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LOCUS XM_017155657 5482 bp mRNA linear INV 09-DEC-2024 variant X16, mRNA. ACCESSION XM_017155657 VERSION XM_017155657.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017155657.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5482 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..5482 /gene="dlg1" /note="discs large 1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108066907" CDS 411..3353 /gene="dlg1" /codon_start=1 /product="disks large 1 tumor suppressor protein isoform X14" /protein_id="XP_017011146.2" /db_xref="GeneID:108066907" /translation="MTTRKKKRDGGGSGGGFIKKVSSLFNLDSLHKASSAKVNGDDSW LYEDIQLERGNSGLGFSIAGGTDNPHIGTDTSIYITKLISGGAAAADGRLSINDIIVS VNEVSVVDVPHASAVDALKKAGNVVKLHVKRKRDTAATTPAAGSAAGDARDGGPKVME IDLVKGGKGLGFSIAGGIGNQHIPGDNGIYVTKLMDGGAAQVDGRLNIGDKLIAVRTN GSEKNLENVTHELAVATLKSITDKVTLIIGKTQHLTTSASGGGGGGLSSGQQLSQSQS QLATSQSQSQVHQQQQQHQTPMVNSQSTGALNSVGHTVVDSPPSPITPQAAAATASVI ASNTTVTTVTATNSSSKLPPLLIGANSNSNINSNSNSNSNSNNINNNSSSSSTTAIVA TAAAATPPASFYNNNASMPALPVESNQTNNRSQSPQPRQPGSRYASTNVLAAVPPGTP RAVSTEDITREPRTITIQKGPQGLGFNIVGGEDGQGIYVSFILAGGPADLGSELKRGD QLLSVNNVNLTHATHEEAAQALKTSGGVVTLLAQYRPEEYNRFEARIQELKQQAALGA GGSGTLLRTTQKRSLYVRALFDYDPNRDDGLPSRGLPFKHGDILHVTNASDDEWWQAR RVLGDNEDEQIGIVPSKRRWERKMRARDRSVKFQGHAAANNNVDKQSTLDRKKKNFTF SRKFPFMKSRDEKNEDGSDQEPNGVVSSTSELDINSVNNNQANEPQPFMLCYTQDDAN AEGGEIIYRVELPDMEQITLIYLENSDADYPSEENVLSYEAVQRLSINYTRPVIILGP LKDRINDDLISEYPDKFGSCVPHTTRPKREYEVDGRDYHFVSSREQMERDIQNHLFIE AGQYNDNLYGTSVASVREVAEKGKHCILDVSGNAIKRLQVAQLYPVAVFIKPKSVDSV MEMNRRMTEEQAKKTYERAIKMEQEFGEYFTGVVQGDTIEEIYSKVKSMIWSQSGPTI WVPSKESL" misc_feature 546..812 /gene="dlg1" /note="PDZ domain 1 of human discs large homolog 1 (Dlg1), Dlg2, and Dlg4, Drosophila disc large (Dlg), and related domains; Region: PDZ1_Dlg1-2-4-like; cd06723" /db_xref="CDD:467206" misc_feature order(579..599,648..650,657..659,747..749,759..761, 768..773) /gene="dlg1" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:467206" misc_feature 888..1154 /gene="dlg1" /note="PDZ domain 2 of human discs large homolog 1 (Dlg1), Dlg2, and Dlg4, Drosophila disc large (Dlg), and related domains; Region: PDZ2_Dlg1-2-4-like; cd06724" /db_xref="CDD:467207" misc_feature order(915..935,984..986,993..995,1095..1097,1107..1109, 1116..1121) /gene="dlg1" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:467207" misc_feature 1791..2063 /gene="dlg1" /note="PDZ domain 3 of human discs large homolog 1 (Dlg1), Dlg2, and Dlg4, Drosophila disc large (Dlg), and related domains; Region: PDZ3_Dlg1-2-4-like; cd06795" /db_xref="CDD:467257" misc_feature order(1827..1847,1878..1880,1887..1889,1977..1979, 1989..1991,1998..2003) /gene="dlg1" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:467257" misc_feature 2154..2336 /gene="dlg1" /note="Src Homology 3 domain of Disks large homolog proteins; Region: SH3_DLG-like; cd11861" /db_xref="CDD:212795" misc_feature order(2160..2162,2226..2231) /gene="dlg1" /note="GuK domain interface [polypeptide binding]; other site" /db_xref="CDD:212795" misc_feature order(2169..2171,2175..2177,2184..2186,2211..2213, 2265..2270,2325..2327,2331..2336) /gene="dlg1" /note="peptide ligand binding site [polypeptide binding]; other site" /db_xref="CDD:212795" misc_feature 2775..3311 /gene="dlg1" /note="Guanylate