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LOCUS XM_017155650 6057 bp mRNA linear INV 09-DEC-2024 variant X7, mRNA. ACCESSION XM_017155650 VERSION XM_017155650.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017155650.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6057 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..6057 /gene="dlg1" /note="discs large 1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108066907" CDS 35..3928 /gene="dlg1" /codon_start=1 /product="disks large 1 tumor suppressor protein isoform X7" /protein_id="XP_017011139.2" /db_xref="GeneID:108066907" /translation="MDSDTDDSEREKSSDPNEGLLSSDDKTFHDDDEEEDSSPADDEE EPEGEESLLPQQQKKAQPLVVLVESGSGEAIEEPTEEIEIDRVTLPIKEEREPDPEPE PSPLKHDSVRESVECFYSAQDLLEYGHMLSSSGGSIVRTPDVESGYFEKSESDEGGPP SSSSSLGAARCRLLSGISGLSPVSSSSSRHSAEGLRMELSRFRTMIETLERESLEKTK GKPKPRQRSQLQVESAGESGSDQGSEREMERGFWSTVFGQAGLEISQDEDERIADIKK AHRALELLEDYHARLSEPQDRALRIAIERVIRIFKSRLFQALLDIQEFYELTLLDDSK SIQQKTAETLQIATKWEKDGQAVKIADFIKTSNLNRNCAYEFNNDASSNQTNQSANQL NQNQIANNVSAQAQAEALSRTFKSELEEILNQRMRIESDTENAKEPPAEQQQQRSSRS PQQNPQQQQPQQQQQPQQQLGSKSRSGSQTVNGDDSWLYEDIQLERGNSGLGFSIAGG TDNPHIGTDTSIYITKLISGGAAAADGRLSINDIIVSVNEVSVVDVPHASAVDALKKA GNVVKLHVKRKRDTAATTPAAGSAAGDARDGGPKVMEIDLVKGGKGLGFSIAGGIGNQ HIPGDNGIYVTKLMDGGAAQVDGRLNIGDKLIAVRTNGSEKNLENVTHELAVATLKSI TDKVTLIIGKTQHLTTSASGGGGGGLSSGQQLSQSQSQLATSQSQSQVHQQQQQHQTP MVNSQSTEPGSRYASTNVLAAVPPGTPRAVSTEDITREPRTITIQKGPQGLGFNIVGG EDGQGIYVSFILAGGPADLGSELKRGDQLLSVNNVNLTHATHEEAAQALKTSGGVVTL LAQYRPEEYNRFEARIQELKQQAALGAGGSGTLLRTTQKRSLYVRALFDYDPNRDDGL PSRGLPFKHGDILHVTNASDDEWWQARRVLGDNEDEQIGIVPSKRRWERKMRARDRSV KFQGHAAANNNVDKQSTLDRKKKNFTFSRKFPFMKSRDEKNEDGSDQEPNGVVSSTSE LDINSVNNNQANEPQPFMLCYTQDDANAEGGEIIYRVELPDMEQITLIYLENSDADYP SEENVLSYEAVQRLSINYTRPVIILGPLKDRINDDLISEYPDKFGSCVPHTTRPKREY EVDGRDYHFVSSREQMERDIQNHLFIEAGQYNDNLYGTSVASVREVAEKGKHCILDVS GNAIKRLQVAQLYPVAVFIKPKSVDSVMEMNRRMTEEQAKKTYERAIKMEQEFGEYFT GVVQGDTIEEIYSKVKSMIWSQSGPTIWVPSKESL" misc_feature 863..1033 /gene="dlg1" /note="Region: L27_1; pfam09058" /db_xref="CDD:462665" misc_feature 1499..1765 /gene="dlg1" /note="PDZ domain 1 of human discs large homolog 1 (Dlg1), Dlg2, and Dlg4, Drosophila disc large (Dlg), and related domains; Region: PDZ1_Dlg1-2-4-like; cd06723" /db_xref="CDD:467206" misc_feature order(1532..1552,1601..1603,1610..1612,1700..1702, 1712..1714,1721..1726) /gene="dlg1" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:467206" misc_feature 1841..2107 /gene="dlg1" /note="PDZ domain 2 of human discs large homolog 1 (Dlg1), Dlg2, and Dlg4, Drosophila disc large (Dlg), and related domains; Region: PDZ2_Dlg1-2-4-like; cd06724" /db_xref="CDD:467207" misc_feature order(1868..1888,1937..1939,1946..1948,2048..2050, 