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LOCUS XM_017155651 5982 bp mRNA linear INV 09-DEC-2024 variant X8, mRNA. ACCESSION XM_017155651 VERSION XM_017155651.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017155651.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5982 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..5982 /gene="dlg1" /note="discs large 1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108066907" CDS 35..3853 /gene="dlg1" /codon_start=1 /product="disks large 1 tumor suppressor protein isoform X8" /protein_id="XP_017011140.2" /db_xref="GeneID:108066907" /translation="MDSDTDDSEREKSSDPNEGLLSSDDKTFHDDDEEEDSSPADDEE EPEGEESLLPQQQKKAQPLVVLVESGSGEAIEEPTEEIEIDRVTLPIKEEREPDPEPE PSPLKHDSVRESVECFYSAQDLLEYGHMLSSSGGSIVRTPDVESGYFEKSESDEGGPP SSSSSLGAARCRLLSGISGLSPVSSSSSRHSAEGLRMELSRFRTMIETLERESLEKTK GKPKPRQRSQLQVESAGESGSDQGSEREMERGFWSTVFGQAGLEISQDEDERIADIKK AHRALELLEDYHARLSEPQDRALRIAIERVIRIFKSRLFQALLDIQEFYELTLLDDSK SIQQKTAETLQIATKWEKDGQAVKIADFIKTSNLNRNCAYEFNNDASSNQTNQSANQL NQNQIANNVSAQAQAEALSRTFKSELEEILNQRMRIESDTENAKEPPAEQQQQRSSRS PQQNPQQQQPQQQQQPQQQLGSKSRSGSQTVNGDDSWLYEDIQLERGNSGLGFSIAGG TDNPHIGTDTSIYITKLISGGAAAADGRLSINDIIVSVNEVSVVDVPHASAVDALKKA GNVVKLHVKRKRDTAATTPAAGSAAGDARDGGPKVMEIDLVKGGKGLGFSIAGGIGNQ HIPGDNGIYVTKLMDGGAAQVDGRLNIGDKLIAVRTNGSEKNLENVTHELAVATLKSI TDKVTLIIGKTQHLTTSASGGGGGGLSSGQQLSQSQSQLATSQSQSQVHQQQQQHQTP MVNSQSTEPGSRYASTNVLAAVPPGTPRAVSTEDITREPRTITIQKGPQGLGFNIVGG EDGQGIYVSFILAGGPADLGSELKRGDQLLSVNNVNLTHATHEEAAQALKTSGGVVTL LAQYRPEEYNRFEARIQELKQQAALGAGGSGTLLRTTQKRSLYVRALFDYDPNRDDGL PSRGLPFKHGDILHVTNASDDEWWQARRVLGDNEDEQIGIVPSKRRWERKMRARDRSV KFQGHAAANNNVDKQSTLDRKKKNFTFSRKFPFMKSRDEKNEDGSDQEPFMLCYTQDD ANAEGGEIIYRVELPDMEQITLIYLENSDADYPSEENVLSYEAVQRLSINYTRPVIIL GPLKDRINDDLISEYPDKFGSCVPHTTRPKREYEVDGRDYHFVSSREQMERDIQNHLF IEAGQYNDNLYGTSVASVREVAEKGKHCILDVSGNAIKRLQVAQLYPVAVFIKPKSVD SVMEMNRRMTEEQAKKTYERAIKMEQEFGEYFTGVVQGDTIEEIYSKVKSMIWSQSGP TIWVPSKESL" misc_feature 863..1033 /gene="dlg1" /note="Region: L27_1; pfam09058" /db_xref="CDD:462665" misc_feature 1499..1765 /gene="dlg1" /note="PDZ domain 1 of human discs large homolog 1 (Dlg1), Dlg2, and Dlg4, Drosophila disc large (Dlg), and related domains; Region: PDZ1_Dlg1-2-4-like; cd06723" /db_xref="CDD:467206" misc_feature order(1532..1552,1601..1603,1610..1612,1700..1702, 1712..1714,1721..1726) /gene="dlg1" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:467206" misc_feature 1841..2107 /gene="dlg1" /note="PDZ domain 2 of human discs large homolog 1 (Dlg1), Dlg2, and Dlg4, Drosophila disc large (Dlg), and related domains; Region: PDZ2_Dlg1-2-4-like; cd06724" /db_xref="CDD:467207" misc_feature order(1868..1888,1937..1939,1946..1948,2048..2050, 