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LOCUS XM_017155660 5561 bp mRNA linear INV 09-DEC-2024 variant X15, mRNA. ACCESSION XM_017155660 VERSION XM_017155660.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017155660.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5561 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..5561 /gene="dlg1" /note="discs large 1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108066907" CDS 490..3432 /gene="dlg1" /codon_start=1 /product="disks large 1 tumor suppressor protein isoform X14" /protein_id="XP_017011149.2" /db_xref="GeneID:108066907" /translation="MTTRKKKRDGGGSGGGFIKKVSSLFNLDSLHKASSAKVNGDDSW LYEDIQLERGNSGLGFSIAGGTDNPHIGTDTSIYITKLISGGAAAADGRLSINDIIVS VNEVSVVDVPHASAVDALKKAGNVVKLHVKRKRDTAATTPAAGSAAGDARDGGPKVME IDLVKGGKGLGFSIAGGIGNQHIPGDNGIYVTKLMDGGAAQVDGRLNIGDKLIAVRTN GSEKNLENVTHELAVATLKSITDKVTLIIGKTQHLTTSASGGGGGGLSSGQQLSQSQS QLATSQSQSQVHQQQQQHQTPMVNSQSTGALNSVGHTVVDSPPSPITPQAAAATASVI ASNTTVTTVTATNSSSKLPPLLIGANSNSNINSNSNSNSNSNNINNNSSSSSTTAIVA TAAAATPPASFYNNNASMPALPVESNQTNNRSQSPQPRQPGSRYASTNVLAAVPPGTP RAVSTEDITREPRTITIQKGPQGLGFNIVGGEDGQGIYVSFILAGGPADLGSELKRGD QLLSVNNVNLTHATHEEAAQALKTSGGVVTLLAQYRPEEYNRFEARIQELKQQAALGA GGSGTLLRTTQKRSLYVRALFDYDPNRDDGLPSRGLPFKHGDILHVTNASDDEWWQAR RVLGDNEDEQIGIVPSKRRWERKMRARDRSVKFQGHAAANNNVDKQSTLDRKKKNFTF SRKFPFMKSRDEKNEDGSDQEPNGVVSSTSELDINSVNNNQANEPQPFMLCYTQDDAN AEGGEIIYRVELPDMEQITLIYLENSDADYPSEENVLSYEAVQRLSINYTRPVIILGP LKDRINDDLISEYPDKFGSCVPHTTRPKREYEVDGRDYHFVSSREQMERDIQNHLFIE AGQYNDNLYGTSVASVREVAEKGKHCILDVSGNAIKRLQVAQLYPVAVFIKPKSVDSV MEMNRRMTEEQAKKTYERAIKMEQEFGEYFTGVVQGDTIEEIYSKVKSMIWSQSGPTI WVPSKESL" misc_feature 625..891 /gene="dlg1" /note="PDZ domain 1 of human discs large homolog 1 (Dlg1), Dlg2, and Dlg4, Drosophila disc large (Dlg), and related domains; Region: PDZ1_Dlg1-2-4-like; cd06723" /db_xref="CDD:467206" misc_feature order(658..678,727..729,736..738,826..828,838..840, 847..852) /gene="dlg1" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:467206" misc_feature 967..1233 /gene="dlg1" /note="PDZ domain 2 of human discs large homolog 1 (Dlg1), Dlg2, and Dlg4, Drosophila disc large (Dlg), and related domains; Region: PDZ2_Dlg1-2-4-like; cd06724" /db_xref="CDD:467207" misc_feature order(994..1014,1063..1065,1072..1074,1174..1176, 1186..1188,1195..1200) /gene="dlg1" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:467207" misc_feature 1870..2142 /gene="dlg1" /note="PDZ domain 3 of human discs large homolog 1 (Dlg1), Dlg2, and Dlg4, Drosophila disc large (Dlg), and related domains; Region: PDZ3_Dlg1-2-4-like; cd06795" /db_xref="CDD:467257" misc_feature order(1906..1926,1957..1959,1966..1968,2056..2058, 2068..2070,2077..2082) /gene="dlg1" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:467257" misc_feature 2233..2415 /gene="dlg1" /note="Src Homology 3 domain of Disks large homolog proteins; Region: SH3_DLG-like; cd11861" /db_xref="CDD:212795" misc_feature order(2239..2241,2305..2310) /gene="dlg1" /note="GuK domain interface [polypeptide binding]; other site" /db_xref="CDD:212795" misc_feature order(2248..2250,2254..2256,2263..2265,2290..2292, 2344..2349,2404..2406,2410..2415) /gene="dlg1" /note="peptide ligand binding site [polypeptide binding]; other site" /db_xref="CDD:212795" misc_feature 2854..3390 /gene="dlg1" /note="Guanylate kinase; Region: