature order(1533..1553,1602..1604,1611..1613,1701..1703, 1713..1715,1722..1727) /gene="dlg1" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:467206" misc_feature 1842..2108 /gene="dlg1" /note="PDZ domain 2 of human discs large homolog 1 (Dlg1), Dlg2, and Dlg4, Drosophila disc large (Dlg), and related domains; Region: PDZ2_Dlg1-2-4-like; cd06724" /db_xref="CDD:467207" misc_feature order(1869..1889,1938..1940,1947..1949,2049..2051, 2061..2063,2070..2075) /gene="dlg1" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:467207" misc_feature 2376..2912 /gene="dlg1" /note="Guanylate kinase; Region: Guanylate_kin; pfam00625" /db_xref="CDD:395500" polyA_site 5083 /gene="dlg1" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 aagcgacggg acttgtagac ttggggacca caaaaatgga ttcagacacg gatgattcgg 61 aacgggagaa gagcagcgat cccaacgagg gtctgctgag cagcgatgat aagacctttc 121 acgatgacga cgaggaggag gactcttccc cagccgacga tgaggaggag cccgagggtg 181 aggagtcctt gctgccgcag cagcagaaga aagctcagcc attggtggtt ctggttgagt 241 ctggttcggg ggaagccata gaagaaccta ctgaagaaat cgaaatcgat cgggtgacat 301 tacccattaa agaagaaagg gaacccgatc cggaacccga accctcaccc ctcaaacacg 361 acagtgtccg cgagtccgtt gaatgcttct attccgccca ggatctcctg gaatatggcc 421 atatgctgtc ctcctccgga ggctccatag ttcgaacgcc ggacgtggag tcggggtatt 481 tcgagaagtc cgagagcgat gagggtggac ctccttcgtc ctcctcctcg ctgggcgccg 541 cccgctgtcg tctgttgtcc ggcatttcgg gactctcgcc cgtctcctcc tcgtcgagcc 601 gacacagtgc cgagggtctg cgaatggaac tgagtcgttt ccgcaccatg atcgaaaccc 661 tcgagcggga gagtctcgag aagaccaagg gcaagccgaa gcccaggcag agatcccaat 721 tgcaggtgga atcggcgggg gaaagtggtt cggatcaggg ttccgaaagg gagatggaaa 781 ggggcttctg gtccacggtc ttcggacagg cgggtctgga gatcagtcag gatgaagacg 841 agcggattgc ggatattaaa aaagctcatc gggctctcga gctgctcgag gactatcacg 901 ccaggctatc ggagccccag gatcgggcac tgcgtattgc aatcgaacgc gttatacgca 961 tatttaaatc tcgcttgttt caagcgctgt tagatataca agaattctat gaattgacat 1021 tattggatga ctcgaagagc atacagcaaa agacagcgga gaccttgcaa attgcaacca 1081 aatgggagaa ggacggacag gccgttaaaa tagccgattt tatcaaaact tcaaatttaa 1141 atcgcaattg cgcctatgag tttaacaacg acgcctcatc caatcaaacc aaccaatcag 1201 ccaatcaact caatcagaat cagatcgcga ataatgtcag cgctcaggcg caggccgaag 1261 ccctcagcag aacatttaag agtgaattgg aagagatctt gaatcagcga atgcgcatcg 1321 agtcggatac ggaaaatgcg aaggagccac cggctgagca gcagcagcag cgcagttccc 1381 gctccccgca gcagaatccg caacagcagc agccgcaaca gcaacagcag ccgcaacagc 1441 agctgggatc caagtcaagg agcgggtcgc agactgtaaa cggcgatgat agctggttgt 1501 acgaggacat tcagctggag cgcggcaact ccggattggg attctcgatt gccggcggca 1561 cggataatcc gcacatcggc accgacacct ccatctacat caccaagcta atttccggcg 1621 gagcagctgc cgccgatgga cggctgagca tcaacgacat tatcgtttcg gtgaacgagg 1681 tgtccgtggt ggatgtgccg catgcctccg ccgtggatgc cctgaaaaag gccggcaatg 1741 tggtcaagtt gcatgtgaag cgaaaacgtg acacggcggc caccactccg gccgcaggat 1801 cggcggctgg agatgcccgc gatggtggac ccaaggtcat ggaaatcgat ctggtcaagg 1861 gcggcaaggg attgggcttc tcgattgccg gcggcattgg caaccagcac atccccggcg 1921 acaatggcat ctatgtgacc aagctgatgg acggcggagc ggcgcaggtg gacggacgtc 1981 tcaatatcgg cgacaaactc attgcagtgc gcaccaatgg gagcgaaaag aatctggaga 2041 acgtaacgca cgaactggcg gtggccacgc taaaatcgat caccgacaag gtgacgctga 2101 tcattgggaa gacgcagcac ctgaccacca gtgcgtctgg cggcggagga ggaggcctct 2161 catccggaca gcagttgtcg cagtcgcagt cgcagttggc caccagccag agccaaagtc 2221 aggtgcacca gcagcagcag