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LOCUS XM_017155653 6064 bp mRNA linear INV 09-DEC-2024 variant X10, mRNA. ACCESSION XM_017155653 VERSION XM_017155653.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017155653.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6064 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..6064 /gene="dlg1" /note="discs large 1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108066907" CDS 654..3935 /gene="dlg1" /codon_start=1 /product="disks large 1 tumor suppressor protein isoform X10" /protein_id="XP_017011142.2" /db_xref="GeneID:108066907" /translation="MPVKKQEAHRALELLEDYHARLSEPQDRALRIAIERVIRIFKSR LFQALLDIQEFYELTLLDDSKSIQQKTAETLQIATKWEKDGQAVKIADNQRMRIESDT ENAKEPPAEQQQQRSSRSPQQNPQQQQPQQQQQPQQQLGSKSRSGSQTVNGDDSWLYE DIQLERGNSGLGFSIAGGTDNPHIGTDTSIYITKLISGGAAAADGRLSINDIIVSVNE VSVVDVPHASAVDALKKAGNVVKLHVKRKRDTAATTPAAGSAAGDARDGGPKVMEIDL VKGGKGLGFSIAGGIGNQHIPGDNGIYVTKLMDGGAAQVDGRLNIGDKLIAVRTNGSE KNLENVTHELAVATLKSITDKVTLIIGKTQHLTTSASGGGGGGLSSGQQLSQSQSQLA TSQSQSQVHQQQQQHQTPMVNSQSTGALNSVGHTVVDSPPSPITPQAAAATASVIASN TTVTTVTATNSSSKLPPLLIGANSNSNINSNSNSNSNSNNINNNSSSSSTTAIVATAA AATPPASFYNNNASMPALPVESNQTNNRSQSPQPRQPGSRYASTNVLAAVPPGTPRAV STEDITREPRTITIQKGPQGLGFNIVGGEDGQGIYVSFILAGGPADLGSELKRGDQLL SVNNVNLTHATHEEAAQALKTSGGVVTLLAQYRPEEYNRFEARIQELKQQAALGAGGS GTLLRTTQKRSLYVRALFDYDPNRDDGLPSRGLPFKHGDILHVTNASDDEWWQARRVL GDNEDEQIGIVPSKRRWERKMRARDRSVKFQGHAAANNNVDKQSTLDRKKKNFTFSRK FPFMKSRDEKNEDGSDQEPNGVVSSTSELDINSVNNNQANEPQPFMLCYTQDDANAEG GEIIYRVELPDMEQITLIYLENSDADYPSEENVLSYEAVQRLSINYTRPVIILGPLKD RINDDLISEYPDKFGSCVPHTTRPKREYEVDGRDYHFVSSREQMERDIQNHLFIEAGQ YNDNLYGTSVASVREVAEKGKHCILDVSGNAIKRLQVAQLYPVAVFIKPKSVDSVMEM NRRMTEEQAKKTYERAIKMEQEFGEYFTGVVQGDTIEEIYSKVKSMIWSQSGPTIWVP SKESL" misc_feature 669..845 /gene="dlg1" /note="Region: L27_1; pfam09058" /db_xref="CDD:462665" misc_feature 1128..1394 /gene="dlg1" /note="PDZ domain 1 of human discs large homolog 1 (Dlg1), Dlg2, and Dlg4, Drosophila disc large (Dlg), and related domains; Region: PDZ1_Dlg1-2-4-like; cd06723" /db_xref="CDD:467206" misc_feature order(1161..1181,1230..1232,1239..1241,1329..1331, 1341..1343,1350..1355) /gene="dlg1" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:467206" misc_feature 1470..1736 /gene="dlg1" /note="PDZ domain 2 of human discs large homolog 1 (Dlg1), Dlg2, and Dlg4, Drosophila disc large (Dlg), and related domains; Region: PDZ2_Dlg1-2-4-like; cd06724" /db_xref="CDD:467207" misc_feature order(1497..1517,1566..1568,1575..1577,1677..1679, 1689..1691,1698..1703) /gene="dlg1" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:467207" misc_feature 2373..2645 /gene="dlg1" /note="PDZ domain 3 of human discs large homolog 1 (Dlg1), Dlg2, and