Guanylate_kin; pfam00625" /db_xref="CDD:395500" polyA_site 5561 /gene="dlg1" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cggtcctact ctcgtctatc gatagtcgga ctatttgggt gtgttgtttt cgtcgtcgcg 61 ttcgtttaaa tgcaattttt ttgtttgttt gtttggtttg gtgcaacgga aatgtgaaca 121 caagtatatc aaattgcgtg catcgtccat gagtcactgg catatattgt taaattggtg 181 atttataact ggagtgtggg aaagagagcg agcattgcca gcgcgagcga taacgatagg 241 cagaaatgcc agcgaatgca gaaagttgga taaccactgg cggcaaagtg ggcaaaaggc 301 gaataaaata gtaacgaagc gaagcgaccg agaagaagaa gaagcagcag cgccggcttt 361 tgtccgtgtg ttggtgtctg cgcgtgtgcg tgtgtgtgtg tggccattcc gccactcttt 421 aacccttgaa ctgcccataa aagtggaaat ataaataaca aatataattg aataaaagcc 481 gaagcgacga tgacaacaag gaagaagaag cgcgacggcg gcggcagcgg cggcggattc 541 atcaagaaag tctcgtcgct cttcaatctg gactcgctcc ataaggcgtc gtcggcaaag 601 gtaaacggcg atgatagctg gttgtacgag gacattcagc tggagcgcgg caactccgga 661 ttgggattct cgattgccgg cggcacggat aatccgcaca tcggcaccga cacctccatc 721 tacatcacca agctaatttc cggcggagca gctgccgccg atggacggct gagcatcaac 781 gacattatcg tttcggtgaa cgaggtgtcc gtggtggatg tgccgcatgc ctccgccgtg 841 gatgccctga aaaaggccgg caatgtggtc aagttgcatg tgaagcgaaa acgtgacacg 901 gcggccacca ctccggccgc aggatcggcg gctggagatg cccgcgatgg tggacccaag 961 gtcatggaaa tcgatctggt caagggcggc aagggattgg gcttctcgat tgccggcggc 1021 attggcaacc agcacatccc cggcgacaat ggcatctatg tgaccaagct gatggacggc 1081 ggagcggcgc aggtggacgg acgtctcaat atcggcgaca aactcattgc agtgcgcacc 1141 aatgggagcg aaaagaatct ggagaacgta acgcacgaac tggcggtggc cacgctaaaa 1201 tcgatcaccg acaaggtgac gctgatcatt gggaagacgc agcacctgac caccagtgcg 1261 tctggcggcg gaggaggagg cctctcatcc ggacagcagt tgtcgcagtc gcagtcgcag 1321 ttggccacca gccagagcca aagtcaggtg caccagcagc agcagcagca tcagacgccg 1381 atggtcaatt cgcagtcgac aggtgcgcta aatagtgtgg gacatacggt tgtcgattct 1441 ccaccatcac caataacacc acaagcagca gcagcaactg catcagtcat tgcaagcaac 1501 acaacagtca ccacagtcac agccaccaac agtagcagca agttgccgcc tttgctaatt 1561 ggcgccaaca gtaatagcaa tatcaatagc aatagcaaca gcaacagcaa cagcaataac 1621 atcaacaaca acagcagtag cagcagcacg acggcaattg ttgcaacagc ggcagcagca 1681 actccacccg cctccttcta taacaataat gcttccatgc ccgccctgcc tgtcgaatcc 1741 aatcaaacaa acaaccgatc ccaatcaccc cagccgcgcc agcccggctc gcgatatgcc 1801 tccacaaatg tcctggccgc cgttccgcca ggaactccgc gcgcagtcag caccgaggat 1861 ataaccagag aaccgcgcac catcaccata cagaagggac cccagggcct gggcttcaat 1921 atcgttggcg gcgaggatgg ccagggcatc tatgtgtcct tcatcctggc cggcggtcca 1981 gccgatctcg gatcggagct gaagcgcggc gaccagctgc tcagcgtgaa caatgtcaat 2041 ctcacgcatg ccacccacga ggaggcggcc caggcgctca agacttctgg cggcgtggtg 2101 accctgctgg cgcagtaccg acccgaggag tacaaccgct tcgaggcgcg catccaggag 2161 ctgaaacagc aggctgccct cggcgccggc ggatcgggaa ccctgctgcg caccacgcag 2221 aagcgatcgc tctatgtgcg cgccctgttc gactacgatc ccaatcggga cgacggcctg 2281 ccctcgcggg gattgccctt caagcacggc gacatcctgc acgtgaccaa tgcctccgac 2341 gacgaatggt ggcaggcgcg acgcgttctc ggcgacaacg aggacgagca gatcggcatt 2401 gtgccgtcga agaggcgctg ggagcgcaag atgcgggctc gggatcgcag cgtcaagttc 2461 cagggccatg cggcagccaa taataatgtg gataagcaat cgacattgga tcgaaagaaa 2521 aagaatttca cattctcgcg caaatttccg tttatgaaga gtcgcgatga gaagaatgaa 2581 gatggcagcg accaagagcc caatggagtt gtgagcagca ccagcgaact cgacatcaat 2641 agtgtcaaca acaatcaggc gaatgaaccg caacccttta tgctttgcta cacacaagac 2701 gatgccaatg ctgaaggagg cgagattatc tacagggtgg