2060..2062,2069..2074) /gene="dlg1" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:467207" misc_feature 2366..2638 /gene="dlg1" /note="PDZ domain 3 of human discs large homolog 1 (Dlg1), Dlg2, and Dlg4, Drosophila disc large (Dlg), and related domains; Region: PDZ3_Dlg1-2-4-like; cd06795" /db_xref="CDD:467257" misc_feature order(2402..2422,2453..2455,2462..2464,2552..2554, 2564..2566,2573..2578) /gene="dlg1" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:467257" misc_feature 2729..2911 /gene="dlg1" /note="Src Homology 3 domain of Disks large homolog proteins; Region: SH3_DLG-like; cd11861" /db_xref="CDD:212795" misc_feature order(2735..2737,2801..2806) /gene="dlg1" /note="GuK domain interface [polypeptide binding]; other site" /db_xref="CDD:212795" misc_feature order(2744..2746,2750..2752,2759..2761,2786..2788, 2840..2845,2900..2902,2906..2911) /gene="dlg1" /note="peptide ligand binding site [polypeptide binding]; other site" /db_xref="CDD:212795" misc_feature 3275..3811 /gene="dlg1" /note="Guanylate kinase; Region: Guanylate_kin; pfam00625" /db_xref="CDD:395500" polyA_site 5982 /gene="dlg1" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 agcgacggga cttgtagact tggggaccac aaaaatggat tcagacacgg atgattcgga 61 acgggagaag agcagcgatc ccaacgaggg tctgctgagc agcgatgata agacctttca 121 cgatgacgac gaggaggagg actcttcccc agccgacgat gaggaggagc ccgagggtga 181 ggagtccttg ctgccgcagc agcagaagaa agctcagcca ttggtggttc tggttgagtc 241 tggttcgggg gaagccatag aagaacctac tgaagaaatc gaaatcgatc gggtgacatt 301 acccattaaa gaagaaaggg aacccgatcc ggaacccgaa ccctcacccc tcaaacacga 361 cagtgtccgc gagtccgttg aatgcttcta ttccgcccag gatctcctgg aatatggcca 421 tatgctgtcc tcctccggag gctccatagt tcgaacgccg gacgtggagt cggggtattt 481 cgagaagtcc gagagcgatg agggtggacc tccttcgtcc tcctcctcgc tgggcgccgc 541 ccgctgtcgt ctgttgtccg gcatttcggg actctcgccc gtctcctcct cgtcgagccg 601 acacagtgcc gagggtctgc gaatggaact gagtcgtttc cgcaccatga tcgaaaccct 661 cgagcgggag agtctcgaga agaccaaggg caagccgaag cccaggcaga gatcccaatt 721 gcaggtggaa tcggcggggg aaagtggttc ggatcagggt tccgaaaggg agatggaaag 781 gggcttctgg tccacggtct tcggacaggc gggtctggag atcagtcagg atgaagacga 841 gcggattgcg gatattaaaa aagctcatcg ggctctcgag ctgctcgagg actatcacgc 901 caggctatcg gagccccagg atcgggcact gcgtattgca atcgaacgcg ttatacgcat 961 atttaaatct cgcttgtttc aagcgctgtt agatatacaa gaattctatg aattgacatt 1021 attggatgac tcgaagagca tacagcaaaa gacagcggag accttgcaaa ttgcaaccaa 1081 atgggagaag gacggacagg ccgttaaaat agccgatttt atcaaaactt caaatttaaa 1141 tcgcaattgc gcctatgagt ttaacaacga cgcctcatcc aatcaaacca accaatcagc 1201 caatcaactc aatcagaatc agatcgcgaa taatgtcagc gctcaggcgc aggccgaagc 1261 cctcagcaga acatttaaga gtgaattgga agagatcttg aatcagcgaa tgcgcatcga 1321 gtcggatacg gaaaatgcga aggagccacc ggctgagcag cagcagcagc