kinase; Region: Guanylate_kin; pfam00625" /db_xref="CDD:395500" polyA_site 5482 /gene="dlg1" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cggtcctact ctcgtctatc gatagtcgga ctatttgggt gtgttgtttt cgtcgtcgcg 61 ttcgtttaaa tgcaattttt ttgtttgttt gtttggtttg gtgcaacgga aatgtgaaca 121 caagtatatc aaattgcgtg catcgtccat gagtcactgg catatattgt taaattgtgc 181 agaaagttgg ataaccactg gcggcaaagt gggcaaaagg cgaataaaat agtaacgaag 241 cgaagcgacc gagaagaaga agaagcagca gcgccggctt ttgtccgtgt gttggtgtct 301 gcgcgtgtgc gtgtgtgtgt gtggccattc cgccactctt taacccttga actgcccata 361 aaagtggaaa tataaataac aaatataatt gaataaaagc cgaagcgacg atgacaacaa 421 ggaagaagaa gcgcgacggc ggcggcagcg gcggcggatt catcaagaaa gtctcgtcgc 481 tcttcaatct ggactcgctc cataaggcgt cgtcggcaaa ggtaaacggc gatgatagct 541 ggttgtacga ggacattcag ctggagcgcg gcaactccgg attgggattc tcgattgccg 601 gcggcacgga taatccgcac atcggcaccg acacctccat ctacatcacc aagctaattt 661 ccggcggagc agctgccgcc gatggacggc tgagcatcaa cgacattatc gtttcggtga 721 acgaggtgtc cgtggtggat gtgccgcatg cctccgccgt ggatgccctg aaaaaggccg 781 gcaatgtggt caagttgcat gtgaagcgaa aacgtgacac ggcggccacc actccggccg 841 caggatcggc ggctggagat gcccgcgatg gtggacccaa ggtcatggaa atcgatctgg 901 tcaagggcgg caagggattg ggcttctcga ttgccggcgg cattggcaac cagcacatcc 961 ccggcgacaa tggcatctat gtgaccaagc tgatggacgg cggagcggcg caggtggacg 1021 gacgtctcaa tatcggcgac aaactcattg cagtgcgcac caatgggagc gaaaagaatc 1081 tggagaacgt aacgcacgaa ctggcggtgg ccacgctaaa atcgatcacc gacaaggtga 1141 cgctgatcat tgggaagacg cagcacctga ccaccagtgc gtctggcggc ggaggaggag 1201 gcctctcatc cggacagcag ttgtcgcagt cgcagtcgca gttggccacc agccagagcc 1261 aaagtcaggt gcaccagcag cagcagcagc atcagacgcc gatggtcaat tcgcagtcga 1321 caggtgcgct aaatagtgtg ggacatacgg ttgtcgattc tccaccatca ccaataacac 1381 cacaagcagc agcagcaact gcatcagtca ttgcaagcaa cacaacagtc accacagtca 1441 cagccaccaa cagtagcagc aagttgccgc ctttgctaat tggcgccaac agtaatagca 1501 atatcaatag caatagcaac agcaacagca acagcaataa catcaacaac aacagcagta 1561 gcagcagcac gacggcaatt gttgcaacag cggcagcagc aactccaccc gcctccttct 1621 ataacaataa tgcttccatg cccgccctgc ctgtcgaatc caatcaaaca aacaaccgat 1681 cccaatcacc ccagccgcgc cagcccggct cgcgatatgc ctccacaaat gtcctggccg 1741 ccgttccgcc aggaactccg cgcgcagtca gcaccgagga tataaccaga gaaccgcgca 1801 ccatcaccat acagaaggga ccccagggcc tgggcttcaa tatcgttggc ggcgaggatg 1861 gccagggcat ctatgtgtcc ttcatcctgg ccggcggtcc agccgatctc ggatcggagc 1921 tgaagcgcgg cgaccagctg ctcagcgtga acaatgtcaa tctcacgcat gccacccacg 1981 aggaggcggc ccaggcgctc aagacttctg gcggcgtggt gaccctgctg gcgcagtacc 2041 gacccgagga gtacaaccgc ttcgaggcgc gcatccagga gctgaaacag caggctgccc 2101 tcggcgccgg cggatcggga accctgctgc gcaccacgca gaagcgatcg ctctatgtgc 2161 gcgccctgtt cgactacgat cccaatcggg acgacggcct gccctcgcgg ggattgccct 2221 tcaagcacgg cgacatcctg cacgtgacca atgcctccga cgacgaatgg tggcaggcgc 2281 gacgcgttct cggcgacaac gaggacgagc agatcggcat tgtgccgtcg aagaggcgct 2341 gggagcgcaa gatgcgggct cgggatcgca gcgtcaagtt ccagggccat gcggcagcca 2401 ataataatgt ggataagcaa tcgacattgg atcgaaagaa aaagaatttc acattctcgc 2461 gcaaatttcc gtttatgaag agtcgcgatg agaagaatga agatggcagc gaccaagagc 2521 ccaatggagt tgtgagcagc accagcgaac tcgacatcaa tagtgtcaac aacaatcagg 2581 cgaatgaacc gcaacccttt atgctttgct acacacaaga cgatgccaat gctgaaggag 2641 gcgagattat ctacagggtg gagttacccg atatggagca gataactctg