agttacccga tatggagcag 2761 ataactctga tctacttgga gaatagtgat gcggactatc cttccgagga gaacgtcctg 2821 tcctacgagg ccgtgcagcg cctgtccatc aactacacgc gccctgtgat tattctgggg 2881 ccgctgaagg atcgcatcaa cgatgaccta atatcggagt atcccgacaa gtttggatcc 2941 tgtgtgccac acaccacccg acccaagcgg gagtacgagg tggacggcag ggactatcac 3001 tttgtgtcct cgcgcgagca aatggagcgg gacatccaga accatctgtt catcgaggcg 3061 ggccaatata acgacaatct gtacggcaca tcggtggcca gtgtgcgcga ggtggcggag 3121 aagggcaagc actgcatcct ggacgtgtcc gggaatgcca taaagcgcct ccaggtggcc 3181 cagctctatc ccgttgcagt gttcatcaag cccaagtcgg tggattcggt gatggagatg 3241 aatcgtcgca tgacggagga gcaggccaag aagacgtacg agcgggcgat taaaatggag 3301 caggaattcg gcgaatactt taccggcgtt gtccagggcg acaccatcga ggagatctac 3361 agcaaagtga agtcgatgat ttggtcccag tcgggaccaa ccatttgggt accttccaag 3421 gaatctctat gaccaacagc caccacaact tggacactgc cgcctcgagt tcgatgccga 3481 ccggtctcga gaacaacaat aggagcaacg gcggcagcag caacaaatca gcagccgcac 3541 tgatgatgca tcacagtagc aacaacagaa gcagcaacag caacaacaac tactacaaca 3601 gcagaagcag ccacagcaac agcaacaaca acaactacag tactactgac aacgacagga 3661 aacggaaaca gaaactagaa aaccagaaaa cagaaccact gactacttag aaacttaacc 3721 gacagacagt aaaatttata ttgacgcagc cgcagcagcc aacttaatgt agcaaattgt 3781 ccaaagcaat tttatttgga tgcactcatt gatgtacggt caggtgaacg tacatcccag 3841 cagctagacg aggatgggcg aacatcagag caaagcattt ggcatttggc aacgtaggga 3901 agatgagatg atgagatggg tgttcaaact gaagcggaca aaggtgtata gtttttagtt 3961 agaacaaagt tggatataaa caaaaaaaaa agataaagaa gcgaaatata taatatatat 4021 acacaccact tatatagact aagatccgat tatataaaag catagagatg atcagacgag 4081 gagacgaggg ctttagggag ttcgttaagc gctagagtgt tgtttgttta tgttgatgtt 4141 tatatacgag agccaagagt tatagcgagt tagttatgtt gacgataatg tgttttttga 4201 tatatattga tctatatgaa atatgtattg cctggtggtt aactttaagt acgacaatgt 4261 ttagtagctg actacgaata atgacgacga taatgacggg acgcagatgc ggaggcggat 4321 gcgaatgcgg atgcggttac ggttgcggat ctagcggaaa gtcagataat gacgagaata 4381 acgatttacg attacgatta cgatctaatg ataatgatat aatatatata ttgatgaata 4441 tcgaagctaa taacgagatg aagaagaacg ttggtgcatt tgttgttaga tgtatgtaat 4501 ttttcccact cgcctttgcc taaagcaaca caaaagtaaa aaaaaagtaa aaaaaccaag 4561 aagaaaacag aaaactaaac cgaaatcaat aaacatgcgt atgataaata ctagaaacta 4621 gcggaaaagt tgcatataaa accatagaca ttcattcaca catctactta ctatatatat 4681 atatatatct gtaccattta gcctatagtc cgcaagagat cgtcgaaaca aagtcatttt 4741 actatataaa tatacacaaa acacccgcat aatgtaaact tggtgtgcag agagaaaagg 4801 aaaaagaaga agaagtgaga aaaaagcgag aggagtggag aaatcgaatg gaatttgttg 4861 tcgcgttgat ttaaatctat ataatgagta aaatattgta tatttaacaa tctatgaaac 4921 aaatatagta tgtagataaa acacacacac acacatacac acgaacacga acccatacaa 4981 gcatacatgg attaccgttg cggtctaatt ttatacacac aaacacacaa gacaaatcga 5041 attgcaaagg caaataaata attaaataag aaagcgaaaa agaagaagaa gcagaagcgg 5101 aaacggaagt gacgccaaga agaagaagaa gcgagctgga gatgagatca actcaaacta 5161 gataactata catatatttg ctgattaatt tatatttata taaaccaatc tacgatttat 5221 agccaacgca cagaaaaaac aaacaaaaca cattcgaaat ttgttcgaaa aaatttagca 5281 aaattcaagt tgagtgttaa cattattatc catgcgaata tgcttgaaaa tattattatt 5341 ttctactctg tccatcgtct ctcttgcttc ccttcttaca tacatactta ctacttgaaa 5401 cattttttta tttgtattta attttttttt tttatattgc aaaaacgtcg caaaaacgac 5461 gccacagcag cagcagctat ggatattatt tcaaaaatat atacatataa ctattgtacg 5521 aaataaagag aatacaaatt gattataatt ttcacaatgt a