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LOCUS XM_017155652 6247 bp mRNA linear INV 09-DEC-2024 variant X9, mRNA. ACCESSION XM_017155652 VERSION XM_017155652.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017155652.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6247 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..6247 /gene="dlg1" /note="discs large 1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108066907" CDS 654..4118 /gene="dlg1" /codon_start=1 /product="disks large 1 tumor suppressor protein isoform X9" /protein_id="XP_017011141.2" /db_xref="GeneID:108066907" /translation="MPVKKQEAHRALELLEDYHARLSEPQDRALRIAIERVIRIFKSR LFQALLDIQEFYELTLLDDSKSIQQKTAETLQIATKWEKDGQAVKIADFIKTSNLNRN CAYEFNNDASSNQTNQSANQLNQNQIANNVSAQAQAEALSRTFKSELEEILNQRMRIE SDTENAKEPPAEQQQQRSSRSPQQNPQQQQPQQQQQPQQQLGSKSRSGSQTVNGDDSW LYEDIQLERGNSGLGFSIAGGTDNPHIGTDTSIYITKLISGGAAAADGRLSINDIIVS VNEVSVVDVPHASAVDALKKAGNVVKLHVKRKRDTAATTPAAGSAAGDARDGGPKVME IDLVKGGKGLGFSIAGGIGNQHIPGDNGIYVTKLMDGGAAQVDGRLNIGDKLIAVRTN GSEKNLENVTHELAVATLKSITDKVTLIIGKTQHLTTSASGGGGGGLSSGQQLSQSQS QLATSQSQSQVHQQQQQHQTPMVNSQSTGALNSVGHTVVDSPPSPITPQAAAATASVI ASNTTVTTVTATNSSSKLPPLLIGANSNSNINSNSNSNSNSNNINNNSSSSSTTAIVA TAAAATPPASFYNNNASMPALPVESNQTNNRSQSPQPRQPGSRYASTNVLAAVPPGTP RAVSTEDITREPRTITIQKGPQGLGFNIVGGEDGQGIYVSFILAGGPADLGSELKRGD QLLSVNNVNLTHATHEEAAQALKTSGGVVTLLAQYRPEEYNRFEARIQELKQQAALGA GGSGTLLRTTQKRSLYVRALFDYDPNRDDGLPSRGLPFKHGDILHVTNASDDEWWQAR RVLGDNEDEQIGIVPSKRRWERKMRARDRSVKFQGHAAANNNVDKQSTLDRKKKNFTF SRKFPFMKSRDEKNEDGSDQEPNGVVSSTSELDINSVNNNQANEPQPFMLCYTQDDAN AEGGEIIYRVELPDMEQITLIYLENSDADYPSEENVLSYEAVQRLSINYTRPVIILGP LKDRINDDLISEYPDKFGSCVPHTTRPKREYEVDGRDYHFVSSREQMERDIQNHLFIE AGQYNDNLYGTSVASVREVAEKGKHCILDVSGNAIKRLQVAQLYPVAVFIKPKSVDSV MEMNRRMTEEQAKKTYERAIKMEQEFGEYFTGVVQGDTIEEIYSKVKSMIWSQSGPTI WVPSKESL" misc_feature 669..845 /gene="dlg1" /note="Region: L27_1; pfam09058" /db_xref="CDD:462665" misc_feature 1311..1577 /gene="dlg1" /note="PDZ domain 1 of human discs large homolog 1 (Dlg1), Dlg2, and Dlg4, Drosophila disc large (Dlg), and related domains; Region: PDZ1_Dlg1-2-4-like; cd06723" /db_xref="CDD:467206" misc_feature order(1344..1364,1413..1415,1422..1424,1512..1514, 1524..1526,1533..1538) /gene="dlg1" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:467206" misc_feature 1653..1919 /gene="dlg1" /note="PDZ domain 2 of human discs large homolog 1 (Dlg1), Dlg2, and Dlg4, Drosophila disc large (Dlg), and related domains; Region: PDZ2_Dlg1-2-4-like; cd06724" /db_xref="CDD:467207" misc_feature order(1680..1700,1749..1751,1758..1760,1860..1862, 1872..1874,1881..1886) /gene="dlg1" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:467207" misc_feature 2556..2828 /gene="dlg1" /note="PDZ domain 3 of human discs large homolog 1 (Dlg1), Dlg2, and Dlg4, Drosophila