2060..2062,2069..2074) /gene="dlg1" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:467207" misc_feature 2366..2638 /gene="dlg1" /note="PDZ domain 3 of human discs large homolog 1 (Dlg1), Dlg2, and Dlg4, Drosophila disc large (Dlg), and related domains; Region: PDZ3_Dlg1-2-4-like; cd06795" /db_xref="CDD:467257" misc_feature order(2402..2422,2453..2455,2462..2464,2552..2554, 2564..2566,2573..2578) /gene="dlg1" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:467257" misc_feature 2729..2911 /gene="dlg1" /note="Src Homology 3 domain of Disks large homolog proteins; Region: SH3_DLG-like; cd11861" /db_xref="CDD:212795" misc_feature order(2735..2737,2801..2806) /gene="dlg1" /note="GuK domain interface [polypeptide binding]; other site" /db_xref="CDD:212795" misc_feature order(2744..2746,2750..2752,2759..2761,2786..2788, 2840..2845,2900..2902,2906..2911) /gene="dlg1" /note="peptide ligand binding site [polypeptide binding]; other site" /db_xref="CDD:212795" misc_feature 3350..3886 /gene="dlg1" /note="Guanylate kinase; Region: Guanylate_kin; pfam00625" /db_xref="CDD:395500" polyA_site 6057 /gene="dlg1" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 agcgacggga cttgtagact tggggaccac aaaaatggat tcagacacgg atgattcgga 61 acgggagaag agcagcgatc ccaacgaggg tctgctgagc agcgatgata agacctttca 121 cgatgacgac gaggaggagg actcttcccc agccgacgat gaggaggagc ccgagggtga 181 ggagtccttg ctgccgcagc agcagaagaa agctcagcca ttggtggttc tggttgagtc 241 tggttcgggg gaagccatag aagaacctac tgaagaaatc gaaatcgatc gggtgacatt 301 acccattaaa gaagaaaggg aacccgatcc ggaacccgaa ccctcacccc tcaaacacga 361 cagtgtccgc gagtccgttg aatgcttcta ttccgcccag gatctcctgg aatatggcca 421 tatgctgtcc tcctccggag gctccatagt tcgaacgccg gacgtggagt cggggtattt 481 cgagaagtcc gagagcgatg agggtggacc tccttcgtcc tcctcctcgc tgggcgccgc 541 ccgctgtcgt ctgttgtccg gcatttcggg actctcgccc gtctcctcct cgtcgagccg 601 acacagtgcc gagggtctgc gaatggaact gagtcgtttc cgcaccatga tcgaaaccct 661 cgagcgggag agtctcgaga agaccaaggg caagccgaag cccaggcaga gatcccaatt 721 gcaggtggaa tcggcggggg aaagtggttc ggatcagggt tccgaaaggg agatggaaag 781 gggcttctgg tccacggtct tcggacaggc gggtctggag atcagtcagg atgaagacga 841 gcggattgcg gatattaaaa aagctcatcg ggctctcgag ctgctcgagg actatcacgc 901 caggctatcg gagccccagg atcgggcact gcgtattgca atcgaacgcg ttatacgcat 961 atttaaatct cgcttgtttc aagcgctgtt agatatacaa gaattctatg aattgacatt 1021 attggatgac tcgaagagca tacagcaaaa gacagcggag accttgcaaa ttgcaaccaa 1081 atgggagaag gacggacagg ccgttaaaat agccgatttt atcaaaactt caaatttaaa 1141 tcgcaattgc gcctatgagt ttaacaacga cgcctcatcc aatcaaacca accaatcagc 1201 caatcaactc aatcagaatc agatcgcgaa taatgtcagc gctcaggcgc aggccgaagc 1261 cctcagcaga acatttaaga gtgaattgga agagatcttg aatcagcgaa tgcgcatcga 1321 gtcggatacg gaaaatgcga aggagccacc ggctgagcag cagcagcagc gcagttcccg 1381 ctccccgcag cagaatccgc