Dlg4, Drosophila disc large (Dlg), and related domains; Region: PDZ3_Dlg1-2-4-like; cd06795" /db_xref="CDD:467257" misc_feature order(2409..2429,2460..2462,2469..2471,2559..2561, 2571..2573,2580..2585) /gene="dlg1" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:467257" misc_feature 2736..2918 /gene="dlg1" /note="Src Homology 3 domain of Disks large homolog proteins; Region: SH3_DLG-like; cd11861" /db_xref="CDD:212795" misc_feature order(2742..2744,2808..2813) /gene="dlg1" /note="GuK domain interface [polypeptide binding]; other site" /db_xref="CDD:212795" misc_feature order(2751..2753,2757..2759,2766..2768,2793..2795, 2847..2852,2907..2909,2913..2918) /gene="dlg1" /note="peptide ligand binding site [polypeptide binding]; other site" /db_xref="CDD:212795" misc_feature 3357..3893 /gene="dlg1" /note="Guanylate kinase; Region: Guanylate_kin; pfam00625" /db_xref="CDD:395500" polyA_site 6064 /gene="dlg1" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cagaactagt gttcccgtga gcagagcaga aaaccgaacc atggtggatg gaattataga 61 ataaactaaa tgtgaacaaa aaataaattt tacaaaaaaa gaaaaaaacg atcagagttt 121 ttttttgtgt tggtgttgtg ttgtgaagaa taagaagaaa gacgaaggac atttcgatga 181 cagccgaatt tcaagtgcaa tttaaaagct atagaaccgg aagtagacga ggagccactg 241 aaatgtgaaa ttcgccaaga aatcgagaga aaacgcacac gtcaatgtaa ccacaaaact 301 gccccaaaaa ataataaaat aaaaaaaact aaaagcgcaa aattaaaaac aaatctccaa 361 cttcgttcga aagccaaaaa agcaacaaca atatttgtat ataaaatata gaatatatat 421 attttaaata tatatataca tgtgcccgca gaactaaagg acgaactaaa gccaaagcga 481 tttcgccgca tttttccact cgaaagcgac tccagtaaat tctcaaaatt gcgacccacg 541 ctttttcgag ttcggcggcg ttgaaccaca atcaaagctg ctgcaccacc gccatttccg 601 ctgccatttc caccagcacc accataaata gtagcagaaa caccgcttac agaatgccag 661 tgaaaaagca agaagctcat cgggctctcg agctgctcga ggactatcac gccaggctat 721 cggagcccca ggatcgggca ctgcgtattg caatcgaacg cgttatacgc atatttaaat 781 ctcgcttgtt tcaagcgctg ttagatatac aagaattcta tgaattgaca ttattggatg 841 actcgaagag catacagcaa aagacagcgg agaccttgca aattgcaacc aaatgggaga 901 aggacggaca ggccgttaaa atagccgata atcagcgaat gcgcatcgag tcggatacgg 961 aaaatgcgaa ggagccaccg gctgagcagc agcagcagcg cagttcccgc tccccgcagc 1021 agaatccgca acagcagcag ccgcaacagc aacagcagcc gcaacagcag ctgggatcca 1081 agtcaaggag cgggtcgcag actgtaaacg gcgatgatag ctggttgtac gaggacattc 1141 agctggagcg cggcaactcc ggattgggat tctcgattgc cggcggcacg gataatccgc 1201 acatcggcac cgacacctcc atctacatca ccaagctaat ttccggcgga gcagctgccg 1261 ccgatggacg gctgagcatc aacgacatta tcgtttcggt gaacgaggtg tccgtggtgg 1321 atgtgccgca tgcctccgcc gtggatgccc tgaaaaaggc cggcaatgtg gtcaagttgc 1381 atgtgaagcg aaaacgtgac acggcggcca ccactccggc cgcaggatcg gcggctggag 1441 atgcccgcga tggtggaccc aaggtcatgg aaatcgatct ggtcaagggc