gcagttcccg 1381 ctccccgcag cagaatccgc aacagcagca gccgcaacag caacagcagc cgcaacagca 1441 gctgggatcc aagtcaagga gcgggtcgca gactgtaaac ggcgatgata gctggttgta 1501 cgaggacatt cagctggagc gcggcaactc cggattggga ttctcgattg ccggcggcac 1561 ggataatccg cacatcggca ccgacacctc catctacatc accaagctaa tttccggcgg 1621 agcagctgcc gccgatggac ggctgagcat caacgacatt atcgtttcgg tgaacgaggt 1681 gtccgtggtg gatgtgccgc atgcctccgc cgtggatgcc ctgaaaaagg ccggcaatgt 1741 ggtcaagttg catgtgaagc gaaaacgtga cacggcggcc accactccgg ccgcaggatc 1801 ggcggctgga gatgcccgcg atggtggacc caaggtcatg gaaatcgatc tggtcaaggg 1861 cggcaaggga ttgggcttct cgattgccgg cggcattggc aaccagcaca tccccggcga 1921 caatggcatc tatgtgacca agctgatgga cggcggagcg gcgcaggtgg acggacgtct 1981 caatatcggc gacaaactca ttgcagtgcg caccaatggg agcgaaaaga atctggagaa 2041 cgtaacgcac gaactggcgg tggccacgct aaaatcgatc accgacaagg tgacgctgat 2101 cattgggaag acgcagcacc tgaccaccag tgcgtctggc ggcggaggag gaggcctctc 2161 atccggacag cagttgtcgc agtcgcagtc gcagttggcc accagccaga gccaaagtca 2221 ggtgcaccag cagcagcagc agcatcagac gccgatggtc aattcgcagt cgacagagcc 2281 cggctcgcga tatgcctcca caaatgtcct ggccgccgtt ccgccaggaa ctccgcgcgc 2341 agtcagcacc gaggatataa ccagagaacc gcgcaccatc accatacaga agggacccca 2401 gggcctgggc ttcaatatcg ttggcggcga ggatggccag ggcatctatg tgtccttcat 2461 cctggccggc ggtccagccg atctcggatc ggagctgaag cgcggcgacc agctgctcag 2521 cgtgaacaat gtcaatctca cgcatgccac ccacgaggag gcggcccagg cgctcaagac 2581 ttctggcggc gtggtgaccc tgctggcgca gtaccgaccc gaggagtaca accgcttcga 2641 ggcgcgcatc caggagctga aacagcaggc tgccctcggc gccggcggat cgggaaccct 2701 gctgcgcacc acgcagaagc gatcgctcta tgtgcgcgcc ctgttcgact acgatcccaa 2761 tcgggacgac ggcctgccct cgcggggatt gcccttcaag cacggcgaca tcctgcacgt 2821 gaccaatgcc tccgacgacg aatggtggca ggcgcgacgc gttctcggcg acaacgagga 2881 cgagcagatc ggcattgtgc cgtcgaagag gcgctgggag cgcaagatgc gggctcggga 2941 tcgcagcgtc aagttccagg gccatgcggc agccaataat aatgtggata agcaatcgac 3001 attggatcga aagaaaaaga atttcacatt ctcgcgcaaa tttccgttta tgaagagtcg 3061 cgatgagaag aatgaagatg gcagcgacca agagcccttt atgctttgct acacacaaga 3121 cgatgccaat gctgaaggag gcgagattat ctacagggtg gagttacccg atatggagca 3181 gataactctg atctacttgg agaatagtga tgcggactat ccttccgagg agaacgtcct 3241 gtcctacgag gccgtgcagc gcctgtccat caactacacg cgccctgtga ttattctggg 3301 gccgctgaag gatcgcatca acgatgacct aatatcggag tatcccgaca agtttggatc 3361 ctgtgtgcca cacaccaccc gacccaagcg ggagtacgag gtggacggca gggactatca 3421 ctttgtgtcc tcgcgcgagc aaatggagcg ggacatccag aaccatctgt tcatcgaggc 3481 gggccaatat aacgacaatc tgtacggcac atcggtggcc agtgtgcgcg aggtggcgga 3541 gaagggcaag cactgcatcc tggacgtgtc cgggaatgcc ataaagcgcc tccaggtggc 3601 ccagctctat cccgttgcag tgttcatcaa gcccaagtcg gtggattcgg tgatggagat 3661 gaatcgtcgc atgacggagg