atctacttgg 2701 agaatagtga tgcggactat ccttccgagg agaacgtcct gtcctacgag gccgtgcagc 2761 gcctgtccat caactacacg cgccctgtga ttattctggg gccgctgaag gatcgcatca 2821 acgatgacct aatatcggag tatcccgaca agtttggatc ctgtgtgcca cacaccaccc 2881 gacccaagcg ggagtacgag gtggacggca gggactatca ctttgtgtcc tcgcgcgagc 2941 aaatggagcg ggacatccag aaccatctgt tcatcgaggc gggccaatat aacgacaatc 3001 tgtacggcac atcggtggcc agtgtgcgcg aggtggcgga gaagggcaag cactgcatcc 3061 tggacgtgtc cgggaatgcc ataaagcgcc tccaggtggc ccagctctat cccgttgcag 3121 tgttcatcaa gcccaagtcg gtggattcgg tgatggagat gaatcgtcgc atgacggagg 3181 agcaggccaa gaagacgtac gagcgggcga ttaaaatgga gcaggaattc ggcgaatact 3241 ttaccggcgt tgtccagggc gacaccatcg aggagatcta cagcaaagtg aagtcgatga 3301 tttggtccca gtcgggacca accatttggg taccttccaa ggaatctcta tgaccaacag 3361 ccaccacaac ttggacactg ccgcctcgag ttcgatgccg accggtctcg agaacaacaa 3421 taggagcaac ggcggcagca gcaacaaatc agcagccgca ctgatgatgc atcacagtag 3481 caacaacaga agcagcaaca gcaacaacaa ctactacaac agcagaagca gccacagcaa 3541 cagcaacaac aacaactaca gtactactga caacgacagg aaacggaaac agaaactaga 3601 aaaccagaaa acagaaccac tgactactta gaaacttaac cgacagacag taaaatttat 3661 attgacgcag ccgcagcagc caacttaatg tagcaaattg tccaaagcaa ttttatttgg 3721 atgcactcat tgatgtacgg tcaggtgaac gtacatccca gcagctagac gaggatgggc 3781 gaacatcaga gcaaagcatt tggcatttgg caacgtaggg aagatgagat gatgagatgg 3841 gtgttcaaac tgaagcggac aaaggtgtat agtttttagt tagaacaaag ttggatataa 3901 acaaaaaaaa aagataaaga agcgaaatat ataatatata tacacaccac ttatatagac 3961 taagatccga ttatataaaa gcatagagat gatcagacga ggagacgagg gctttaggga 4021 gttcgttaag cgctagagtg ttgtttgttt atgttgatgt ttatatacga gagccaagag 4081 ttatagcgag ttagttatgt tgacgataat gtgttttttg atatatattg atctatatga 4141 aatatgtatt gcctggtggt taactttaag tacgacaatg tttagtagct gactacgaat 4201 aatgacgacg ataatgacgg gacgcagatg cggaggcgga tgcgaatgcg gatgcggtta 4261 cggttgcgga tctagcggaa agtcagataa tgacgagaat aacgatttac gattacgatt 4321 acgatctaat gataatgata taatatatat attgatgaat atcgaagcta ataacgagat 4381 gaagaagaac gttggtgcat ttgttgttag atgtatgtaa tttttcccac tcgcctttgc 4441 ctaaagcaac acaaaagtaa aaaaaaagta aaaaaaccaa gaagaaaaca gaaaactaaa 4501 ccgaaatcaa taaacatgcg tatgataaat actagaaact agcggaaaag ttgcatataa 4561 aaccatagac attcattcac acatctactt actatatata tatatatatc tgtaccattt 4621 agcctatagt ccgcaagaga tcgtcgaaac aaagtcattt tactatataa atatacacaa 4681 aacacccgca taatgtaaac ttggtgtgca gagagaaaag gaaaaagaag aagaagtgag 4741 aaaaaagcga gaggagtgga gaaatcgaat ggaatttgtt gtcgcgttga tttaaatcta 4801 tataatgagt aaaatattgt atatttaaca atctatgaaa caaatatagt atgtagataa 4861 aacacacaca cacacataca cacgaacacg aacccataca agcatacatg gattaccgtt 4921 gcggtctaat tttatacaca caaacacaca agacaaatcg aattgcaaag gcaaataaat 4981 aattaaataa gaaagcgaaa aagaagaaga agcagaagcg gaaacggaag tgacgccaag 5041 aagaagaaga agcgagctgg agatgagatc aactcaaact agataactat acatatattt 5101 gctgattaat ttatatttat ataaaccaat ctacgattta tagccaacgc acagaaaaaa 5161 caaacaaaac acattcgaaa tttgttcgaa aaaatttagc aaaattcaag ttgagtgtta 5221 acattattat ccatgcgaat atgcttgaaa atattattat tttctactct gtccatcgtc 5281 tctcttgctt cccttcttac atacatactt actacttgaa acattttttt atttgtattt 5341 aatttttttt ttttatattg caaaaacgtc gcaaaaacga cgccacagca gcagcagcta 5401 tggatattat ttcaaaaata tatacatata actattgtac gaaataaaga gaatacaaat 5461 tgattataat tttcacaatg ta