ggcaagggat 1501 tgggcttctc gattgccggc ggcattggca accagcacat ccccggcgac aatggcatct 1561 atgtgaccaa gctgatggac ggcggagcgg cgcaggtgga cggacgtctc aatatcggcg 1621 acaaactcat tgcagtgcgc accaatggga gcgaaaagaa tctggagaac gtaacgcacg 1681 aactggcggt ggccacgcta aaatcgatca ccgacaaggt gacgctgatc attgggaaga 1741 cgcagcacct gaccaccagt gcgtctggcg gcggaggagg aggcctctca tccggacagc 1801 agttgtcgca gtcgcagtcg cagttggcca ccagccagag ccaaagtcag gtgcaccagc 1861 agcagcagca gcatcagacg ccgatggtca attcgcagtc gacaggtgcg ctaaatagtg 1921 tgggacatac ggttgtcgat tctccaccat caccaataac accacaagca gcagcagcaa 1981 ctgcatcagt cattgcaagc aacacaacag tcaccacagt cacagccacc aacagtagca 2041 gcaagttgcc gcctttgcta attggcgcca acagtaatag caatatcaat agcaatagca 2101 acagcaacag caacagcaat aacatcaaca acaacagcag tagcagcagc acgacggcaa 2161 ttgttgcaac agcggcagca gcaactccac ccgcctcctt ctataacaat aatgcttcca 2221 tgcccgccct gcctgtcgaa tccaatcaaa caaacaaccg atcccaatca ccccagccgc 2281 gccagcccgg ctcgcgatat gcctccacaa atgtcctggc cgccgttccg ccaggaactc 2341 cgcgcgcagt cagcaccgag gatataacca gagaaccgcg caccatcacc atacagaagg 2401 gaccccaggg cctgggcttc aatatcgttg gcggcgagga tggccagggc atctatgtgt 2461 ccttcatcct ggccggcggt ccagccgatc tcggatcgga gctgaagcgc ggcgaccagc 2521 tgctcagcgt gaacaatgtc aatctcacgc atgccaccca cgaggaggcg gcccaggcgc 2581 tcaagacttc tggcggcgtg gtgaccctgc tggcgcagta ccgacccgag gagtacaacc 2641 gcttcgaggc gcgcatccag gagctgaaac agcaggctgc cctcggcgcc ggcggatcgg 2701 gaaccctgct gcgcaccacg cagaagcgat cgctctatgt gcgcgccctg ttcgactacg 2761 atcccaatcg ggacgacggc ctgccctcgc ggggattgcc cttcaagcac ggcgacatcc 2821 tgcacgtgac caatgcctcc gacgacgaat ggtggcaggc gcgacgcgtt ctcggcgaca 2881 acgaggacga gcagatcggc attgtgccgt cgaagaggcg ctgggagcgc aagatgcggg 2941 ctcgggatcg cagcgtcaag ttccagggcc atgcggcagc caataataat gtggataagc 3001 aatcgacatt ggatcgaaag aaaaagaatt tcacattctc gcgcaaattt ccgtttatga 3061 agagtcgcga tgagaagaat gaagatggca gcgaccaaga gcccaatgga gttgtgagca 3121 gcaccagcga actcgacatc aatagtgtca acaacaatca ggcgaatgaa ccgcaaccct 3181 ttatgctttg ctacacacaa gacgatgcca atgctgaagg aggcgagatt atctacaggg 3241 tggagttacc cgatatggag cagataactc tgatctactt ggagaatagt gatgcggact 3301 atccttccga ggagaacgtc ctgtcctacg aggccgtgca gcgcctgtcc atcaactaca 3361 cgcgccctgt gattattctg gggccgctga aggatcgcat caacgatgac ctaatatcgg 3421 agtatcccga caagtttgga tcctgtgtgc cacacaccac ccgacccaag cgggagtacg 3481 aggtggacgg cagggactat cactttgtgt cctcgcgcga gcaaatggag cgggacatcc 3541 agaaccatct gttcatcgag gcgggccaat ataacgacaa tctgtacggc acatcggtgg 3601 ccagtgtgcg cgaggtggcg gagaagggca agcactgcat cctggacgtg tccgggaatg 3661 ccataaagcg cctccaggtg gcccagctct atcccgttgc agtgttcatc aagcccaagt 3721 cggtggattc ggtgatggag atgaatcgtc gcatgacgga ggagcaggcc aagaagacgt 