disc large (Dlg), and related domains; Region: PDZ3_Dlg1-2-4-like; cd06795" /db_xref="CDD:467257" misc_feature order(2592..2612,2643..2645,2652..2654,2742..2744, 2754..2756,2763..2768) /gene="dlg1" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:467257" misc_feature 2919..3101 /gene="dlg1" /note="Src Homology 3 domain of Disks large homolog proteins; Region: SH3_DLG-like; cd11861" /db_xref="CDD:212795" misc_feature order(2925..2927,2991..2996) /gene="dlg1" /note="GuK domain interface [polypeptide binding]; other site" /db_xref="CDD:212795" misc_feature order(2934..2936,2940..2942,2949..2951,2976..2978, 3030..3035,3090..3092,3096..3101) /gene="dlg1" /note="peptide ligand binding site [polypeptide binding]; other site" /db_xref="CDD:212795" misc_feature 3540..4076 /gene="dlg1" /note="Guanylate kinase; Region: Guanylate_kin; pfam00625" /db_xref="CDD:395500" polyA_site 6247 /gene="dlg1" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cagaactagt gttcccgtga gcagagcaga aaaccgaacc atggtggatg gaattataga 61 ataaactaaa tgtgaacaaa aaataaattt tacaaaaaaa gaaaaaaacg atcagagttt 121 ttttttgtgt tggtgttgtg ttgtgaagaa taagaagaaa gacgaaggac atttcgatga 181 cagccgaatt tcaagtgcaa tttaaaagct atagaaccgg aagtagacga ggagccactg 241 aaatgtgaaa ttcgccaaga aatcgagaga aaacgcacac gtcaatgtaa ccacaaaact 301 gccccaaaaa ataataaaat aaaaaaaact aaaagcgcaa aattaaaaac aaatctccaa 361 cttcgttcga aagccaaaaa agcaacaaca atatttgtat ataaaatata gaatatatat 421 attttaaata tatatataca tgtgcccgca gaactaaagg acgaactaaa gccaaagcga 481 tttcgccgca tttttccact cgaaagcgac tccagtaaat tctcaaaatt gcgacccacg 541 ctttttcgag ttcggcggcg ttgaaccaca atcaaagctg ctgcaccacc gccatttccg 601 ctgccatttc caccagcacc accataaata gtagcagaaa caccgcttac agaatgccag 661 tgaaaaagca agaagctcat cgggctctcg agctgctcga ggactatcac gccaggctat 721 cggagcccca ggatcgggca ctgcgtattg caatcgaacg cgttatacgc atatttaaat 781 ctcgcttgtt tcaagcgctg ttagatatac aagaattcta tgaattgaca ttattggatg 841 actcgaagag catacagcaa aagacagcgg agaccttgca aattgcaacc aaatgggaga 901 aggacggaca ggccgttaaa atagccgatt ttatcaaaac ttcaaattta aatcgcaatt 961 gcgcctatga gtttaacaac gacgcctcat ccaatcaaac caaccaatca gccaatcaac 1021 tcaatcagaa tcagatcgcg aataatgtca gcgctcaggc gcaggccgaa gccctcagca 1081 gaacatttaa gagtgaattg gaagagatct tgaatcagcg aatgcgcatc gagtcggata 1141 cggaaaatgc gaaggagcca ccggctgagc agcagcagca gcgcagttcc cgctccccgc 1201 agcagaatcc gcaacagcag cagccgcaac agcaacagca gccgcaacag cagctgggat 1261 ccaagtcaag gagcgggtcg cagactgtaa acggcgatga tagctggttg tacgaggaca 1321 ttcagctgga gcgcggcaac tccggattgg gattctcgat tgccggcggc acggataatc 1381 cgcacatcgg caccgacacc tccatctaca tcaccaagct aatttccggc ggagcagctg 1441 ccgccgatgg acggctgagc atcaacgaca ttatcgtttc ggtgaacgag gtgtccgtgg 1501 tggatgtgcc gcatgcctcc gccgtggatg ccctgaaaaa ggccggcaat gtggtcaagt 