aacagcagca gccgcaacag caacagcagc cgcaacagca 1441 gctgggatcc aagtcaagga gcgggtcgca gactgtaaac ggcgatgata gctggttgta 1501 cgaggacatt cagctggagc gcggcaactc cggattggga ttctcgattg ccggcggcac 1561 ggataatccg cacatcggca ccgacacctc catctacatc accaagctaa tttccggcgg 1621 agcagctgcc gccgatggac ggctgagcat caacgacatt atcgtttcgg tgaacgaggt 1681 gtccgtggtg gatgtgccgc atgcctccgc cgtggatgcc ctgaaaaagg ccggcaatgt 1741 ggtcaagttg catgtgaagc gaaaacgtga cacggcggcc accactccgg ccgcaggatc 1801 ggcggctgga gatgcccgcg atggtggacc caaggtcatg gaaatcgatc tggtcaaggg 1861 cggcaaggga ttgggcttct cgattgccgg cggcattggc aaccagcaca tccccggcga 1921 caatggcatc tatgtgacca agctgatgga cggcggagcg gcgcaggtgg acggacgtct 1981 caatatcggc gacaaactca ttgcagtgcg caccaatggg agcgaaaaga atctggagaa 2041 cgtaacgcac gaactggcgg tggccacgct aaaatcgatc accgacaagg tgacgctgat 2101 cattgggaag acgcagcacc tgaccaccag tgcgtctggc ggcggaggag gaggcctctc 2161 atccggacag cagttgtcgc agtcgcagtc gcagttggcc accagccaga gccaaagtca 2221 ggtgcaccag cagcagcagc agcatcagac gccgatggtc aattcgcagt cgacagagcc 2281 cggctcgcga tatgcctcca caaatgtcct ggccgccgtt ccgccaggaa ctccgcgcgc 2341 agtcagcacc gaggatataa ccagagaacc gcgcaccatc accatacaga agggacccca 2401 gggcctgggc ttcaatatcg ttggcggcga ggatggccag ggcatctatg tgtccttcat 2461 cctggccggc ggtccagccg atctcggatc ggagctgaag cgcggcgacc agctgctcag 2521 cgtgaacaat gtcaatctca cgcatgccac ccacgaggag gcggcccagg cgctcaagac 2581 ttctggcggc gtggtgaccc tgctggcgca gtaccgaccc gaggagtaca accgcttcga 2641 ggcgcgcatc caggagctga aacagcaggc tgccctcggc gccggcggat cgggaaccct 2701 gctgcgcacc acgcagaagc gatcgctcta tgtgcgcgcc ctgttcgact acgatcccaa 2761 tcgggacgac ggcctgccct cgcggggatt gcccttcaag cacggcgaca tcctgcacgt 2821 gaccaatgcc tccgacgacg aatggtggca ggcgcgacgc gttctcggcg acaacgagga 2881 cgagcagatc ggcattgtgc cgtcgaagag gcgctgggag cgcaagatgc gggctcggga 2941 tcgcagcgtc aagttccagg gccatgcggc agccaataat aatgtggata agcaatcgac 3001 attggatcga aagaaaaaga atttcacatt ctcgcgcaaa tttccgttta tgaagagtcg 3061 cgatgagaag aatgaagatg gcagcgacca agagcccaat ggagttgtga gcagcaccag 3121 cgaactcgac atcaatagtg tcaacaacaa tcaggcgaat gaaccgcaac cctttatgct 3181 ttgctacaca caagacgatg ccaatgctga aggaggcgag attatctaca gggtggagtt 3241 acccgatatg gagcagataa ctctgatcta cttggagaat agtgatgcgg actatccttc 3301 cgaggagaac gtcctgtcct acgaggccgt gcagcgcctg tccatcaact acacgcgccc 3361 tgtgattatt ctggggccgc tgaaggatcg catcaacgat gacctaatat cggagtatcc 3421 cgacaagttt ggatcctgtg tgccacacac cacccgaccc aagcgggagt acgaggtgga 3481 cggcagggac tatcactttg tgtcctcgcg cgagcaaatg gagcgggaca tccagaacca 3541 tctgttcatc gaggcgggcc aatataacga caatctgtac ggcacatcgg tggccagtgt 3601 gcgcgaggtg gcggagaagg gcaagcactg catcctggac gtgtccggga atgccataaa 3661 gcgcctccag gtggcccagc tctatcccgt tgcagtgttc atcaagccca agtcggtgga 3721 