3781 acgagcgggc gattaaaatg gagcaggaat tcggcgaata ctttaccggc gttgtccagg 3841 gcgacaccat cgaggagatc tacagcaaag tgaagtcgat gatttggtcc cagtcgggac 3901 caaccatttg ggtaccttcc aaggaatctc tatgaccaac agccaccaca acttggacac 3961 tgccgcctcg agttcgatgc cgaccggtct cgagaacaac aataggagca acggcggcag 4021 cagcaacaaa tcagcagccg cactgatgat gcatcacagt agcaacaaca gaagcagcaa 4081 cagcaacaac aactactaca acagcagaag cagccacagc aacagcaaca acaacaacta 4141 cagtactact gacaacgaca ggaaacggaa acagaaacta gaaaaccaga aaacagaacc 4201 actgactact tagaaactta accgacagac agtaaaattt atattgacgc agccgcagca 4261 gccaacttaa tgtagcaaat tgtccaaagc aattttattt ggatgcactc attgatgtac 4321 ggtcaggtga acgtacatcc cagcagctag acgaggatgg gcgaacatca gagcaaagca 4381 tttggcattt ggcaacgtag ggaagatgag atgatgagat gggtgttcaa actgaagcgg 4441 acaaaggtgt atagttttta gttagaacaa agttggatat aaacaaaaaa aaaagataaa 4501 gaagcgaaat atataatata tatacacacc acttatatag actaagatcc gattatataa 4561 aagcatagag atgatcagac gaggagacga gggctttagg gagttcgtta agcgctagag 4621 tgttgtttgt ttatgttgat gtttatatac gagagccaag agttatagcg agttagttat 4681 gttgacgata atgtgttttt tgatatatat tgatctatat gaaatatgta ttgcctggtg 4741 gttaacttta agtacgacaa tgtttagtag ctgactacga ataatgacga cgataatgac 4801 gggacgcaga tgcggaggcg gatgcgaatg cggatgcggt tacggttgcg gatctagcgg 4861 aaagtcagat aatgacgaga ataacgattt acgattacga ttacgatcta atgataatga 4921 tataatatat atattgatga atatcgaagc taataacgag atgaagaaga acgttggtgc 4981 atttgttgtt agatgtatgt aatttttccc actcgccttt gcctaaagca acacaaaagt 5041 aaaaaaaaag taaaaaaacc aagaagaaaa cagaaaacta aaccgaaatc aataaacatg 5101 cgtatgataa atactagaaa ctagcggaaa agttgcatat aaaaccatag acattcattc 5161 acacatctac ttactatata tatatatata tctgtaccat ttagcctata gtccgcaaga 5221 gatcgtcgaa acaaagtcat tttactatat aaatatacac aaaacacccg cataatgtaa 5281 acttggtgtg cagagagaaa aggaaaaaga agaagaagtg agaaaaaagc gagaggagtg 5341 gagaaatcga atggaatttg ttgtcgcgtt gatttaaatc tatataatga gtaaaatatt 5401 gtatatttaa caatctatga aacaaatata gtatgtagat aaaacacaca cacacacata 5461 cacacgaaca cgaacccata caagcataca tggattaccg ttgcggtcta attttataca 5521 cacaaacaca caagacaaat cgaattgcaa aggcaaataa ataattaaat aagaaagcga 5581 aaaagaagaa gaagcagaag cggaaacgga agtgacgcca agaagaagaa gaagcgagct 5641 ggagatgaga tcaactcaaa ctagataact atacatatat ttgctgatta atttatattt 5701 atataaacca atctacgatt tatagccaac gcacagaaaa aacaaacaaa acacattcga 5761 aatttgttcg aaaaaattta gcaaaattca agttgagtgt taacattatt atccatgcga 5821 atatgcttga aaatattatt attttctact ctgtccatcg tctctcttgc ttcccttctt 5881 acatacatac ttactacttg aaacattttt ttatttgtat ttaatttttt ttttttatat 5941 tgcaaaaacg tcgcaaaaac gacgccacag cagcagcagc tatggatatt atttcaaaaa 6001 tatatacata taactattgt acgaaataaa gagaatacaa attgattata attttcacaa 6061 tgta