1561 tgcatgtgaa gcgaaaacgt gacacggcgg ccaccactcc ggccgcagga tcggcggctg 1621 gagatgcccg cgatggtgga cccaaggtca tggaaatcga tctggtcaag ggcggcaagg 1681 gattgggctt ctcgattgcc ggcggcattg gcaaccagca catccccggc gacaatggca 1741 tctatgtgac caagctgatg gacggcggag cggcgcaggt ggacggacgt ctcaatatcg 1801 gcgacaaact cattgcagtg cgcaccaatg ggagcgaaaa gaatctggag aacgtaacgc 1861 acgaactggc ggtggccacg ctaaaatcga tcaccgacaa ggtgacgctg atcattggga 1921 agacgcagca cctgaccacc agtgcgtctg gcggcggagg aggaggcctc tcatccggac 1981 agcagttgtc gcagtcgcag tcgcagttgg ccaccagcca gagccaaagt caggtgcacc 2041 agcagcagca gcagcatcag acgccgatgg tcaattcgca gtcgacaggt gcgctaaata 2101 gtgtgggaca tacggttgtc gattctccac catcaccaat aacaccacaa gcagcagcag 2161 caactgcatc agtcattgca agcaacacaa cagtcaccac agtcacagcc accaacagta 2221 gcagcaagtt gccgcctttg ctaattggcg ccaacagtaa tagcaatatc aatagcaata 2281 gcaacagcaa cagcaacagc aataacatca acaacaacag cagtagcagc agcacgacgg 2341 caattgttgc aacagcggca gcagcaactc cacccgcctc cttctataac aataatgctt 2401 ccatgcccgc cctgcctgtc gaatccaatc aaacaaacaa ccgatcccaa tcaccccagc 2461 cgcgccagcc cggctcgcga tatgcctcca caaatgtcct ggccgccgtt ccgccaggaa 2521 ctccgcgcgc agtcagcacc gaggatataa ccagagaacc gcgcaccatc accatacaga 2581 agggacccca gggcctgggc ttcaatatcg ttggcggcga ggatggccag ggcatctatg 2641 tgtccttcat cctggccggc ggtccagccg atctcggatc ggagctgaag cgcggcgacc 2701 agctgctcag cgtgaacaat gtcaatctca cgcatgccac ccacgaggag gcggcccagg 2761 cgctcaagac ttctggcggc gtggtgaccc tgctggcgca gtaccgaccc gaggagtaca 2821 accgcttcga ggcgcgcatc caggagctga aacagcaggc tgccctcggc gccggcggat 2881 cgggaaccct gctgcgcacc acgcagaagc gatcgctcta tgtgcgcgcc ctgttcgact 2941 acgatcccaa tcgggacgac ggcctgccct cgcggggatt gcccttcaag cacggcgaca 3001 tcctgcacgt gaccaatgcc tccgacgacg aatggtggca ggcgcgacgc gttctcggcg 3061 acaacgagga cgagcagatc ggcattgtgc cgtcgaagag gcgctgggag cgcaagatgc 3121 gggctcggga tcgcagcgtc aagttccagg gccatgcggc agccaataat aatgtggata 3181 agcaatcgac attggatcga aagaaaaaga atttcacatt ctcgcgcaaa tttccgttta 3241 tgaagagtcg cgatgagaag aatgaagatg gcagcgacca agagcccaat ggagttgtga 3301 gcagcaccag cgaactcgac atcaatagtg tcaacaacaa tcaggcgaat gaaccgcaac 3361 cctttatgct ttgctacaca caagacgatg ccaatgctga aggaggcgag attatctaca 3421 gggtggagtt acccgatatg gagcagataa ctctgatcta cttggagaat agtgatgcgg 3481 actatccttc cgaggagaac gtcctgtcct acgaggccgt gcagcgcctg tccatcaact 3541 acacgcgccc tgtgattatt ctggggccgc tgaaggatcg catcaacgat gacctaatat 3601 cggagtatcc cgacaagttt ggatcctgtg tgccacacac cacccgaccc aagcgggagt 3661 acgaggtgga cggcagggac tatcactttg tgtcctcgcg cgagcaaatg gagcgggaca 3721 tccagaacca tctgttcatc gaggcgggcc aatataacga caatctgtac ggcacatcgg 3781 tggccagtgt gcgcgaggtg gcggagaagg gcaagcactg catcctggac gtgtccggga 3841 atgccataaa gcgcctccag gtggcccagc tctatcccgt tgcagtgttc atcaagccca 3901 