cagcatcaga cgccgatggt caattcgcag tcgacagcct 2281 ttatgctttg ctacacacaa gacgatgcca atgctgaagg agcttccgag gagaacgtcc 2341 tgtcctacga ggccgtgcag cgcctgtcca tcaactacac gcgccctgtg attattctgg 2401 ggccgctgaa ggatcgcatc aacgatgacc taatatcgga gtatcccgac aagtttggat 2461 cctgtgtgcc acacaccacc cgacccaagc gggagtacga ggtggacggc agggactatc 2521 actttgtgtc ctcgcgcgag caaatggagc gggacatcca gaaccatctg ttcatcgagg 2581 cgggccaata taacgacaat ctgtacggca catcggtggc cagtgtgcgc gaggtggcgg 2641 agaagggcaa gcactgcatc ctggacgtgt ccgggaatgc cataaagcgc ctccaggtgg 2701 cccagctcta tcccgttgca gtgttcatca agcccaagtc ggtggattcg gtgatggaga 2761 tgaatcgtcg catgacggag gagcaggcca agaagacgta cgagcgggcg attaaaatgg 2821 agcaggaatt cggcgaatac tttaccggcg ttgtccaggg cgacaccatc gaggagatct 2881 acagcaaagt gaagtcgatg atttggtccc agtcgggacc aaccatttgg gtaccttcca 2941 aggaatctct atgaccaaca gccaccacaa cttggacact gccgcctcga gttcgatgcc 3001 gaccggtctc gagaacaaca ataggagcaa cggcggcagc agcaacaaat cagcagccgc 3061 actgatgatg catcacagta gcaacaacag aagcagcaac agcaacaaca actactacaa 3121 cagcagaagc agccacagca acagcaacaa caacaactac agtactactg acaacgacag 3181 gaaacggaaa cagaaactag aaaaccagaa aacagaacca ctgactactt agaaacttaa 3241 ccgacagaca gtaaaattta tattgacgca gccgcagcag ccaacttaat gtagcaaatt 3301 gtccaaagca attttatttg gatgcactca ttgatgtacg gtcaggtgaa cgtacatccc 3361 agcagctaga cgaggatggg cgaacatcag agcaaagcat ttggcatttg gcaacgtagg 3421 gaagatgaga tgatgagatg ggtgttcaaa ctgaagcgga caaaggtgta tagtttttag 3481 ttagaacaaa gttggatata aacaaaaaaa aaagataaag aagcgaaata tataatatat 3541 atacacacca cttatataga ctaagatccg attatataaa agcatagaga tgatcagacg 3601 aggagacgag ggctttaggg agttcgttaa gcgctagagt gttgtttgtt tatgttgatg 3661 tttatatacg agagccaaga gttatagcga gttagttatg ttgacgataa tgtgtttttt 3721 gatatatatt gatctatatg aaatatgtat tgcctggtgg ttaactttaa gtacgacaat 3781 gtttagtagc tgactacgaa taatgacgac gataatgacg ggacgcagat gcggaggcgg 3841 atgcgaatgc ggatgcggtt acggttgcgg atctagcgga aagtcagata atgacgagaa 3901 taacgattta cgattacgat tacgatctaa tgataatgat ataatatata tattgatgaa 3961 tatcgaagct aataacgaga tgaagaagaa cgttggtgca tttgttgtta gatgtatgta 4021 atttttccca ctcgcctttg cctaaagcaa cacaaaagta aaaaaaaagt aaaaaaacca 4081 agaagaaaac agaaaactaa accgaaatca ataaacatgc gtatgataaa tactagaaac 4141 tagcggaaaa gttgcatata aaaccataga cattcattca cacatctact tactatatat 4201 atatatatat ctgtaccatt tagcctatag tccgcaagag atcgtcgaaa caaagtcatt 4261 ttactatata aatatacaca aaacacccgc ataatgtaaa cttggtgtgc agagagaaaa 4321 ggaaaaagaa gaagaagtga gaaaaaagcg agaggagtgg agaaatcgaa tggaatttgt 4381 tgtcgcgttg atttaaatct atataatgag taaaatattg tatatttaac aatctatgaa 4441 acaaatatag tatgtagata aaacacacac acacacatac acacgaacac gaacccatac 4501 aagcatacat ggattaccgt tgcggtctaa ttttatacac acaaacacac aagacaaatc 4561 gaattgcaaa ggcaaataaa taattaaata agaaagcgaa aaagaagaag aagcagaagc 4621 ggaaacggaa gtgacgccaa gaagaagaag aagcgagctg gagatgagat caactcaaac 4681 tagataacta tacatatatt tgctgattaa tttatattta tataaaccaa tctacgattt 4741 atagccaacg cacagaaaaa acaaacaaaa cacattcgaa atttgttcga aaaaatttag 4801 caaaattcaa gttgagtgtt aacattatta tccatgcgaa tatgcttgaa aatattatta 4861 ttttctactc tgtccatcgt ctctcttgct tcccttctta catacatact tactacttga 4921 aacatttttt tatttgtatt taattttttt tttttatatt gcaaaaacgt cgcaaaaacg 4981 acgccacagc agcagcagct atggatatta tttcaaaaat atatacatat aactattgta 5041 cgaaataaag agaatacaaa ttgattataa ttttcacaat gta