ttcggtgatg gagatgaatc gtcgcatgac ggaggagcag gccaagaaga cgtacgagcg 3781 ggcgattaaa atggagcagg aattcggcga atactttacc ggcgttgtcc agggcgacac 3841 catcgaggag atctacagca aagtgaagtc gatgatttgg tcccagtcgg gaccaaccat 3901 ttgggtacct tccaaggaat ctctatgacc aacagccacc acaacttgga cactgccgcc 3961 tcgagttcga tgccgaccgg tctcgagaac aacaatagga gcaacggcgg cagcagcaac 4021 aaatcagcag ccgcactgat gatgcatcac agtagcaaca acagaagcag caacagcaac 4081 aacaactact acaacagcag aagcagccac agcaacagca acaacaacaa ctacagtact 4141 actgacaacg acaggaaacg gaaacagaaa ctagaaaacc agaaaacaga accactgact 4201 acttagaaac ttaaccgaca gacagtaaaa tttatattga cgcagccgca gcagccaact 4261 taatgtagca aattgtccaa agcaatttta tttggatgca ctcattgatg tacggtcagg 4321 tgaacgtaca tcccagcagc tagacgagga tgggcgaaca tcagagcaaa gcatttggca 4381 tttggcaacg tagggaagat gagatgatga gatgggtgtt caaactgaag cggacaaagg 4441 tgtatagttt ttagttagaa caaagttgga tataaacaaa aaaaaaagat aaagaagcga 4501 aatatataat atatatacac accacttata tagactaaga tccgattata taaaagcata 4561 gagatgatca gacgaggaga cgagggcttt agggagttcg ttaagcgcta gagtgttgtt 4621 tgtttatgtt gatgtttata tacgagagcc aagagttata gcgagttagt tatgttgacg 4681 ataatgtgtt ttttgatata tattgatcta tatgaaatat gtattgcctg gtggttaact 4741 ttaagtacga caatgtttag tagctgacta cgaataatga cgacgataat gacgggacgc 4801 agatgcggag gcggatgcga atgcggatgc ggttacggtt gcggatctag cggaaagtca 4861 gataatgacg agaataacga tttacgatta cgattacgat ctaatgataa tgatataata 4921 tatatattga tgaatatcga agctaataac gagatgaaga agaacgttgg tgcatttgtt 4981 gttagatgta tgtaattttt cccactcgcc tttgcctaaa gcaacacaaa agtaaaaaaa 5041 aagtaaaaaa accaagaaga aaacagaaaa ctaaaccgaa atcaataaac atgcgtatga 5101 taaatactag aaactagcgg aaaagttgca tataaaacca tagacattca ttcacacatc 5161 tacttactat atatatatat atatctgtac catttagcct atagtccgca agagatcgtc 5221 gaaacaaagt cattttacta tataaatata cacaaaacac ccgcataatg taaacttggt 5281 gtgcagagag aaaaggaaaa agaagaagaa gtgagaaaaa agcgagagga gtggagaaat 5341 cgaatggaat ttgttgtcgc gttgatttaa atctatataa tgagtaaaat attgtatatt 5401 taacaatcta tgaaacaaat atagtatgta gataaaacac acacacacac atacacacga 5461 acacgaaccc atacaagcat acatggatta ccgttgcggt ctaattttat acacacaaac 5521 acacaagaca aatcgaattg caaaggcaaa taaataatta aataagaaag cgaaaaagaa 5581 gaagaagcag aagcggaaac ggaagtgacg ccaagaagaa gaagaagcga gctggagatg 5641 agatcaactc aaactagata actatacata tatttgctga ttaatttata tttatataaa 5701 ccaatctacg atttatagcc aacgcacaga aaaaacaaac aaaacacatt cgaaatttgt 5761 tcgaaaaaat ttagcaaaat tcaagttgag tgttaacatt attatccatg cgaatatgct 5821 tgaaaatatt attattttct actctgtcca tcgtctctct tgcttccctt cttacataca 5881 tacttactac ttgaaacatt tttttatttg tatttaattt ttttttttta tattgcaaaa 5941 acgtcgcaaa aacgacgcca cagcagcagc agctatggat attatttcaa aaatatatac 6001 atataactat tgtacgaaat aaagagaata caaattgatt ataattttca caatgta