agcaggccaa gaagacgtac gagcgggcga ttaaaatgga 3721 gcaggaattc ggcgaatact ttaccggcgt tgtccagggc gacaccatcg aggagatcta 3781 cagcaaagtg aagtcgatga tttggtccca gtcgggacca accatttggg taccttccaa 3841 ggaatctcta tgaccaacag ccaccacaac ttggacactg ccgcctcgag ttcgatgccg 3901 accggtctcg agaacaacaa taggagcaac ggcggcagca gcaacaaatc agcagccgca 3961 ctgatgatgc atcacagtag caacaacaga agcagcaaca gcaacaacaa ctactacaac 4021 agcagaagca gccacagcaa cagcaacaac aacaactaca gtactactga caacgacagg 4081 aaacggaaac agaaactaga aaaccagaaa acagaaccac tgactactta gaaacttaac 4141 cgacagacag taaaatttat attgacgcag ccgcagcagc caacttaatg tagcaaattg 4201 tccaaagcaa ttttatttgg atgcactcat tgatgtacgg tcaggtgaac gtacatccca 4261 gcagctagac gaggatgggc gaacatcaga gcaaagcatt tggcatttgg caacgtaggg 4321 aagatgagat gatgagatgg gtgttcaaac tgaagcggac aaaggtgtat agtttttagt 4381 tagaacaaag ttggatataa acaaaaaaaa aagataaaga agcgaaatat ataatatata 4441 tacacaccac ttatatagac taagatccga ttatataaaa gcatagagat gatcagacga 4501 ggagacgagg gctttaggga gttcgttaag cgctagagtg ttgtttgttt atgttgatgt 4561 ttatatacga gagccaagag ttatagcgag ttagttatgt tgacgataat gtgttttttg 4621 atatatattg atctatatga aatatgtatt gcctggtggt taactttaag tacgacaatg 4681 tttagtagct gactacgaat aatgacgacg ataatgacgg gacgcagatg cggaggcgga 4741 tgcgaatgcg gatgcggtta cggttgcgga tctagcggaa agtcagataa tgacgagaat 4801 aacgatttac gattacgatt acgatctaat gataatgata taatatatat attgatgaat 4861 atcgaagcta ataacgagat gaagaagaac gttggtgcat ttgttgttag atgtatgtaa 4921 tttttcccac tcgcctttgc ctaaagcaac acaaaagtaa aaaaaaagta aaaaaaccaa 4981 gaagaaaaca gaaaactaaa ccgaaatcaa taaacatgcg tatgataaat actagaaact 5041 agcggaaaag ttgcatataa aaccatagac attcattcac acatctactt actatatata 5101 tatatatatc tgtaccattt agcctatagt ccgcaagaga tcgtcgaaac aaagtcattt 5161 tactatataa atatacacaa aacacccgca taatgtaaac ttggtgtgca gagagaaaag 5221 gaaaaagaag aagaagtgag aaaaaagcga gaggagtgga gaaatcgaat ggaatttgtt 5281 gtcgcgttga tttaaatcta tataatgagt aaaatattgt atatttaaca atctatgaaa 5341 caaatatagt atgtagataa aacacacaca cacacataca cacgaacacg aacccataca 5401 agcatacatg gattaccgtt gcggtctaat tttatacaca caaacacaca agacaaatcg 5461 aattgcaaag gcaaataaat aattaaataa gaaagcgaaa aagaagaaga agcagaagcg 5521 gaaacggaag tgacgccaag aagaagaaga agcgagctgg agatgagatc aactcaaact 5581 agataactat acatatattt gctgattaat ttatatttat ataaaccaat ctacgattta 5641 tagccaacgc acagaaaaaa caaacaaaac acattcgaaa tttgttcgaa aaaatttagc 5701 aaaattcaag ttgagtgtta acattattat ccatgcgaat atgcttgaaa atattattat 5761 tttctactct gtccatcgtc tctcttgctt cccttcttac atacatactt actacttgaa 5821 acattttttt atttgtattt aatttttttt ttttatattg caaaaacgtc gcaaaaacga 5881 cgccacagca gcagcagcta tggatattat ttcaaaaata tatacatata actattgtac 5941 gaaataaaga gaatacaaat tgattataat tttcacaatg ta