agtcggtgga ttcggtgatg gagatgaatc gtcgcatgac ggaggagcag gccaagaaga 3961 cgtacgagcg ggcgattaaa atggagcagg aattcggcga atactttacc ggcgttgtcc 4021 agggcgacac catcgaggag atctacagca aagtgaagtc gatgatttgg tcccagtcgg 4081 gaccaaccat ttgggtacct tccaaggaat ctctatgacc aacagccacc acaacttgga 4141 cactgccgcc tcgagttcga tgccgaccgg tctcgagaac aacaatagga gcaacggcgg 4201 cagcagcaac aaatcagcag ccgcactgat gatgcatcac agtagcaaca acagaagcag 4261 caacagcaac aacaactact acaacagcag aagcagccac agcaacagca acaacaacaa 4321 ctacagtact actgacaacg acaggaaacg gaaacagaaa ctagaaaacc agaaaacaga 4381 accactgact acttagaaac ttaaccgaca gacagtaaaa tttatattga cgcagccgca 4441 gcagccaact taatgtagca aattgtccaa agcaatttta tttggatgca ctcattgatg 4501 tacggtcagg tgaacgtaca tcccagcagc tagacgagga tgggcgaaca tcagagcaaa 4561 gcatttggca tttggcaacg tagggaagat gagatgatga gatgggtgtt caaactgaag 4621 cggacaaagg tgtatagttt ttagttagaa caaagttgga tataaacaaa aaaaaaagat 4681 aaagaagcga aatatataat atatatacac accacttata tagactaaga tccgattata 4741 taaaagcata gagatgatca gacgaggaga cgagggcttt agggagttcg ttaagcgcta 4801 gagtgttgtt tgtttatgtt gatgtttata tacgagagcc aagagttata gcgagttagt 4861 tatgttgacg ataatgtgtt ttttgatata tattgatcta tatgaaatat gtattgcctg 4921 gtggttaact ttaagtacga caatgtttag tagctgacta cgaataatga cgacgataat 4981 gacgggacgc agatgcggag gcggatgcga atgcggatgc ggttacggtt gcggatctag 5041 cggaaagtca gataatgacg agaataacga tttacgatta cgattacgat ctaatgataa 5101 tgatataata tatatattga tgaatatcga agctaataac gagatgaaga agaacgttgg 5161 tgcatttgtt gttagatgta tgtaattttt cccactcgcc tttgcctaaa gcaacacaaa 5221 agtaaaaaaa aagtaaaaaa accaagaaga aaacagaaaa ctaaaccgaa atcaataaac 5281 atgcgtatga taaatactag aaactagcgg aaaagttgca tataaaacca tagacattca 5341 ttcacacatc tacttactat atatatatat atatctgtac catttagcct atagtccgca 5401 agagatcgtc gaaacaaagt cattttacta tataaatata cacaaaacac ccgcataatg 5461 taaacttggt gtgcagagag aaaaggaaaa agaagaagaa gtgagaaaaa agcgagagga 5521 gtggagaaat cgaatggaat ttgttgtcgc gttgatttaa atctatataa tgagtaaaat 5581 attgtatatt taacaatcta tgaaacaaat atagtatgta gataaaacac acacacacac 5641 atacacacga acacgaaccc atacaagcat acatggatta ccgttgcggt ctaattttat 5701 acacacaaac acacaagaca aatcgaattg caaaggcaaa taaataatta aataagaaag 5761 cgaaaaagaa gaagaagcag aagcggaaac ggaagtgacg ccaagaagaa gaagaagcga 5821 gctggagatg agatcaactc aaactagata actatacata tatttgctga ttaatttata 5881 tttatataaa ccaatctacg atttatagcc aacgcacaga aaaaacaaac aaaacacatt 5941 cgaaatttgt tcgaaaaaat ttagcaaaat tcaagttgag tgttaacatt attatccatg 6001 cgaatatgct tgaaaatatt attattttct actctgtcca tcgtctctct tgcttccctt 6061 cttacataca tacttactac ttgaaacatt tttttatttg tatttaattt ttttttttta 6121 tattgcaaaa acgtcgcaaa aacgacgcca cagcagcagc agctatggat attatttcaa 6181 aaatatatac atataactat tgtacgaaat aaagagaata caaattgatt ataattttca 6241 caatgta